RNA–Protein interactions for RNA: ENST00000477446.5

EPHB4-204, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 1,551 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-204ENST00000477446 GNG7O60262 68 aa12.9□□□□□ -0.35
EPHB4-204ENST00000477446 HIST1H1EP10412 219 aaKnown RBP12.9□□□□□ -0.35
EPHB4-204ENST00000477446 GP9P14770 177 aa12.9□□□□□ -0.35
EPHB4-204ENST00000477446 SLURP1P55000 103 aa12.9□□□□□ -0.35
EPHB4-204ENST00000477446 ERVFC1-1P60608 527 aa12.9□□□□□ -0.35
EPHB4-204ENST00000477446 FRZBQ92765 325 aa12.9□□□□□ -0.35
EPHB4-204ENST00000477446 IGF2BP2-AS1Q96M15 143 aa12.9□□□□□ -0.35
EPHB4-204ENST00000477446 GAR1Q9NY12 217 aaKnown RBP12.9□□□□□ -0.35
EPHB4-204ENST00000477446 EPDR1Q9UM22 224 aa12.9□□□□□ -0.35
EPHB4-204ENST00000477446 DNHD1Q96M86 4753 aa12.89□□□□□ -0.35
EPHB4-204ENST00000477446 ZNF320A2RRD8 509 aa12.89□□□□□ -0.35
EPHB4-204ENST00000477446 CTSGP08311 255 aa12.89□□□□□ -0.35
EPHB4-204ENST00000477446 HOXD3P31249 432 aaPredicted RBP12.89□□□□□ -0.35
EPHB4-204ENST00000477446 ADMP35318 185 aa12.89□□□□□ -0.35
EPHB4-204ENST00000477446 CHRDL1Q9BU40 450 aa12.89□□□□□ -0.35
EPHB4-204ENST00000477446 WI2-2373I1.2A0A1W2PRP0 233 aa12.88□□□□□ -0.35
EPHB4-204ENST00000477446 PGPA6NDG6 321 aa12.88□□□□□ -0.35
EPHB4-204ENST00000477446 RANP62826 216 aaKnown RBP12.88□□□□□ -0.35
EPHB4-204ENST00000477446 TMEM183BQ1AE95 376 aa12.88□□□□□ -0.35
EPHB4-204ENST00000477446 RPEL1Q2QD12 228 aa12.88□□□□□ -0.35
EPHB4-204ENST00000477446 LINC00482Q8N8I6 264 aa12.88□□□□□ -0.35
EPHB4-204ENST00000477446 C5orf17Q8NAS9 161 aa12.88□□□□□ -0.35
EPHB4-204ENST00000477446 SHANK2-AS3Q9BTD1 123 aa12.88□□□□□ -0.35
EPHB4-204ENST00000477446 KLF12Q9Y4X4 402 aa12.88□□□□□ -0.35
EPHB4-204ENST00000477446 SMIM6P0DI80 62 aa12.87□□□□□ -0.35
EPHB4-204ENST00000477446 MEOX2P50222 304 aa12.87□□□□□ -0.35
EPHB4-204ENST00000477446 KLF5Q13887 457 aaPredicted RBP12.87□□□□□ -0.35
EPHB4-204ENST00000477446 COX19Q49B96 90 aa12.87□□□□□ -0.35
EPHB4-204ENST00000477446 ACTL10Q5JWF8 245 aa12.87□□□□□ -0.35
EPHB4-204ENST00000477446 ZNF600Q6ZNG1 722 aa12.87□□□□□ -0.35
EPHB4-204ENST00000477446 BPIFA4PQ86YQ2 179 aa12.87□□□□□ -0.35
EPHB4-204ENST00000477446 LYPD1Q8N2G4 141 aa12.87□□□□□ -0.35
EPHB4-204ENST00000477446 DLX4Q92988 240 aaPredicted RBP12.87□□□□□ -0.35
EPHB4-204ENST00000477446 OTORQ9NRC9 128 aa12.87□□□□□ -0.35
EPHB4-204ENST00000477446 IGHV3-35A0A0C4DH35 117 aa12.86□□□□□ -0.35
EPHB4-204ENST00000477446 ZNF98A6NK75 572 aa12.86□□□□□ -0.35
EPHB4-204ENST00000477446 H3BRN7 92 aa12.86□□□□□ -0.35
EPHB4-204ENST00000477446 IGLV2-8P01709 118 aa12.86□□□□□ -0.35
EPHB4-204ENST00000477446 SLC25A5P05141 298 aaKnown RBP12.86□□□□□ -0.35
EPHB4-204ENST00000477446 FAM231DQ6ZW35 169 aa12.86□□□□□ -0.35
EPHB4-204ENST00000477446 BAGE2Q86Y30 109 aa12.86□□□□□ -0.35
EPHB4-204ENST00000477446 RNF125Q96EQ8 232 aa12.86□□□□□ -0.35
EPHB4-204ENST00000477446 V9GYV3 84 aa12.86□□□□□ -0.35
EPHB4-204ENST00000477446 UBE2G1P62253 170 aa12.86□□□□□ -0.35
EPHB4-204ENST00000477446 PRR31Q5SQ13 230 aa12.86□□□□□ -0.35
EPHB4-204ENST00000477446 BLNKQ8WV28 456 aa12.86□□□□□ -0.35
EPHB4-204ENST00000477446 ZNF414Q96IQ9 312 aa12.86□□□□□ -0.35
EPHB4-204ENST00000477446 ATG101Q9BSB4 218 aa12.86□□□□□ -0.35
EPHB4-204ENST00000477446 SYNJ2BPP57105 145 aa12.85□□□□□ -0.35
EPHB4-204ENST00000477446 COA6Q5JTJ3 125 aaKnown RBP12.85□□□□□ -0.35
EPHB4-204ENST00000477446 GPHB5Q86YW7 130 aa12.85□□□□□ -0.35
EPHB4-204ENST00000477446 FMC1Q96HJ9 113 aa12.85□□□□□ -0.35
EPHB4-204ENST00000477446 C12orf57Q99622 126 aa12.85□□□□□ -0.35
EPHB4-204ENST00000477446 IL4P05112 153 aa12.84□□□□□ -0.35
EPHB4-204ENST00000477446 S100A2P29034 98 aa12.84□□□□□ -0.35
EPHB4-204ENST00000477446 IBA57Q5T440 356 aaKnown RBP12.84□□□□□ -0.35
EPHB4-204ENST00000477446 WFDC9Q8NEX5 89 aa12.84□□□□□ -0.35
EPHB4-204ENST00000477446 Q9H3A6 140 aa12.84□□□□□ -0.35
EPHB4-204ENST00000477446 TRAPPC1Q9Y5R8 145 aa12.84□□□□□ -0.35
EPHB4-204ENST00000477446 TRBV6-1A0A0K0K1D8 114 aa12.83□□□□□ -0.36
EPHB4-204ENST00000477446 OVOL1O14753 267 aa12.83□□□□□ -0.36
EPHB4-204ENST00000477446 MGST1P10620 155 aaKnown RBP12.83□□□□□ -0.36
EPHB4-204ENST00000477446 RELQ04864 619 aaPredicted RBP12.83□□□□□ -0.36
EPHB4-204ENST00000477446 OR5I1Q13606 314 aa12.83□□□□□ -0.36
EPHB4-204ENST00000477446 FAM106AQ4KMX7 169 aa12.83□□□□□ -0.36
EPHB4-204ENST00000477446 GPR82Q96P67 336 aa12.83□□□□□ -0.36
EPHB4-204ENST00000477446 PKD1L1Q8TDX9 2849 aa12.83□□□□□ -0.36
EPHB4-204ENST00000477446 CD33P20138 364 aa12.82□□□□□ -0.36
EPHB4-204ENST00000477446 PDE6HQ13956 83 aa12.82□□□□□ -0.36
EPHB4-204ENST00000477446 UNQ9165/PRO28630Q6UXU0 137 aa12.82□□□□□ -0.36
EPHB4-204ENST00000477446 CMTM2Q8TAZ6 248 aa12.82□□□□□ -0.36
EPHB4-204ENST00000477446 ZNF586Q9NXT0 402 aa12.82□□□□□ -0.36
EPHB4-204ENST00000477446 LGALS9O00182 355 aa12.81□□□□□ -0.36
EPHB4-204ENST00000477446 SLC17A3O00476 420 aa12.81□□□□□ -0.36
EPHB4-204ENST00000477446 NDUFA4O00483 81 aa12.81□□□□□ -0.36
EPHB4-204ENST00000477446 TCRAP04437 139 aa12.81□□□□□ -0.36
EPHB4-204ENST00000477446 HIST3H2BBQ8N257 126 aa12.81□□□□□ -0.36
EPHB4-204ENST00000477446 ARL6IP6Q8N6S5 226 aa12.81□□□□□ -0.36
EPHB4-204ENST00000477446 TRBV19A0A075B6N1 114 aa12.81□□□□□ -0.36
EPHB4-204ENST00000477446 IGLC2P0DOY2 106 aa12.81□□□□□ -0.36
EPHB4-204ENST00000477446 LEMD1Q68G75 181 aa12.81□□□□□ -0.36
EPHB4-204ENST00000477446 WDR73Q6P4I2 378 aa12.81□□□□□ -0.36
EPHB4-204ENST00000477446 REC114Q7Z4M0 266 aa12.81□□□□□ -0.36
EPHB4-204ENST00000477446 TMEM183AQ8IXX5 376 aa12.81□□□□□ -0.36
EPHB4-204ENST00000477446 OR9G4Q8NGQ1 327 aa12.81□□□□□ -0.36
EPHB4-204ENST00000477446 GRAMD2BQ96HH9 432 aa12.81□□□□□ -0.36
EPHB4-204ENST00000477446 IGHV3OR16-8A0A075B7F1 116 aa12.8□□□□□ -0.36
EPHB4-204ENST00000477446 SMIM27A0A1W2PRY6 76 aa12.8□□□□□ -0.36
EPHB4-204ENST00000477446 ZNF705GA8MUZ8 300 aaPredicted RBP12.8□□□□□ -0.36
EPHB4-204ENST00000477446 GATCO43716 136 aaKnown RBP12.8□□□□□ -0.36
EPHB4-204ENST00000477446 MT-ND6P03923 174 aa12.8□□□□□ -0.36
EPHB4-204ENST00000477446 TOMM20LQ6UXN7 152 aa12.8□□□□□ -0.36
EPHB4-204ENST00000477446 LINC00479Q96M42 142 aa12.8□□□□□ -0.36
EPHB4-204ENST00000477446 GNB1LQ9BYB4 327 aa12.8□□□□□ -0.36
EPHB4-204ENST00000477446 RNASE7Q9H1E1 156 aaKnown RBP12.8□□□□□ -0.36
EPHB4-204ENST00000477446 K7EQM0 130 aa12.79□□□□□ -0.36
EPHB4-204ENST00000477446 MRPS12O15235 138 aaKnown RBP12.79□□□□□ -0.36
EPHB4-204ENST00000477446 RPL7P18124 248 aaKnown RBP12.79□□□□□ -0.36
EPHB4-204ENST00000477446 RASL11AQ6T310 242 aa12.79□□□□□ -0.36
EPHB4-204ENST00000477446 MLST8Q9BVC4 326 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms