RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 LRCOL1A6NCL2 159 aa13.62□□□□□ -0.23
PDLIM1-202ENST00000477757 H3BP45 60 aa13.62□□□□□ -0.23
PDLIM1-202ENST00000477757 SLC17A3O00476 420 aa13.62□□□□□ -0.23
PDLIM1-202ENST00000477757 ANXA7P20073 488 aaKnown RBP13.62□□□□□ -0.23
PDLIM1-202ENST00000477757 MRPL23Q16540 153 aaKnown RBP13.62□□□□□ -0.23
PDLIM1-202ENST00000477757 TEPPQ6URK8 271 aa13.62□□□□□ -0.23
PDLIM1-202ENST00000477757 PATE2Q6UY27 113 aa13.62□□□□□ -0.23
PDLIM1-202ENST00000477757 NEGR1Q7Z3B1 354 aa13.62□□□□□ -0.23
PDLIM1-202ENST00000477757 ZNF431Q8TF32 576 aaPredicted RBP13.62□□□□□ -0.23
PDLIM1-202ENST00000477757 MIXL1Q9H2W2 232 aa13.62□□□□□ -0.23
PDLIM1-202ENST00000477757 FAT3Q8TDW7 4589 aa13.62□□□□□ -0.23
PDLIM1-202ENST00000477757 SPINK4O60575 86 aa13.61□□□□□ -0.23
PDLIM1-202ENST00000477757 C1QBP02746 253 aa13.61□□□□□ -0.23
PDLIM1-202ENST00000477757 CT45A10P0DMU9 189 aa13.61□□□□□ -0.23
PDLIM1-202ENST00000477757 ZBTB8BQ8NAP8 495 aaPredicted RBP13.61□□□□□ -0.23
PDLIM1-202ENST00000477757 ARL6Q9H0F7 186 aa13.61□□□□□ -0.23
PDLIM1-202ENST00000477757 ARV1Q9H2C2 271 aa13.61□□□□□ -0.23
PDLIM1-202ENST00000477757 STRAPQ9Y3F4 350 aaKnown RBP13.61□□□□□ -0.23
PDLIM1-202ENST00000477757 ANKRD20A5PA0PJZ0 165 aa13.6□□□□□ -0.23
PDLIM1-202ENST00000477757 SNRPCP09234 159 aaKnown RBP13.6□□□□□ -0.23
PDLIM1-202ENST00000477757 CRYBA4P53673 196 aa13.6□□□□□ -0.23
PDLIM1-202ENST00000477757 TCL1AP56279 114 aa13.6□□□□□ -0.23
PDLIM1-202ENST00000477757 SLAQ13239 276 aa13.6□□□□□ -0.23
PDLIM1-202ENST00000477757 LINC00528Q8N1L1 170 aa13.6□□□□□ -0.23
PDLIM1-202ENST00000477757 LRTM2Q8N967 370 aa13.6□□□□□ -0.23
PDLIM1-202ENST00000477757 VGLL1Q99990 258 aa13.6□□□□□ -0.23
PDLIM1-202ENST00000477757 K7EPK0 472 aa13.59□□□□□ -0.23
PDLIM1-202ENST00000477757 IGHV3-53P01767 116 aa13.59□□□□□ -0.23
PDLIM1-202ENST00000477757 ANXA2RQ3ZCQ2 193 aa13.59□□□□□ -0.23
PDLIM1-202ENST00000477757 C4orf46Q504U0 113 aa13.59□□□□□ -0.23
PDLIM1-202ENST00000477757 C10orf126Q8N4M7 172 aa13.59□□□□□ -0.23
PDLIM1-202ENST00000477757 PLA2G2DQ9UNK4 145 aa13.59□□□□□ -0.23
PDLIM1-202ENST00000477757 KLF12Q9Y4X4 402 aa13.59□□□□□ -0.23
PDLIM1-202ENST00000477757 PXMP4Q9Y6I8 212 aa13.59□□□□□ -0.23
PDLIM1-202ENST00000477757 C7orf71A4D174 169 aa13.58□□□□□ -0.24
PDLIM1-202ENST00000477757 CTDSPLO15194 276 aa13.58□□□□□ -0.24
PDLIM1-202ENST00000477757 SLC25A5P05141 298 aaKnown RBP13.58□□□□□ -0.24
PDLIM1-202ENST00000477757 EIF4E3Q8N5X7 224 aaKnown RBP13.58□□□□□ -0.24
PDLIM1-202ENST00000477757 C8orf49Q96NF6 230 aa13.58□□□□□ -0.24
PDLIM1-202ENST00000477757 HHLA3Q9XRX5 114 aa13.58□□□□□ -0.24
PDLIM1-202ENST00000477757 H3BTX0 84 aa13.57□□□□□ -0.24
PDLIM1-202ENST00000477757 PSCAO43653 123 aa13.57□□□□□ -0.24
PDLIM1-202ENST00000477757 CRYGDP07320 174 aa13.57□□□□□ -0.24
PDLIM1-202ENST00000477757 PXDC1Q5TGL8 231 aa13.57□□□□□ -0.24
PDLIM1-202ENST00000477757 Q6ZSA8 131 aa13.57□□□□□ -0.24
PDLIM1-202ENST00000477757 BPIFA4PQ86YQ2 179 aa13.57□□□□□ -0.24
PDLIM1-202ENST00000477757 Q8N814 137 aa13.57□□□□□ -0.24
PDLIM1-202ENST00000477757 MCUBQ9NWR8 336 aa13.57□□□□□ -0.24
PDLIM1-202ENST00000477757 RABL2BQ9UNT1 228 aa13.57□□□□□ -0.24
PDLIM1-202ENST00000477757 RGS5O15539 181 aa13.56□□□□□ -0.24
PDLIM1-202ENST00000477757 PRAF2O60831 178 aa13.56□□□□□ -0.24
PDLIM1-202ENST00000477757 IGLC2P0DOY2 106 aa13.56□□□□□ -0.24
PDLIM1-202ENST00000477757 FHL2Q14192 279 aa13.56□□□□□ -0.24
PDLIM1-202ENST00000477757 CTF1Q16619 201 aa13.56□□□□□ -0.24
PDLIM1-202ENST00000477757 IBA57Q5T440 356 aaKnown RBP13.56□□□□□ -0.24
PDLIM1-202ENST00000477757 LINC00305Q7Z4B0 112 aa13.56□□□□□ -0.24
PDLIM1-202ENST00000477757 MRPL16Q9NX20 251 aaKnown RBP13.56□□□□□ -0.24
PDLIM1-202ENST00000477757 KLLNB2CW77 178 aa13.55□□□□□ -0.24
PDLIM1-202ENST00000477757 SRIP30626 198 aa13.55□□□□□ -0.24
PDLIM1-202ENST00000477757 TMEM128Q5BJH2 165 aa13.55□□□□□ -0.24
PDLIM1-202ENST00000477757 SAT2Q96F10 170 aaPredicted RBP13.55□□□□□ -0.24
PDLIM1-202ENST00000477757 K7EQD1 137 aa13.54□□□□□ -0.24
PDLIM1-202ENST00000477757 SLC38A11Q08AI6 406 aa13.54□□□□□ -0.24
PDLIM1-202ENST00000477757 IL18Q14116 193 aa13.54□□□□□ -0.24
PDLIM1-202ENST00000477757 NAA50Q9GZZ1 169 aaKnown RBP13.54□□□□□ -0.24
PDLIM1-202ENST00000477757 FNDC10F2Z333 226 aa13.53□□□□□ -0.24
PDLIM1-202ENST00000477757 H3BQ15 152 aa13.53□□□□□ -0.24
PDLIM1-202ENST00000477757 VAMP1P23763 118 aa13.53□□□□□ -0.24
PDLIM1-202ENST00000477757 BTN1A1Q13410 526 aa13.53□□□□□ -0.24
PDLIM1-202ENST00000477757 ZNF546Q86UE3 836 aa13.53□□□□□ -0.24
PDLIM1-202ENST00000477757 MRPL32Q9BYC8 188 aaKnown RBP13.53□□□□□ -0.24
PDLIM1-202ENST00000477757 CTDSP2O14595 271 aa13.52□□□□□ -0.25
PDLIM1-202ENST00000477757 OXTP01178 125 aa13.52□□□□□ -0.25
PDLIM1-202ENST00000477757 RRAS2P62070 204 aaPredicted RBP13.52□□□□□ -0.25
PDLIM1-202ENST00000477757 CD300CQ08708 224 aa13.52□□□□□ -0.25
PDLIM1-202ENST00000477757 OPCMLQ14982 345 aa13.52□□□□□ -0.25
PDLIM1-202ENST00000477757 MORN5Q5VZ52 161 aa13.52□□□□□ -0.25
PDLIM1-202ENST00000477757 NPVFQ9HCQ7 196 aa13.52□□□□□ -0.25
PDLIM1-202ENST00000477757 RABL2AQ9UBK7 228 aaPredicted RBP13.52□□□□□ -0.25
PDLIM1-202ENST00000477757 E5RGE8 158 aa13.51□□□□□ -0.25
PDLIM1-202ENST00000477757 CCNKO75909 580 aa13.51□□□□□ -0.25
PDLIM1-202ENST00000477757 GUK1Q16774 197 aa13.51□□□□□ -0.25
PDLIM1-202ENST00000477757 PCNPQ8WW12 178 aaKnown RBP13.51□□□□□ -0.25
PDLIM1-202ENST00000477757 FAM19A4Q96LR4 140 aa13.51□□□□□ -0.25
PDLIM1-202ENST00000477757 PSENENQ9NZ42 101 aa13.51□□□□□ -0.25
PDLIM1-202ENST00000477757 RCL1Q9Y2P8 373 aaKnown RBP13.51□□□□□ -0.25
PDLIM1-202ENST00000477757 COX7A2P2O60397 106 aa13.5□□□□□ -0.25
PDLIM1-202ENST00000477757 MPDU1O75352 247 aa13.5□□□□□ -0.25
PDLIM1-202ENST00000477757 HOXB5P09067 269 aa13.5□□□□□ -0.25
PDLIM1-202ENST00000477757 OR4E1P0C645 316 aa13.5□□□□□ -0.25
PDLIM1-202ENST00000477757 GYPEP15421 78 aa13.5□□□□□ -0.25
PDLIM1-202ENST00000477757 POLR2GP62487 172 aaKnown RBP eCLIP13.5□□□□□ -0.25
PDLIM1-202ENST00000477757 ID3Q02535 119 aa13.5□□□□□ -0.25
PDLIM1-202ENST00000477757 TMEM37Q8WXS4 190 aa13.5□□□□□ -0.25
PDLIM1-202ENST00000477757 MRPL53Q96EL3 112 aaKnown RBP13.5□□□□□ -0.25
PDLIM1-202ENST00000477757 MGAT4CQ9UBM8 478 aa13.5□□□□□ -0.25
PDLIM1-202ENST00000477757 TP53TG3Q9ULZ0 132 aa13.5□□□□□ -0.25
PDLIM1-202ENST00000477757 TRAV5A0A0B4J249 113 aa13.49□□□□□ -0.25
PDLIM1-202ENST00000477757 TRGV4A0A0C4DH28 118 aa13.49□□□□□ -0.25
PDLIM1-202ENST00000477757 GOSR2O14653 212 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms