RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 HERVK_113P63121 156 aa10.08□□□□□ -0.8
RTFDC1-207ENST00000477573 DAZAP2Q15038 168 aaPredicted RBP10.08□□□□□ -0.8
RTFDC1-207ENST00000477573 UTF1Q5T230 341 aa10.08□□□□□ -0.8
RTFDC1-207ENST00000477573 ANKRD29Q8N6D5 301 aa10.08□□□□□ -0.8
RTFDC1-207ENST00000477573 OR11H6Q8NGC7 330 aa10.08□□□□□ -0.8
RTFDC1-207ENST00000477573 KLF14Q8TD94 323 aaPredicted RBP10.08□□□□□ -0.8
RTFDC1-207ENST00000477573 ZMAT4Q9H898 229 aa10.08□□□□□ -0.8
RTFDC1-207ENST00000477573 FAM215AQ9Y5M1 114 aa10.08□□□□□ -0.8
RTFDC1-207ENST00000477573 A0A096LNJ9 63 aa10.08□□□□□ -0.8
RTFDC1-207ENST00000477573 TRAV8-2A0A0B4J237 113 aa10.08□□□□□ -0.8
RTFDC1-207ENST00000477573 HAX1O00165 279 aa10.08□□□□□ -0.8
RTFDC1-207ENST00000477573 CRYGDP07320 174 aa10.08□□□□□ -0.8
RTFDC1-207ENST00000477573 C9orf153Q5TBE3 101 aa10.08□□□□□ -0.8
RTFDC1-207ENST00000477573 RPP21Q9H633 154 aaKnown RBP10.08□□□□□ -0.8
RTFDC1-207ENST00000477573 C7orf69Q9H7B7 122 aa10.08□□□□□ -0.8
RTFDC1-207ENST00000477573 LAMA5O15230 3695 aa10.08□□□□□ -0.8
RTFDC1-207ENST00000477573 TANC2Q9HCD6 1990 aa10.07□□□□□ -0.8
RTFDC1-207ENST00000477573 UQCRQO14949 82 aa10.07□□□□□ -0.8
RTFDC1-207ENST00000477573 CECR9P0C854 216 aa10.07□□□□□ -0.8
RTFDC1-207ENST00000477573 DLX6P56179 175 aa10.07□□□□□ -0.8
RTFDC1-207ENST00000477573 Q6ZQT7 251 aa10.07□□□□□ -0.8
RTFDC1-207ENST00000477573 C3orf22Q8N5N4 141 aa10.07□□□□□ -0.8
RTFDC1-207ENST00000477573 GATD1Q8NB37 220 aa10.07□□□□□ -0.8
RTFDC1-207ENST00000477573 IFI27L1Q96BM0 104 aa10.07□□□□□ -0.8
RTFDC1-207ENST00000477573 MGAQ8IWI9 3026 aa10.07□□□□□ -0.8
RTFDC1-207ENST00000477573 RP1L1Q8IWN7 2480 aaPredicted RBP10.07□□□□□ -0.8
RTFDC1-207ENST00000477573 HEATR1Q9H583 2144 aaKnown RBP10.07□□□□□ -0.8
RTFDC1-207ENST00000477573 HBDP02042 147 aa10.07□□□□□ -0.8
RTFDC1-207ENST00000477573 PSMB2P49721 201 aa10.07□□□□□ -0.8
RTFDC1-207ENST00000477573 LINC01559Q495D7 138 aa10.07□□□□□ -0.8
RTFDC1-207ENST00000477573 SLC25A15Q9Y619 301 aa10.07□□□□□ -0.8
RTFDC1-207ENST00000477573 AGRNO00468 2067 aa10.06□□□□□ -0.8
RTFDC1-207ENST00000477573 MYMXA0A1B0GTQ4 84 aa10.06□□□□□ -0.8
RTFDC1-207ENST00000477573 C3orf36Q3SXR2 165 aa10.06□□□□□ -0.8
RTFDC1-207ENST00000477573 C10orf126Q8N4M7 172 aa10.06□□□□□ -0.8
RTFDC1-207ENST00000477573 OR4C13Q8NGP0 309 aa10.06□□□□□ -0.8
RTFDC1-207ENST00000477573 LINC00526Q96FQ7 95 aa10.06□□□□□ -0.8
RTFDC1-207ENST00000477573 PRSS22Q9GZN4 317 aa10.06□□□□□ -0.8
RTFDC1-207ENST00000477573 BOD1L1Q8NFC6 3051 aa10.06□□□□□ -0.8
RTFDC1-207ENST00000477573 IGKV2D-26A0A0A0MRZ7 120 aa10.05□□□□□ -0.8
RTFDC1-207ENST00000477573 IGHV1-18A0A0C4DH31 117 aa10.05□□□□□ -0.8
RTFDC1-207ENST00000477573 PRSS46E5RG02 174 aa10.05□□□□□ -0.8
RTFDC1-207ENST00000477573 TIMM8AO60220 97 aaPredicted RBP10.05□□□□□ -0.8
RTFDC1-207ENST00000477573 MZT1Q08AG7 82 aa10.05□□□□□ -0.8
RTFDC1-207ENST00000477573 PDPNQ86YL7 162 aa10.05□□□□□ -0.8
RTFDC1-207ENST00000477573 C15orf53Q8NAA6 179 aa10.05□□□□□ -0.8
RTFDC1-207ENST00000477573 HIST1H4GQ99525 98 aa10.05□□□□□ -0.8
RTFDC1-207ENST00000477573 ESPL1Q14674 2120 aa10.05□□□□□ -0.8
RTFDC1-207ENST00000477573 TRBV7-3A0A075B6L6 115 aa10.05□□□□□ -0.8
RTFDC1-207ENST00000477573 TRBV7-7A0A0K0K1E9 115 aa10.05□□□□□ -0.8
RTFDC1-207ENST00000477573 ACTL6BO94805 426 aa10.05□□□□□ -0.8
RTFDC1-207ENST00000477573 CD24P25063 80 aa10.05□□□□□ -0.8
RTFDC1-207ENST00000477573 RPS16P62249 146 aaKnown RBP10.05□□□□□ -0.8
RTFDC1-207ENST00000477573 PRR20EP86478 221 aa10.05□□□□□ -0.8
RTFDC1-207ENST00000477573 PRR20CP86479 221 aa10.05□□□□□ -0.8
RTFDC1-207ENST00000477573 PRR20DP86480 221 aa10.05□□□□□ -0.8
RTFDC1-207ENST00000477573 PRR20BP86481 221 aa10.05□□□□□ -0.8
RTFDC1-207ENST00000477573 PRR20AP86496 221 aa10.05□□□□□ -0.8
RTFDC1-207ENST00000477573 CFHR4Q92496 578 aa10.05□□□□□ -0.8
RTFDC1-207ENST00000477573 EDA2RQ9HAV5 297 aa10.05□□□□□ -0.8
RTFDC1-207ENST00000477573 HHLA3Q9XRX5 114 aa10.05□□□□□ -0.8
RTFDC1-207ENST00000477573 SEC61GP60059 68 aa10.04□□□□□ -0.8
RTFDC1-207ENST00000477573 MBNL2Q5VZF2 373 aaKnown RBP10.04□□□□□ -0.8
RTFDC1-207ENST00000477573 MIR17HGQ75NE6 70 aa10.04□□□□□ -0.8
RTFDC1-207ENST00000477573 ZNF488Q96MN9 340 aa10.04□□□□□ -0.8
RTFDC1-207ENST00000477573 CXXC4Q9H2H0 198 aa10.04□□□□□ -0.8
RTFDC1-207ENST00000477573 ZNF492Q9P255 531 aa10.04□□□□□ -0.8
RTFDC1-207ENST00000477573 SPENQ96T58 3664 aaKnown RBP10.04□□□□□ -0.8
RTFDC1-207ENST00000477573 NPYP01303 97 aa10.04□□□□□ -0.8
RTFDC1-207ENST00000477573 ATP5G1P05496 136 aa10.04□□□□□ -0.8
RTFDC1-207ENST00000477573 GFRALQ6UXV0 394 aa10.04□□□□□ -0.8
RTFDC1-207ENST00000477573 ODF3Q96PU9 254 aa10.04□□□□□ -0.8
RTFDC1-207ENST00000477573 HS3ST6Q96QI5 342 aa10.04□□□□□ -0.8
RTFDC1-207ENST00000477573 IMUPQ9GZP8 106 aa10.04□□□□□ -0.8
RTFDC1-207ENST00000477573 GRPP07492 148 aa10.03□□□□□ -0.8
RTFDC1-207ENST00000477573 TEX36Q5VZQ5 186 aa10.03□□□□□ -0.8
RTFDC1-207ENST00000477573 RFESDQ8TAC1 157 aa10.03□□□□□ -0.8
RTFDC1-207ENST00000477573 SSMEM1Q8WWF3 244 aa10.03□□□□□ -0.8
RTFDC1-207ENST00000477573 LINC01600Q96MT4 127 aa10.03□□□□□ -0.8
RTFDC1-207ENST00000477573 CHCHD5Q9BSY4 110 aa10.03□□□□□ -0.8
RTFDC1-207ENST00000477573 AMMECR1Q9Y4X0 333 aaPredicted RBP10.03□□□□□ -0.8
RTFDC1-207ENST00000477573 HSPB6O14558 160 aa10.02□□□□□ -0.8
RTFDC1-207ENST00000477573 GNG5P63218 68 aa10.02□□□□□ -0.8
RTFDC1-207ENST00000477573 WDR86Q86TI4 376 aa10.02□□□□□ -0.8
RTFDC1-207ENST00000477573 DRAM1Q8N682 238 aa10.02□□□□□ -0.8
RTFDC1-207ENST00000477573 Q8NA96 180 aa10.02□□□□□ -0.8
RTFDC1-207ENST00000477573 NPIPB3Q92617 1050 aa10.02□□□□□ -0.8
RTFDC1-207ENST00000477573 FLYWCH2Q96CP2 140 aaKnown RBP10.02□□□□□ -0.8
RTFDC1-207ENST00000477573 PGLYRP4Q96LB8 373 aa10.02□□□□□ -0.8
RTFDC1-207ENST00000477573 PRO0628Q9UI54 55 aa10.02□□□□□ -0.8
RTFDC1-207ENST00000477573 EPDR1Q9UM22 224 aa10.02□□□□□ -0.8
RTFDC1-207ENST00000477573 RAXQ9Y2V3 346 aa10.02□□□□□ -0.8
RTFDC1-207ENST00000477573 SRRM4A7MD48 611 aaKnown RBP10.02□□□□□ -0.81
RTFDC1-207ENST00000477573 OOSP1A8MZH6 123 aa10.02□□□□□ -0.81
RTFDC1-207ENST00000477573 M0R1B8 84 aa10.02□□□□□ -0.81
RTFDC1-207ENST00000477573 ZNF137PP52743 207 aa10.02□□□□□ -0.81
RTFDC1-207ENST00000477573 C3orf56Q8N813 242 aa10.02□□□□□ -0.81
RTFDC1-207ENST00000477573 MYOZ3Q8TDC0 251 aa10.02□□□□□ -0.81
RTFDC1-207ENST00000477573 ZNF503Q96F45 646 aa10.02□□□□□ -0.81
RTFDC1-207ENST00000477573 PLPPR2Q96GM1 343 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms