RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 NDUFS6O75380 124 aaKnown RBP9.32□□□□□ -0.92
TRAPPC12-218ENST00000479897 HLA-DMBP28068 263 aa9.32□□□□□ -0.92
TRAPPC12-218ENST00000479897 DEFB131AP59861 70 aa9.32□□□□□ -0.92
TRAPPC12-218ENST00000479897 IGFL4Q6B9Z1 124 aa9.32□□□□□ -0.92
TRAPPC12-218ENST00000479897 FOXI2Q6ZQN5 318 aa9.32□□□□□ -0.92
TRAPPC12-218ENST00000479897 CCDC28AQ8IWP9 274 aa9.32□□□□□ -0.92
TRAPPC12-218ENST00000479897 RXFP4Q8TDU9 374 aa9.32□□□□□ -0.92
TRAPPC12-218ENST00000479897 GNG13Q9P2W3 67 aa9.32□□□□□ -0.92
TRAPPC12-218ENST00000479897 SERTM2A0A1B0GWG4 89 aa9.31□□□□□ -0.92
TRAPPC12-218ENST00000479897 PGPA6NDG6 321 aa9.31□□□□□ -0.92
TRAPPC12-218ENST00000479897 M0R3E3 92 aa9.31□□□□□ -0.92
TRAPPC12-218ENST00000479897 UBE2G2P60604 165 aa9.31□□□□□ -0.92
TRAPPC12-218ENST00000479897 Q8N1Y9 231 aa9.31□□□□□ -0.92
TRAPPC12-218ENST00000479897 ZNF738Q8NE65 137 aa9.31□□□□□ -0.92
TRAPPC12-218ENST00000479897 PCNPQ8WW12 178 aaKnown RBP9.31□□□□□ -0.92
TRAPPC12-218ENST00000479897 RPUSD4Q96CM3 377 aaKnown RBP9.31□□□□□ -0.92
TRAPPC12-218ENST00000479897 FAM210AQ96ND0 272 aa9.31□□□□□ -0.92
TRAPPC12-218ENST00000479897 SAV1Q9H4B6 383 aaPredicted RBP9.31□□□□□ -0.92
TRAPPC12-218ENST00000479897 A0A0J9YX75 114 aa9.3□□□□□ -0.92
TRAPPC12-218ENST00000479897 LOC102723971A0A1B0GUV8 181 aa9.3□□□□□ -0.92
TRAPPC12-218ENST00000479897 RBAKDNA6NC62 111 aa9.3□□□□□ -0.92
TRAPPC12-218ENST00000479897 A8MTW9 85 aa9.3□□□□□ -0.92
TRAPPC12-218ENST00000479897 SLC25A5P05141 298 aaKnown RBP9.3□□□□□ -0.92
TRAPPC12-218ENST00000479897 HLA-DRB4P13762 266 aa9.3□□□□□ -0.92
TRAPPC12-218ENST00000479897 CSN1S1P47710 185 aa9.3□□□□□ -0.92
TRAPPC12-218ENST00000479897 SUMO1P63165 101 aaKnown RBP9.3□□□□□ -0.92
TRAPPC12-218ENST00000479897 MEF2BQ02080 365 aaPredicted RBP9.3□□□□□ -0.92
TRAPPC12-218ENST00000479897 ZNF506Q5JVG8 444 aa9.3□□□□□ -0.92
TRAPPC12-218ENST00000479897 CMTM2Q8TAZ6 248 aa9.3□□□□□ -0.92
TRAPPC12-218ENST00000479897 LINC00052Q96N35 136 aa9.3□□□□□ -0.92
TRAPPC12-218ENST00000479897 CLUHP3Q96NS8 147 aa9.3□□□□□ -0.92
TRAPPC12-218ENST00000479897 PRR25Q96S07 402 aa9.3□□□□□ -0.92
TRAPPC12-218ENST00000479897 HLA-DRB4X5D2U9 266 aa9.3□□□□□ -0.92
TRAPPC12-218ENST00000479897 A8MZ25 164 aa9.29□□□□□ -0.92
TRAPPC12-218ENST00000479897 DIRC3C9JPN6 131 aa9.29□□□□□ -0.92
TRAPPC12-218ENST00000479897 C11orf94C9JXX5 98 aa9.29□□□□□ -0.92
TRAPPC12-218ENST00000479897 TCRAP04437 139 aa9.29□□□□□ -0.92
TRAPPC12-218ENST00000479897 ATP5G3P48201 142 aa9.29□□□□□ -0.92
TRAPPC12-218ENST00000479897 CST9LP1Q5W188 147 aa9.29□□□□□ -0.92
TRAPPC12-218ENST00000479897 OR8A1Q8NGG7 326 aa9.29□□□□□ -0.92
TRAPPC12-218ENST00000479897 HIST1H2BAQ96A08 127 aa9.29□□□□□ -0.92
TRAPPC12-218ENST00000479897 C11orf52Q96A22 123 aa9.29□□□□□ -0.92
TRAPPC12-218ENST00000479897 ATG101Q9BSB4 218 aa9.29□□□□□ -0.92
TRAPPC12-218ENST00000479897 MED9Q9NWA0 146 aa9.29□□□□□ -0.92
TRAPPC12-218ENST00000479897 VAX2Q9UIW0 290 aa9.29□□□□□ -0.92
TRAPPC12-218ENST00000479897 EPDR1Q9UM22 224 aa9.29□□□□□ -0.92
TRAPPC12-218ENST00000479897 AGRNO00468 2067 aa9.28□□□□□ -0.92
TRAPPC12-218ENST00000479897 RBFOX3A6NFN3 312 aa9.28□□□□□ -0.92
TRAPPC12-218ENST00000479897 ZNF705FA8MVS1 300 aaPredicted RBP9.28□□□□□ -0.92
TRAPPC12-218ENST00000479897 NPIPB6E9PJ23 425 aa9.28□□□□□ -0.92
TRAPPC12-218ENST00000479897 HAGHQ16775 308 aa9.28□□□□□ -0.92
TRAPPC12-218ENST00000479897 EBLN2Q6P2I7 272 aa9.28□□□□□ -0.92
TRAPPC12-218ENST00000479897 APRG1Q8IVJ8 170 aa9.28□□□□□ -0.92
TRAPPC12-218ENST00000479897 CYB561D1Q8N8Q1 229 aa9.28□□□□□ -0.92
TRAPPC12-218ENST00000479897 CITED4Q96RK1 184 aa9.28□□□□□ -0.92
TRAPPC12-218ENST00000479897 WFDC10AQ9H1F0 79 aa9.28□□□□□ -0.92
TRAPPC12-218ENST00000479897 FBLL1A6NHQ2 334 aaKnown RBP9.27□□□□□ -0.93
TRAPPC12-218ENST00000479897 PRAC2D3DTV9 90 aa9.27□□□□□ -0.93
TRAPPC12-218ENST00000479897 F6UZH7 168 aa9.27□□□□□ -0.93
TRAPPC12-218ENST00000479897 H3BMM0 161 aa9.27□□□□□ -0.93
TRAPPC12-218ENST00000479897 PEX7O00628 323 aa9.27□□□□□ -0.93
TRAPPC12-218ENST00000479897 PDE6DO43924 150 aa9.27□□□□□ -0.93
TRAPPC12-218ENST00000479897 DUSP14O95147 198 aaKnown RBP9.27□□□□□ -0.93
TRAPPC12-218ENST00000479897 GNG5P63218 68 aa9.27□□□□□ -0.93
TRAPPC12-218ENST00000479897 ZNF124Q15973 351 aa9.27□□□□□ -0.93
TRAPPC12-218ENST00000479897 TOR2AQ5JU69 321 aa9.27□□□□□ -0.93
TRAPPC12-218ENST00000479897 GDF5OSQ5U4N7 250 aa9.27□□□□□ -0.93
TRAPPC12-218ENST00000479897 C9orf47Q6ZRZ4 202 aa9.27□□□□□ -0.93
TRAPPC12-218ENST00000479897 TRPT1Q86TN4 253 aaKnown RBP9.27□□□□□ -0.93
TRAPPC12-218ENST00000479897 ODF3Q96PU9 254 aa9.27□□□□□ -0.93
TRAPPC12-218ENST00000479897 SMDT1Q9H4I9 107 aa9.27□□□□□ -0.93
TRAPPC12-218ENST00000479897 AURKAIP1Q9NWT8 199 aaPredicted RBP9.27□□□□□ -0.93
TRAPPC12-218ENST00000479897 PPP1R14DQ9NXH3 145 aa9.27□□□□□ -0.93
TRAPPC12-218ENST00000479897 IGKV2-40A0A087WW87 121 aaPredicted RBP9.26□□□□□ -0.93
TRAPPC12-218ENST00000479897 TRBV7-9A0A0J9YWB2 115 aa9.26□□□□□ -0.93
TRAPPC12-218ENST00000479897 RAB19A4D1S5 217 aa9.26□□□□□ -0.93
TRAPPC12-218ENST00000479897 KNCNA6PVL3 124 aa9.26□□□□□ -0.93
TRAPPC12-218ENST00000479897 F6UB75 175 aa9.26□□□□□ -0.93
TRAPPC12-218ENST00000479897 TMEM250H0YL14 139 aa9.26□□□□□ -0.93
TRAPPC12-218ENST00000479897 K7EQM0 130 aa9.26□□□□□ -0.93
TRAPPC12-218ENST00000479897 IGKV2D-40P01614 121 aaPredicted RBP9.26□□□□□ -0.93
TRAPPC12-218ENST00000479897 CNN1P51911 297 aaKnown RBP9.26□□□□□ -0.93
TRAPPC12-218ENST00000479897 DEFB1P60022 68 aa9.26□□□□□ -0.93
TRAPPC12-218ENST00000479897 HIST1H1AQ02539 215 aaPredicted RBP9.26□□□□□ -0.93
TRAPPC12-218ENST00000479897 ACTL10Q5JWF8 245 aa9.26□□□□□ -0.93
TRAPPC12-218ENST00000479897 GOLT1AQ6ZVE7 132 aa9.26□□□□□ -0.93
TRAPPC12-218ENST00000479897 DEFB125Q8N687 156 aa9.26□□□□□ -0.93
TRAPPC12-218ENST00000479897 TMEM75Q8N9X5 138 aa9.26□□□□□ -0.93
TRAPPC12-218ENST00000479897 OR10J6PQ8NGY7 276 aa9.26□□□□□ -0.93
TRAPPC12-218ENST00000479897 C2CD4CQ8TF44 421 aa9.26□□□□□ -0.93
TRAPPC12-218ENST00000479897 SRD5A3Q9H8P0 318 aa9.26□□□□□ -0.93
TRAPPC12-218ENST00000479897 TRBV6-1A0A0K0K1D8 114 aa9.25□□□□□ -0.93
TRAPPC12-218ENST00000479897 SCO2A0A1W2PP80 73 aa9.25□□□□□ -0.93
TRAPPC12-218ENST00000479897 LINC00862A6NCI5 91 aa9.25□□□□□ -0.93
TRAPPC12-218ENST00000479897 AMTNQ6UX39 209 aa9.25□□□□□ -0.93
TRAPPC12-218ENST00000479897 STHQ8IWL8 128 aa9.25□□□□□ -0.93
TRAPPC12-218ENST00000479897 LINC00477Q96M19 166 aa9.25□□□□□ -0.93
TRAPPC12-218ENST00000479897 RARRES2Q99969 163 aa9.25□□□□□ -0.93
TRAPPC12-218ENST00000479897 EIF5A2Q9GZV4 153 aaKnown RBP9.25□□□□□ -0.93
TRAPPC12-218ENST00000479897 KLF12Q9Y4X4 402 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms