RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 KMT2AQ03164 3969 aa5.11□□□□□ -1.59
BRCA1-214ENST00000477152 ZNF705GA8MUZ8 300 aaPredicted RBP5.11□□□□□ -1.59
BRCA1-214ENST00000477152 H3BRN7 92 aa5.11□□□□□ -1.59
BRCA1-214ENST00000477152 H7BYZ3 331 aa5.11□□□□□ -1.59
BRCA1-214ENST00000477152 CDKN1BP46527 198 aa5.11□□□□□ -1.59
BRCA1-214ENST00000477152 RAB31Q13636 194 aa5.11□□□□□ -1.59
BRCA1-214ENST00000477152 SPCS2Q15005 226 aa5.11□□□□□ -1.59
BRCA1-214ENST00000477152 CNPY1Q3B7I2 92 aa5.11□□□□□ -1.59
BRCA1-214ENST00000477152 LCN15Q6UWW0 184 aa5.11□□□□□ -1.59
BRCA1-214ENST00000477152 AMTNQ6UX39 209 aa5.11□□□□□ -1.59
BRCA1-214ENST00000477152 CCDC190Q86UF4 302 aa5.11□□□□□ -1.59
BRCA1-214ENST00000477152 ZBTB8BQ8NAP8 495 aaPredicted RBP5.11□□□□□ -1.59
BRCA1-214ENST00000477152 OR10P1Q8NGE3 313 aa5.11□□□□□ -1.59
BRCA1-214ENST00000477152 DYNC2LI1Q8TCX1 351 aa5.11□□□□□ -1.59
BRCA1-214ENST00000477152 SHANK2-AS3Q9BTD1 123 aa5.11□□□□□ -1.59
BRCA1-214ENST00000477152 TMPRSS5Q9H3S3 457 aa5.11□□□□□ -1.59
BRCA1-214ENST00000477152 PSENENQ9NZ42 101 aa5.11□□□□□ -1.59
BRCA1-214ENST00000477152 DNAH10Q8IVF4 4471 aa5.11□□□□□ -1.59
BRCA1-214ENST00000477152 A0A087X0K7 114 aa5.1□□□□□ -1.59
BRCA1-214ENST00000477152 NAP1L6A6NFF2 107 aa5.1□□□□□ -1.59
BRCA1-214ENST00000477152 SNURFLB1AK76 121 aa5.1□□□□□ -1.59
BRCA1-214ENST00000477152 M0R2Z0 102 aa5.1□□□□□ -1.59
BRCA1-214ENST00000477152 GOSR2O14653 212 aa5.1□□□□□ -1.59
BRCA1-214ENST00000477152 HOXB5P09067 269 aa5.1□□□□□ -1.59
BRCA1-214ENST00000477152 LINC00869P0C866 280 aa5.1□□□□□ -1.59
BRCA1-214ENST00000477152 DEFB1P60022 68 aa5.1□□□□□ -1.59
BRCA1-214ENST00000477152 PLP1P60201 277 aa5.1□□□□□ -1.59
BRCA1-214ENST00000477152 POLR2GP62487 172 aaKnown RBP eCLIP5.1□□□□□ -1.59
BRCA1-214ENST00000477152 DLK1P80370 383 aa5.1□□□□□ -1.59
BRCA1-214ENST00000477152 PSG3Q16557 428 aa5.1□□□□□ -1.59
BRCA1-214ENST00000477152 ZNF546Q86UE3 836 aa5.1□□□□□ -1.59
BRCA1-214ENST00000477152 OR8A1Q8NGG7 326 aa5.1□□□□□ -1.59
BRCA1-214ENST00000477152 TMEM263Q8WUH6 116 aaKnown RBP5.1□□□□□ -1.59
BRCA1-214ENST00000477152 SCRT1Q9BWW7 348 aa5.1□□□□□ -1.59
BRCA1-214ENST00000477152 PTTG2Q9NZH5 202 aa5.1□□□□□ -1.59
BRCA1-214ENST00000477152 NACAE9PAV3 2078 aa5.1□□□□□ -1.59
BRCA1-214ENST00000477152 HERC2O95714 4834 aa5.1□□□□□ -1.59
BRCA1-214ENST00000477152 A0A1W2PPQ1 181 aa5.09□□□□□ -1.59
BRCA1-214ENST00000477152 CENPXA8MT69 81 aa5.09□□□□□ -1.59
BRCA1-214ENST00000477152 RLN2P04090 185 aa5.09□□□□□ -1.59
BRCA1-214ENST00000477152 SMIM18P0DKX4 95 aa5.09□□□□□ -1.59
BRCA1-214ENST00000477152 HTN1P15515 57 aa5.09□□□□□ -1.59
BRCA1-214ENST00000477152 ACOT7LQ6ZUV0 252 aa5.09□□□□□ -1.59
BRCA1-214ENST00000477152 BPIFA4PQ86YQ2 179 aa5.09□□□□□ -1.59
BRCA1-214ENST00000477152 GNPNAT1Q96EK6 184 aaPredicted RBP5.09□□□□□ -1.59
BRCA1-214ENST00000477152 SMIM8Q96KF7 97 aa5.09□□□□□ -1.59
BRCA1-214ENST00000477152 PXMP4Q9Y6I8 212 aa5.09□□□□□ -1.59
BRCA1-214ENST00000477152 DNAH6Q9C0G6 4158 aa5.09□□□□□ -1.59
BRCA1-214ENST00000477152 FRAS1Q86XX4 4008 aa5.09□□□□□ -1.59
BRCA1-214ENST00000477152 IGKV1OR2-108A0A075B7D4 117 aa5.09□□□□□ -1.6
BRCA1-214ENST00000477152 H3BNG1 76 aa5.09□□□□□ -1.6
BRCA1-214ENST00000477152 LEPP41159 167 aa5.09□□□□□ -1.6
BRCA1-214ENST00000477152 TAS2R30P59541 319 aa5.09□□□□□ -1.6
BRCA1-214ENST00000477152 GUK1Q16774 197 aa5.09□□□□□ -1.6
BRCA1-214ENST00000477152 C12orf45Q8N5I9 185 aaPredicted RBP5.09□□□□□ -1.6
BRCA1-214ENST00000477152 RPUSD4Q96CM3 377 aaKnown RBP5.09□□□□□ -1.6
BRCA1-214ENST00000477152 GGACTQ9BVM4 153 aa5.09□□□□□ -1.6
BRCA1-214ENST00000477152 ARL6Q9H0F7 186 aa5.09□□□□□ -1.6
BRCA1-214ENST00000477152 VPS13DQ5THJ4 4388 aa5.08□□□□□ -1.6
BRCA1-214ENST00000477152 PRSS46E5RG02 174 aa5.08□□□□□ -1.6
BRCA1-214ENST00000477152 CRXO43186 299 aaPredicted RBP5.08□□□□□ -1.6
BRCA1-214ENST00000477152 COX7A2P2O60397 106 aa5.08□□□□□ -1.6
BRCA1-214ENST00000477152 CXCL3P19876 107 aa5.08□□□□□ -1.6
BRCA1-214ENST00000477152 M6PRP20645 277 aa5.08□□□□□ -1.6
BRCA1-214ENST00000477152 GATA2P23769 480 aaPredicted RBP5.08□□□□□ -1.6
BRCA1-214ENST00000477152 PPP1R1AQ13522 171 aa5.08□□□□□ -1.6
BRCA1-214ENST00000477152 OR5I1Q13606 314 aa5.08□□□□□ -1.6
BRCA1-214ENST00000477152 SPANXN2Q5MJ10 180 aa5.08□□□□□ -1.6
BRCA1-214ENST00000477152 Q6ZRG5 221 aa5.08□□□□□ -1.6
BRCA1-214ENST00000477152 SSX7Q7RTT5 188 aa5.08□□□□□ -1.6
BRCA1-214ENST00000477152 ZNF575Q86XF7 245 aa5.08□□□□□ -1.6
BRCA1-214ENST00000477152 BAP18Q8IXM2 172 aa5.08□□□□□ -1.6
BRCA1-214ENST00000477152 RNF182Q8N6D2 247 aa5.08□□□□□ -1.6
BRCA1-214ENST00000477152 ZNRF2Q8NHG8 242 aa5.08□□□□□ -1.6
BRCA1-214ENST00000477152 RXFP4Q8TDU9 374 aa5.08□□□□□ -1.6
BRCA1-214ENST00000477152 SOSTQ9BQB4 213 aa5.08□□□□□ -1.6
BRCA1-214ENST00000477152 ARV1Q9H2C2 271 aa5.08□□□□□ -1.6
BRCA1-214ENST00000477152 Q9H8V8 135 aa5.08□□□□□ -1.6
BRCA1-214ENST00000477152 TRAV12-2A0A075B6T6 113 aa5.07□□□□□ -1.6
BRCA1-214ENST00000477152 TRAV8-2A0A0B4J237 113 aa5.07□□□□□ -1.6
BRCA1-214ENST00000477152 H3BP45 60 aa5.07□□□□□ -1.6
BRCA1-214ENST00000477152 K7EPK0 472 aa5.07□□□□□ -1.6
BRCA1-214ENST00000477152 L7N2F9 121 aa5.07□□□□□ -1.6
BRCA1-214ENST00000477152 SSSCA1O60232 199 aa5.07□□□□□ -1.6
BRCA1-214ENST00000477152 TSC22D2O75157 780 aa5.07□□□□□ -1.6
BRCA1-214ENST00000477152 ZNF846Q147U1 533 aa5.07□□□□□ -1.6
BRCA1-214ENST00000477152 TRIQKQ629K1 86 aa5.07□□□□□ -1.6
BRCA1-214ENST00000477152 MAPKAPK5-AS1Q8N8E1 139 aa5.07□□□□□ -1.6
BRCA1-214ENST00000477152 OR1L4Q8NGR5 311 aa5.07□□□□□ -1.6
BRCA1-214ENST00000477152 SLIRPQ9GZT3 109 aaKnown RBP5.07□□□□□ -1.6
BRCA1-214ENST00000477152 NOP10Q9NPE3 64 aaKnown RBP5.07□□□□□ -1.6
BRCA1-214ENST00000477152 C9orf170A2RU37 121 aa5.07□□□□□ -1.6
BRCA1-214ENST00000477152 CCDC160A6NGH7 325 aa5.07□□□□□ -1.6
BRCA1-214ENST00000477152 USP17L23D6RBM5 183 aa5.07□□□□□ -1.6
BRCA1-214ENST00000477152 PVALBP20472 110 aaPredicted RBP5.07□□□□□ -1.6
BRCA1-214ENST00000477152 C10orf25Q5T742 122 aa5.07□□□□□ -1.6
BRCA1-214ENST00000477152 LINC00305Q7Z4B0 112 aa5.07□□□□□ -1.6
BRCA1-214ENST00000477152 ZNF680Q8NEM1 530 aa5.07□□□□□ -1.6
BRCA1-214ENST00000477152 TMEM18Q96B42 140 aa5.07□□□□□ -1.6
BRCA1-214ENST00000477152 ODF3Q96PU9 254 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms