RNA–Protein interactions for RNA: ENST00000477572.1

VPS50-213, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-213ENST00000477572 OR2T10Q8NGZ9 312 aa1.02□□□□□ -2.25
VPS50-213ENST00000477572 SGMS2Q8NHU3 365 aa1.02□□□□□ -2.25
VPS50-213ENST00000477572 PPTC7Q8NI37 304 aa1.02□□□□□ -2.25
VPS50-213ENST00000477572 STAG3L4Q8TBR4 150 aa1.02□□□□□ -2.25
VPS50-213ENST00000477572 MRPL30Q8TCC3 161 aaKnown RBP1.02□□□□□ -2.25
VPS50-213ENST00000477572 BRK1Q8WUW1 75 aa1.02□□□□□ -2.25
VPS50-213ENST00000477572 NEO1Q92859 1461 aa1.02□□□□□ -2.25
VPS50-213ENST00000477572 GNPNAT1Q96EK6 184 aaPredicted RBP1.02□□□□□ -2.25
VPS50-213ENST00000477572 ZNF625Q96I27 306 aaPredicted RBP1.02□□□□□ -2.25
VPS50-213ENST00000477572 CIB3Q96Q77 187 aaPredicted RBP1.02□□□□□ -2.25
VPS50-213ENST00000477572 CCL13Q99616 98 aa1.02□□□□□ -2.25
VPS50-213ENST00000477572 RTL8AQ9BWD3 113 aa1.02□□□□□ -2.25
VPS50-213ENST00000477572 ZFHX2Q9C0A1 2572 aaPredicted RBP1.02□□□□□ -2.25
VPS50-213ENST00000477572 WDR61Q9GZS3 305 aaKnown RBP1.02□□□□□ -2.25
VPS50-213ENST00000477572 EIF5A2Q9GZV4 153 aaKnown RBP1.02□□□□□ -2.25
VPS50-213ENST00000477572 MED28Q9H204 178 aa1.02□□□□□ -2.25
VPS50-213ENST00000477572 CXCL16Q9H2A7 254 aa1.02□□□□□ -2.25
VPS50-213ENST00000477572 TCEAL2Q9H3H9 227 aaPredicted RBP1.02□□□□□ -2.25
VPS50-213ENST00000477572 BANF2Q9H503 90 aa1.02□□□□□ -2.25
VPS50-213ENST00000477572 SAR1AQ9NR31 198 aa1.02□□□□□ -2.25
VPS50-213ENST00000477572 DSPPQ9NZW4 1301 aa1.02□□□□□ -2.25
VPS50-213ENST00000477572 INO80Q9ULG1 1556 aaPredicted RBP1.02□□□□□ -2.25
VPS50-213ENST00000477572 FUT9Q9Y231 359 aa1.02□□□□□ -2.25
VPS50-213ENST00000477572 PTPRFP10586 1907 aa1.01□□□□□ -2.25
VPS50-213ENST00000477572 PLXNA4Q9HCM2 1894 aa1.01□□□□□ -2.25
VPS50-213ENST00000477572 MYO5AQ9Y4I1 1855 aaKnown RBP1.01□□□□□ -2.25
VPS50-213ENST00000477572 RGPD3A6NKT7 1758 aaPredicted RBP1.01□□□□□ -2.25
VPS50-213ENST00000477572 RBBP6Q7Z6E9 1792 aaKnown RBP1.01□□□□□ -2.25
VPS50-213ENST00000477572 KIDINS220Q9ULH0 1771 aa1.01□□□□□ -2.25
VPS50-213ENST00000477572 SPHKAPQ2M3C7 1700 aa1.01□□□□□ -2.25
VPS50-213ENST00000477572 MON2Q7Z3U7 1717 aa1.01□□□□□ -2.25
VPS50-213ENST00000477572 PPRC1Q5VV67 1664 aaKnown RBP1.01□□□□□ -2.25
VPS50-213ENST00000477572 ROBO1Q9Y6N7 1651 aa1.01□□□□□ -2.25
VPS50-213ENST00000477572 GLI3P10071 1580 aa1.01□□□□□ -2.25
VPS50-213ENST00000477572 MAGI3Q5TCQ9 1506 aa1.01□□□□□ -2.25
VPS50-213ENST00000477572 ERVK-7P63135 1459 aa1.01□□□□□ -2.25
VPS50-213ENST00000477572 MAGI2Q86UL8 1455 aa1.01□□□□□ -2.25
VPS50-213ENST00000477572 NSD3Q9BZ95 1437 aa1.01□□□□□ -2.25
VPS50-213ENST00000477572 TRBV20OR9-2A0A075B6H5 130 aa1.01□□□□□ -2.25
VPS50-213ENST00000477572 TRAV9-1A0A075B6T8 112 aa1.01□□□□□ -2.25
VPS50-213ENST00000477572 TRAV27A0A087WT01 109 aa1.01□□□□□ -2.25
VPS50-213ENST00000477572 TRGV10A0A0A0MS01 117 aa1.01□□□□□ -2.25
VPS50-213ENST00000477572 IGHV1-69-2A0A0G2JMI3 117 aa1.01□□□□□ -2.25
VPS50-213ENST00000477572 TRBV7-6A0A0J9YX20 115 aa1.01□□□□□ -2.25
VPS50-213ENST00000477572 ARRDC5A6NEK1 342 aa1.01□□□□□ -2.25
VPS50-213ENST00000477572 TLCD2A6NGC4 264 aa1.01□□□□□ -2.25
VPS50-213ENST00000477572 OR51F1A6NGY5 319 aa1.01□□□□□ -2.25
VPS50-213ENST00000477572 ZNF727A8MUV8 499 aa1.01□□□□□ -2.25
VPS50-213ENST00000477572 B4DEV8 164 aa1.01□□□□□ -2.25
VPS50-213ENST00000477572 K7ERJ3 54 aa1.01□□□□□ -2.25
VPS50-213ENST00000477572 M0R378 163 aa1.01□□□□□ -2.25
VPS50-213ENST00000477572 TAX1BP3O14907 124 aa1.01□□□□□ -2.25
VPS50-213ENST00000477572 OR2T1O43869 369 aa1.01□□□□□ -2.25
VPS50-213ENST00000477572 EDF1O60869 148 aaKnown RBP1.01□□□□□ -2.25
VPS50-213ENST00000477572 KLF7O75840 302 aaPredicted RBP1.01□□□□□ -2.25
VPS50-213ENST00000477572 NCR2O95944 276 aa1.01□□□□□ -2.25
VPS50-213ENST00000477572 NAPSAO96009 420 aa1.01□□□□□ -2.25
VPS50-213ENST00000477572 IGKV1-5P01602 117 aa1.01□□□□□ -2.25
VPS50-213ENST00000477572 APOC3P02656 99 aa1.01□□□□□ -2.25
VPS50-213ENST00000477572 MT-ATP8P03928 68 aa1.01□□□□□ -2.25
VPS50-213ENST00000477572 TCRAP04437 139 aa1.01□□□□□ -2.25
VPS50-213ENST00000477572 CXCL1P09341 107 aa1.01□□□□□ -2.25
VPS50-213ENST00000477572 IGLC1P0CG04 106 aa1.01□□□□□ -2.25
VPS50-213ENST00000477572 FABP2P12104 132 aa1.01□□□□□ -2.25
VPS50-213ENST00000477572 HIST1H1DP16402 221 aaKnown RBP1.01□□□□□ -2.25
VPS50-213ENST00000477572 NFYBP25208 207 aa1.01□□□□□ -2.25
VPS50-213ENST00000477572 CRYBB3P26998 211 aa1.01□□□□□ -2.25
VPS50-213ENST00000477572 PSMB8P28062 276 aa1.01□□□□□ -2.25
VPS50-213ENST00000477572 SDC2P34741 201 aa1.01□□□□□ -2.25
VPS50-213ENST00000477572 ZNF93P35789 620 aaPredicted RBP1.01□□□□□ -2.25
VPS50-213ENST00000477572 ETV6P41212 452 aa1.01□□□□□ -2.25
VPS50-213ENST00000477572 ZNF80P51504 273 aaPredicted RBP1.01□□□□□ -2.25
VPS50-213ENST00000477572 TMBIM6P55061 237 aa1.01□□□□□ -2.25
VPS50-213ENST00000477572 GABARAPL2P60520 117 aa1.01□□□□□ -2.25
VPS50-213ENST00000477572 GNGT1P63211 74 aa1.01□□□□□ -2.25
VPS50-213ENST00000477572 DCDP81605 110 aaKnown RBP1.01□□□□□ -2.25
VPS50-213ENST00000477572 PLGLB1Q02325 96 aa1.01□□□□□ -2.25
VPS50-213ENST00000477572 ZNF846Q147U1 533 aa1.01□□□□□ -2.25
VPS50-213ENST00000477572 PEA15Q15121 130 aa1.01□□□□□ -2.25
VPS50-213ENST00000477572 KHDC3LQ587J8 217 aa1.01□□□□□ -2.25
VPS50-213ENST00000477572 SPANXN3Q5MJ09 141 aa1.01□□□□□ -2.25
VPS50-213ENST00000477572 C6orf52Q5T4I8 152 aa1.01□□□□□ -2.25
VPS50-213ENST00000477572 C1orf140Q5VVS0 124 aa1.01□□□□□ -2.25
VPS50-213ENST00000477572 UNQ5815/PRO19632Q6UWF5 114 aa1.01□□□□□ -2.25
VPS50-213ENST00000477572 ALKAL2Q6UX46 152 aa1.01□□□□□ -2.25
VPS50-213ENST00000477572 LCA10Q71F78 164 aa1.01□□□□□ -2.25
VPS50-213ENST00000477572 LINC00305Q7Z4B0 112 aa1.01□□□□□ -2.25
VPS50-213ENST00000477572 RPS19BP1Q86WX3 136 aaKnown RBP1.01□□□□□ -2.25
VPS50-213ENST00000477572 LINC00311Q8N616 119 aa1.01□□□□□ -2.25
VPS50-213ENST00000477572 C3orf56Q8N813 242 aa1.01□□□□□ -2.25
VPS50-213ENST00000477572 OR8D4Q8NGM9 314 aa1.01□□□□□ -2.25
VPS50-213ENST00000477572 OR51H1Q8NH63 302 aa1.01□□□□□ -2.25
VPS50-213ENST00000477572 RAB2BQ8WUD1 216 aa1.01□□□□□ -2.25
VPS50-213ENST00000477572 RNASE6Q93091 150 aaKnown RBP1.01□□□□□ -2.25
VPS50-213ENST00000477572 DPH3Q96FX2 82 aa1.01□□□□□ -2.25
VPS50-213ENST00000477572 ABHD14BQ96IU4 210 aa1.01□□□□□ -2.25
VPS50-213ENST00000477572 MIEN1Q9BRT3 115 aa1.01□□□□□ -2.25
VPS50-213ENST00000477572 GINS4Q9BRT9 223 aa1.01□□□□□ -2.25
VPS50-213ENST00000477572 VAMP8Q9BV40 100 aa1.01□□□□□ -2.25
VPS50-213ENST00000477572 MRPL32Q9BYC8 188 aaKnown RBP1.01□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms