RNA–Protein interactions for RNA: ENST00000480209.1

NUDCD3-208, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-208ENST00000480209 GDF5OSQ5U4N7 250 aa6.67□□□□□ -1.34
NUDCD3-208ENST00000480209 LINC00528Q8N1L1 170 aa6.67□□□□□ -1.34
NUDCD3-208ENST00000480209 SLC50A1Q9BRV3 221 aa6.67□□□□□ -1.34
NUDCD3-208ENST00000480209 MANBALQ9NQG1 85 aa6.67□□□□□ -1.34
NUDCD3-208ENST00000480209 C19orf73Q9NVV2 129 aa6.67□□□□□ -1.34
NUDCD3-208ENST00000480209 RPH3ALQ9UNE2 315 aa6.67□□□□□ -1.34
NUDCD3-208ENST00000480209 ARL2-SNX15V9GYD0 113 aa6.67□□□□□ -1.34
NUDCD3-208ENST00000480209 NOTCH1P46531 2555 aa6.67□□□□□ -1.34
NUDCD3-208ENST00000480209 IGKV2-40A0A087WW87 121 aaPredicted RBP6.66□□□□□ -1.34
NUDCD3-208ENST00000480209 LINC00862A6NCI5 91 aa6.66□□□□□ -1.34
NUDCD3-208ENST00000480209 PGPA6NDG6 321 aa6.66□□□□□ -1.34
NUDCD3-208ENST00000480209 OR4C46A6NHA9 309 aa6.66□□□□□ -1.34
NUDCD3-208ENST00000480209 C11orf94C9JXX5 98 aa6.66□□□□□ -1.34
NUDCD3-208ENST00000480209 DNASE2O00115 360 aaPredicted RBP6.66□□□□□ -1.34
NUDCD3-208ENST00000480209 IFNA1P01562 189 aa6.66□□□□□ -1.34
NUDCD3-208ENST00000480209 IGKV2D-40P01614 121 aaPredicted RBP6.66□□□□□ -1.34
NUDCD3-208ENST00000480209 ZNF705DP0CH99 300 aaPredicted RBP6.66□□□□□ -1.34
NUDCD3-208ENST00000480209 ZNF705BP0CI00 300 aaPredicted RBP6.66□□□□□ -1.34
NUDCD3-208ENST00000480209 SUMO1P63165 101 aaKnown RBP6.66□□□□□ -1.34
NUDCD3-208ENST00000480209 PSG9Q00887 426 aa6.66□□□□□ -1.34
NUDCD3-208ENST00000480209 EGFEM1PQ0D2K5 195 aa6.66□□□□□ -1.34
NUDCD3-208ENST00000480209 PSG3Q16557 428 aa6.66□□□□□ -1.34
NUDCD3-208ENST00000480209 PSMG4Q5JS54 123 aa6.66□□□□□ -1.34
NUDCD3-208ENST00000480209 CST9LP1Q5W188 147 aa6.66□□□□□ -1.34
NUDCD3-208ENST00000480209 RXFP4Q8TDU9 374 aa6.66□□□□□ -1.34
NUDCD3-208ENST00000480209 RBFOX3A6NFN3 312 aa6.65□□□□□ -1.34
NUDCD3-208ENST00000480209 EREGO14944 169 aa6.65□□□□□ -1.34
NUDCD3-208ENST00000480209 SLC25A5P05141 298 aaKnown RBP6.65□□□□□ -1.34
NUDCD3-208ENST00000480209 PPT1P50897 306 aa6.65□□□□□ -1.34
NUDCD3-208ENST00000480209 DEFB131AP59861 70 aa6.65□□□□□ -1.34
NUDCD3-208ENST00000480209 PAFAH1B2P68402 229 aa6.65□□□□□ -1.34
NUDCD3-208ENST00000480209 MEF2BQ02080 365 aaPredicted RBP6.65□□□□□ -1.34
NUDCD3-208ENST00000480209 COMMD7Q86VX2 200 aa6.65□□□□□ -1.34
NUDCD3-208ENST00000480209 APRG1Q8IVJ8 170 aa6.65□□□□□ -1.34
NUDCD3-208ENST00000480209 LYPD1Q8N2G4 141 aa6.65□□□□□ -1.34
NUDCD3-208ENST00000480209 C5orf17Q8NAS9 161 aa6.65□□□□□ -1.34
NUDCD3-208ENST00000480209 ZNF738Q8NE65 137 aa6.65□□□□□ -1.34
NUDCD3-208ENST00000480209 RPUSD4Q96CM3 377 aaKnown RBP6.65□□□□□ -1.34
NUDCD3-208ENST00000480209 MRPL53Q96EL3 112 aaKnown RBP6.65□□□□□ -1.34
NUDCD3-208ENST00000480209 LINC00052Q96N35 136 aa6.65□□□□□ -1.34
NUDCD3-208ENST00000480209 PRR25Q96S07 402 aa6.65□□□□□ -1.34
NUDCD3-208ENST00000480209 ASCL2Q99929 193 aa6.65□□□□□ -1.34
NUDCD3-208ENST00000480209 DERL1Q9BUN8 251 aa6.65□□□□□ -1.34
NUDCD3-208ENST00000480209 AAMDCQ9H7C9 122 aa6.65□□□□□ -1.34
NUDCD3-208ENST00000480209 MED9Q9NWA0 146 aa6.65□□□□□ -1.34
NUDCD3-208ENST00000480209 VAX2Q9UIW0 290 aa6.65□□□□□ -1.34
NUDCD3-208ENST00000480209 RBMY1BA6NDE4 496 aaKnown RBP6.64□□□□□ -1.35
NUDCD3-208ENST00000480209 RBMY1EA6NEQ0 496 aaKnown RBP6.64□□□□□ -1.35
NUDCD3-208ENST00000480209 KNCNA6PVL3 124 aa6.64□□□□□ -1.35
NUDCD3-208ENST00000480209 DIRC3C9JPN6 131 aa6.64□□□□□ -1.35
NUDCD3-208ENST00000480209 PEX7O00628 323 aa6.64□□□□□ -1.35
NUDCD3-208ENST00000480209 TCRAP04437 139 aa6.64□□□□□ -1.35
NUDCD3-208ENST00000480209 RBMY1DP0C7P1 496 aaKnown RBP6.64□□□□□ -1.35
NUDCD3-208ENST00000480209 SAMD13Q5VXD3 122 aa6.64□□□□□ -1.35
NUDCD3-208ENST00000480209 GOLT1AQ6ZVE7 132 aa6.64□□□□□ -1.35
NUDCD3-208ENST00000480209 Q8N1Y9 231 aa6.64□□□□□ -1.35
NUDCD3-208ENST00000480209 C2CD4CQ8TF44 421 aa6.64□□□□□ -1.35
NUDCD3-208ENST00000480209 C11orf52Q96A22 123 aa6.64□□□□□ -1.35
NUDCD3-208ENST00000480209 LINC00479Q96M42 142 aa6.64□□□□□ -1.35
NUDCD3-208ENST00000480209 EPDR1Q9UM22 224 aa6.64□□□□□ -1.35
NUDCD3-208ENST00000480209 NBEAL1Q6ZS30 2694 aa6.64□□□□□ -1.35
NUDCD3-208ENST00000480209 TRAV8-1A0A0A6YYK1 113 aa6.63□□□□□ -1.35
NUDCD3-208ENST00000480209 TRAV34A0A0B4J273 112 aa6.63□□□□□ -1.35
NUDCD3-208ENST00000480209 IGLV2-11P01706 119 aa6.63□□□□□ -1.35
NUDCD3-208ENST00000480209 SRP19P09132 144 aaKnown RBP6.63□□□□□ -1.35
NUDCD3-208ENST00000480209 ID1P41134 155 aa6.63□□□□□ -1.35
NUDCD3-208ENST00000480209 SNRPD3P62318 126 aaKnown RBP6.63□□□□□ -1.35
NUDCD3-208ENST00000480209 ERCC8Q13216 396 aa6.63□□□□□ -1.35
NUDCD3-208ENST00000480209 KPRPQ5T749 579 aaPredicted RBP6.63□□□□□ -1.35
NUDCD3-208ENST00000480209 Q8TAT8 98 aa6.63□□□□□ -1.35
NUDCD3-208ENST00000480209 SGK494Q96LW2 274 aa6.63□□□□□ -1.35
NUDCD3-208ENST00000480209 VGLL1Q99990 258 aa6.63□□□□□ -1.35
NUDCD3-208ENST00000480209 GPR61Q9BZJ8 451 aa6.63□□□□□ -1.35
NUDCD3-208ENST00000480209 EIF5A2Q9GZV4 153 aaKnown RBP6.63□□□□□ -1.35
NUDCD3-208ENST00000480209 SAV1Q9H4B6 383 aaPredicted RBP6.63□□□□□ -1.35
NUDCD3-208ENST00000480209 PRELID1Q9Y255 219 aa6.63□□□□□ -1.35
NUDCD3-208ENST00000480209 TRBV20OR9-2A0A075B6H5 130 aa6.62□□□□□ -1.35
NUDCD3-208ENST00000480209 A0A0J9YX75 114 aa6.62□□□□□ -1.35
NUDCD3-208ENST00000480209 RAB19A4D1S5 217 aa6.62□□□□□ -1.35
NUDCD3-208ENST00000480209 OR11H12B2RN74 326 aa6.62□□□□□ -1.35
NUDCD3-208ENST00000480209 NPIPB6E9PJ23 425 aa6.62□□□□□ -1.35
NUDCD3-208ENST00000480209 PRB2P02812 416 aaPredicted RBP6.62□□□□□ -1.35
NUDCD3-208ENST00000480209 Q86TA4 180 aa6.62□□□□□ -1.35
NUDCD3-208ENST00000480209 DEFB125Q8N687 156 aa6.62□□□□□ -1.35
NUDCD3-208ENST00000480209 CYB561D1Q8N8Q1 229 aa6.62□□□□□ -1.35
NUDCD3-208ENST00000480209 OR8A1Q8NGG7 326 aa6.62□□□□□ -1.35
NUDCD3-208ENST00000480209 CMTM2Q8TAZ6 248 aa6.62□□□□□ -1.35
NUDCD3-208ENST00000480209 ATG101Q9BSB4 218 aa6.62□□□□□ -1.35
NUDCD3-208ENST00000480209 A8MTW9 85 aa6.61□□□□□ -1.35
NUDCD3-208ENST00000480209 F6UZH7 168 aa6.61□□□□□ -1.35
NUDCD3-208ENST00000480209 PDE6DO43924 150 aa6.61□□□□□ -1.35
NUDCD3-208ENST00000480209 IGKV3-20P01619 116 aa6.61□□□□□ -1.35
NUDCD3-208ENST00000480209 HLA-DRB4P13762 266 aa6.61□□□□□ -1.35
NUDCD3-208ENST00000480209 ADCYAP1P18509 176 aa6.61□□□□□ -1.35
NUDCD3-208ENST00000480209 TAGLN2P37802 199 aaKnown RBP6.61□□□□□ -1.35
NUDCD3-208ENST00000480209 CNN1P51911 297 aaKnown RBP6.61□□□□□ -1.35
NUDCD3-208ENST00000480209 HIST1H1AQ02539 215 aaPredicted RBP6.61□□□□□ -1.35
NUDCD3-208ENST00000480209 KIR3DS1Q14943 382 aa6.61□□□□□ -1.35
NUDCD3-208ENST00000480209 ACTL10Q5JWF8 245 aa6.61□□□□□ -1.35
NUDCD3-208ENST00000480209 PRR9Q5T870 116 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms