RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 CCDC179H3BU77 68 aa1.87□□□□□ -2.11
SMARCA1-204ENST00000478420 OR1I1O60431 355 aa1.87□□□□□ -2.11
SMARCA1-204ENST00000478420 IGLV1-51P01701 117 aa1.87□□□□□ -2.11
SMARCA1-204ENST00000478420 FABP4P15090 132 aa1.87□□□□□ -2.11
SMARCA1-204ENST00000478420 FGF7P21781 194 aa1.87□□□□□ -2.11
SMARCA1-204ENST00000478420 ZNF93P35789 620 aaPredicted RBP1.87□□□□□ -2.11
SMARCA1-204ENST00000478420 ROMO1P60602 79 aa1.87□□□□□ -2.11
SMARCA1-204ENST00000478420 ESRGQ1W209 222 aa1.87□□□□□ -2.11
SMARCA1-204ENST00000478420 MEIG1Q5JSS6 88 aa1.87□□□□□ -2.11
SMARCA1-204ENST00000478420 IZUMO2Q6UXV1 221 aa1.87□□□□□ -2.11
SMARCA1-204ENST00000478420 SNX29P2Q8IUI4 249 aa1.87□□□□□ -2.11
SMARCA1-204ENST00000478420 PP6455Q8WZ26 134 aa1.87□□□□□ -2.11
SMARCA1-204ENST00000478420 POP5Q969H6 163 aaKnown RBP1.87□□□□□ -2.11
SMARCA1-204ENST00000478420 TVP23CQ96ET8 276 aa1.87□□□□□ -2.11
SMARCA1-204ENST00000478420 NHP2Q9NX24 153 aaKnown RBP1.87□□□□□ -2.11
SMARCA1-204ENST00000478420 KIAA1107Q9UPP5 1409 aa1.87□□□□□ -2.11
SMARCA1-204ENST00000478420 LSM2Q9Y333 95 aaKnown RBP1.87□□□□□ -2.11
SMARCA1-204ENST00000478420 CITO14578 2027 aa1.86□□□□□ -2.11
SMARCA1-204ENST00000478420 IGHV3-64A0A075B6Q5 118 aa1.86□□□□□ -2.11
SMARCA1-204ENST00000478420 IGKV2D-26A0A0A0MRZ7 120 aa1.86□□□□□ -2.11
SMARCA1-204ENST00000478420 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.86□□□□□ -2.11
SMARCA1-204ENST00000478420 OR51F1A6NGY5 319 aa1.86□□□□□ -2.11
SMARCA1-204ENST00000478420 BBIP1A8MTZ0 92 aa1.86□□□□□ -2.11
SMARCA1-204ENST00000478420 SYNGR2O43760 224 aa1.86□□□□□ -2.11
SMARCA1-204ENST00000478420 CD3DP04234 171 aa1.86□□□□□ -2.11
SMARCA1-204ENST00000478420 CD14P08571 375 aa1.86□□□□□ -2.11
SMARCA1-204ENST00000478420 AKAIN1P0CW23 69 aa1.86□□□□□ -2.11
SMARCA1-204ENST00000478420 SLC25A4P12235 298 aa1.86□□□□□ -2.11
SMARCA1-204ENST00000478420 CCL4P13236 92 aa1.86□□□□□ -2.11
SMARCA1-204ENST00000478420 TPT1P13693 172 aaKnown RBP1.86□□□□□ -2.11
SMARCA1-204ENST00000478420 HRES1P13985 223 aa1.86□□□□□ -2.11
SMARCA1-204ENST00000478420 BLCAPP62952 87 aa1.86□□□□□ -2.11
SMARCA1-204ENST00000478420 MRPS36P82909 103 aaKnown RBP1.86□□□□□ -2.11
SMARCA1-204ENST00000478420 SS18Q15532 418 aa1.86□□□□□ -2.11
SMARCA1-204ENST00000478420 CLLU1Q5K131 121 aa1.86□□□□□ -2.11
SMARCA1-204ENST00000478420 Q8N2B8 174 aa1.86□□□□□ -2.11
SMARCA1-204ENST00000478420 Q8N814 137 aa1.86□□□□□ -2.11
SMARCA1-204ENST00000478420 CLEC2BQ92478 149 aa1.86□□□□□ -2.11
SMARCA1-204ENST00000478420 DPH3Q96FX2 82 aa1.86□□□□□ -2.11
SMARCA1-204ENST00000478420 LINC00467Q9BRT7 94 aa1.86□□□□□ -2.11
SMARCA1-204ENST00000478420 HIGD2AQ9BW72 106 aa1.86□□□□□ -2.11
SMARCA1-204ENST00000478420 SLC35B3Q9H1N7 401 aa1.86□□□□□ -2.11
SMARCA1-204ENST00000478420 CCDC167Q9P0B6 97 aa1.86□□□□□ -2.11
SMARCA1-204ENST00000478420 ZFP30Q9Y2G7 519 aa1.86□□□□□ -2.11
SMARCA1-204ENST00000478420 SDK2Q58EX2 2172 aa1.86□□□□□ -2.11
SMARCA1-204ENST00000478420 CDK5RAP2Q96SN8 1893 aa1.86□□□□□ -2.11
SMARCA1-204ENST00000478420 COL5A1P20908 1838 aaPredicted RBP1.85□□□□□ -2.11
SMARCA1-204ENST00000478420 A0A1W2PNM2 257 aa1.85□□□□□ -2.11
SMARCA1-204ENST00000478420 CDC42EP2O14613 210 aa1.85□□□□□ -2.11
SMARCA1-204ENST00000478420 PSCAO43653 123 aa1.85□□□□□ -2.11
SMARCA1-204ENST00000478420 PITX3O75364 302 aa1.85□□□□□ -2.11
SMARCA1-204ENST00000478420 PPP3R1P63098 170 aa1.85□□□□□ -2.11
SMARCA1-204ENST00000478420 ZNF345Q14585 488 aa1.85□□□□□ -2.11
SMARCA1-204ENST00000478420 TEX261Q6UWH6 196 aa1.85□□□□□ -2.11
SMARCA1-204ENST00000478420 C20orf166-AS1Q96NR2 134 aa1.85□□□□□ -2.11
SMARCA1-204ENST00000478420 CIB3Q96Q77 187 aaPredicted RBP1.85□□□□□ -2.11
SMARCA1-204ENST00000478420 NABP2Q9BQ15 211 aa1.85□□□□□ -2.11
SMARCA1-204ENST00000478420 SNRNP25Q9BV90 132 aaKnown RBP1.85□□□□□ -2.11
SMARCA1-204ENST00000478420 TAS2R4Q9NYW5 299 aa1.85□□□□□ -2.11
SMARCA1-204ENST00000478420 PTPRSQ13332 1948 aa1.85□□□□□ -2.11
SMARCA1-204ENST00000478420 CCDC88AQ3V6T2 1871 aa1.84□□□□□ -2.11
SMARCA1-204ENST00000478420 MALRD1Q5VYJ5 2156 aa1.84□□□□□ -2.11
SMARCA1-204ENST00000478420 TRBV20-1A0A075B6N2 111 aa1.84□□□□□ -2.11
SMARCA1-204ENST00000478420 TRAV1-1A0A0B4J248 108 aa1.84□□□□□ -2.11
SMARCA1-204ENST00000478420 ODF3BA8MYP8 253 aa1.84□□□□□ -2.11
SMARCA1-204ENST00000478420 CCL25O15444 150 aa1.84□□□□□ -2.11
SMARCA1-204ENST00000478420 SNAPC5O75971 98 aa1.84□□□□□ -2.11
SMARCA1-204ENST00000478420 P0C880 135 aa1.84□□□□□ -2.11
SMARCA1-204ENST00000478420 PYYP10082 97 aa1.84□□□□□ -2.11
SMARCA1-204ENST00000478420 MGST1P10620 155 aaKnown RBP1.84□□□□□ -2.11
SMARCA1-204ENST00000478420 HIST1H1BP16401 226 aaKnown RBP1.84□□□□□ -2.11
SMARCA1-204ENST00000478420 PEBP1P30086 187 aaKnown RBP1.84□□□□□ -2.11
SMARCA1-204ENST00000478420 GNG4P50150 75 aa1.84□□□□□ -2.11
SMARCA1-204ENST00000478420 ZNF90Q03938 601 aa1.84□□□□□ -2.11
SMARCA1-204ENST00000478420 ZNF791Q3KP31 576 aaPredicted RBP1.84□□□□□ -2.11
SMARCA1-204ENST00000478420 C1orf134Q5TEV5 83 aa1.84□□□□□ -2.11
SMARCA1-204ENST00000478420 ZNF826PQ6ZT77 177 aa1.84□□□□□ -2.11
SMARCA1-204ENST00000478420 METTL1Q9UBP6 276 aaKnown RBP1.84□□□□□ -2.11
SMARCA1-204ENST00000478420 RPL26L1Q9UNX3 145 aaKnown RBP1.84□□□□□ -2.11
SMARCA1-204ENST00000478420 TPRKBQ9Y3C4 175 aa1.84□□□□□ -2.11
SMARCA1-204ENST00000478420 MPC1Q9Y5U8 109 aa1.84□□□□□ -2.11
SMARCA1-204ENST00000478420 TRPM6Q9BX84 2022 aa1.84□□□□□ -2.12
SMARCA1-204ENST00000478420 SLX4Q8IY92 1834 aa1.84□□□□□ -2.12
SMARCA1-204ENST00000478420 NAIPQ13075 1403 aa1.83□□□□□ -2.12
SMARCA1-204ENST00000478420 SCN9AQ15858 1988 aa1.83□□□□□ -2.12
SMARCA1-204ENST00000478420 SCN8AQ9UQD0 1980 aa1.83□□□□□ -2.12
SMARCA1-204ENST00000478420 TMSB15BA0A087X1C1 80 aa1.83□□□□□ -2.12
SMARCA1-204ENST00000478420 LOC107986453A0A1B0GWG9 222 aa1.83□□□□□ -2.12
SMARCA1-204ENST00000478420 hDV103S1A0JD37 113 aa1.83□□□□□ -2.12
SMARCA1-204ENST00000478420 A6NN06 94 aa1.83□□□□□ -2.12
SMARCA1-204ENST00000478420 HMSDA8MTL9 139 aa1.83□□□□□ -2.12
SMARCA1-204ENST00000478420 IGLV6-57P01721 117 aa1.83□□□□□ -2.12
SMARCA1-204ENST00000478420 PMP2P02689 132 aa1.83□□□□□ -2.12
SMARCA1-204ENST00000478420 SAA1P0DJI8 122 aaPredicted RBP1.83□□□□□ -2.12
SMARCA1-204ENST00000478420 TMEM258P61165 79 aa1.83□□□□□ -2.12
SMARCA1-204ENST00000478420 PCBD1P61457 104 aa1.83□□□□□ -2.12
SMARCA1-204ENST00000478420 LSM3P62310 102 aaKnown RBP1.83□□□□□ -2.12
SMARCA1-204ENST00000478420 BTG2P78543 158 aa1.83□□□□□ -2.12
SMARCA1-204ENST00000478420 KRTAP13-1Q8IUC0 172 aa1.83□□□□□ -2.12
SMARCA1-204ENST00000478420 OR5AS1Q8N127 324 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms