RNA–Protein interactions for RNA: ENST00000476513.1

APOBEC3F-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 3

Gene APOBEC3F, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-203ENST00000476513 FAM30AQ9NZY2 134 aa11.09□□□□□ -0.63
APOBEC3F-203ENST00000476513 STRAPQ9Y3F4 350 aaKnown RBP11.09□□□□□ -0.63
APOBEC3F-203ENST00000476513 PIGBOS1A0A0B4J2F0 54 aa11.08□□□□□ -0.64
APOBEC3F-203ENST00000476513 ANKRD20A5PA0PJZ0 165 aa11.08□□□□□ -0.64
APOBEC3F-203ENST00000476513 SLC17A3O00476 420 aa11.08□□□□□ -0.64
APOBEC3F-203ENST00000476513 ZNF680Q8NEM1 530 aa11.08□□□□□ -0.64
APOBEC3F-203ENST00000476513 NAA50Q9GZZ1 169 aaKnown RBP11.08□□□□□ -0.64
APOBEC3F-203ENST00000476513 ARL6Q9H0F7 186 aa11.08□□□□□ -0.64
APOBEC3F-203ENST00000476513 ARV1Q9H2C2 271 aa11.08□□□□□ -0.64
APOBEC3F-203ENST00000476513 PRO0255Q9UI72 69 aa11.08□□□□□ -0.64
APOBEC3F-203ENST00000476513 CCDC160A6NGH7 325 aa11.07□□□□□ -0.64
APOBEC3F-203ENST00000476513 H3BTX0 84 aa11.07□□□□□ -0.64
APOBEC3F-203ENST00000476513 K7EP13 123 aa11.07□□□□□ -0.64
APOBEC3F-203ENST00000476513 CTDSPLO15194 276 aa11.07□□□□□ -0.64
APOBEC3F-203ENST00000476513 SPINK4O60575 86 aa11.07□□□□□ -0.64
APOBEC3F-203ENST00000476513 IGHV3-53P01767 116 aa11.07□□□□□ -0.64
APOBEC3F-203ENST00000476513 PLA2G1BP04054 148 aaKnown RBP11.07□□□□□ -0.64
APOBEC3F-203ENST00000476513 MRPL23Q16540 153 aaKnown RBP11.07□□□□□ -0.64
APOBEC3F-203ENST00000476513 TEPPQ6URK8 271 aa11.07□□□□□ -0.64
APOBEC3F-203ENST00000476513 WFDC10BQ8IUB3 73 aa11.07□□□□□ -0.64
APOBEC3F-203ENST00000476513 SYT8Q8NBV8 401 aa11.07□□□□□ -0.64
APOBEC3F-203ENST00000476513 NTN5Q8WTR8 489 aaPredicted RBP11.07□□□□□ -0.64
APOBEC3F-203ENST00000476513 ST6GAL2Q96JF0 529 aa11.07□□□□□ -0.64
APOBEC3F-203ENST00000476513 ODF3Q96PU9 254 aa11.07□□□□□ -0.64
APOBEC3F-203ENST00000476513 MCUBQ9NWR8 336 aa11.07□□□□□ -0.64
APOBEC3F-203ENST00000476513 RNF24Q9Y225 148 aa11.07□□□□□ -0.64
APOBEC3F-203ENST00000476513 KLF12Q9Y4X4 402 aa11.07□□□□□ -0.64
APOBEC3F-203ENST00000476513 LRCOL1A6NCL2 159 aa11.06□□□□□ -0.64
APOBEC3F-203ENST00000476513 CTDSP2O14595 271 aa11.06□□□□□ -0.64
APOBEC3F-203ENST00000476513 RGS5O15539 181 aa11.06□□□□□ -0.64
APOBEC3F-203ENST00000476513 PRAF2O60831 178 aa11.06□□□□□ -0.64
APOBEC3F-203ENST00000476513 EVI2AP22794 236 aa11.06□□□□□ -0.64
APOBEC3F-203ENST00000476513 CRYBA4P53673 196 aa11.06□□□□□ -0.64
APOBEC3F-203ENST00000476513 CTF1Q16619 201 aa11.06□□□□□ -0.64
APOBEC3F-203ENST00000476513 NEGR1Q7Z3B1 354 aa11.06□□□□□ -0.64
APOBEC3F-203ENST00000476513 LRTM2Q8N967 370 aa11.06□□□□□ -0.64
APOBEC3F-203ENST00000476513 LINC00305Q7Z4B0 112 aa11.05□□□□□ -0.64
APOBEC3F-203ENST00000476513 DEFB104AQ8WTQ1 72 aa11.05□□□□□ -0.64
APOBEC3F-203ENST00000476513 C8orf49Q96NF6 230 aa11.05□□□□□ -0.64
APOBEC3F-203ENST00000476513 RABL2BQ9UNT1 228 aa11.05□□□□□ -0.64
APOBEC3F-203ENST00000476513 DNAH8Q96JB1 4490 aa11.05□□□□□ -0.64
APOBEC3F-203ENST00000476513 C7orf71A4D174 169 aa11.04□□□□□ -0.64
APOBEC3F-203ENST00000476513 K7EPK0 472 aa11.04□□□□□ -0.64
APOBEC3F-203ENST00000476513 SLC25A5P05141 298 aaKnown RBP11.04□□□□□ -0.64
APOBEC3F-203ENST00000476513 TMBIM6P55061 237 aa11.04□□□□□ -0.64
APOBEC3F-203ENST00000476513 TCL1AP56279 114 aa11.04□□□□□ -0.64
APOBEC3F-203ENST00000476513 SLAQ13239 276 aa11.04□□□□□ -0.64
APOBEC3F-203ENST00000476513 IL18Q14116 193 aa11.04□□□□□ -0.64
APOBEC3F-203ENST00000476513 FHL2Q14192 279 aa11.04□□□□□ -0.64
APOBEC3F-203ENST00000476513 ANXA2RQ3ZCQ2 193 aa11.04□□□□□ -0.64
APOBEC3F-203ENST00000476513 TMEM128Q5BJH2 165 aa11.04□□□□□ -0.64
APOBEC3F-203ENST00000476513 BPIFA4PQ86YQ2 179 aa11.04□□□□□ -0.64
APOBEC3F-203ENST00000476513 SAT2Q96F10 170 aaPredicted RBP11.04□□□□□ -0.64
APOBEC3F-203ENST00000476513 BCL7BQ9BQE9 202 aa11.04□□□□□ -0.64
APOBEC3F-203ENST00000476513 HHLA3Q9XRX5 114 aa11.04□□□□□ -0.64
APOBEC3F-203ENST00000476513 PXMP4Q9Y6I8 212 aa11.04□□□□□ -0.64
APOBEC3F-203ENST00000476513 CCNKO75909 580 aa11.03□□□□□ -0.64
APOBEC3F-203ENST00000476513 CRYGDP07320 174 aa11.03□□□□□ -0.64
APOBEC3F-203ENST00000476513 VAMP1P23763 118 aa11.03□□□□□ -0.64
APOBEC3F-203ENST00000476513 RRAS2P62070 204 aaPredicted RBP11.03□□□□□ -0.64
APOBEC3F-203ENST00000476513 SLC38A11Q08AI6 406 aa11.03□□□□□ -0.64
APOBEC3F-203ENST00000476513 C4orf46Q504U0 113 aa11.03□□□□□ -0.64
APOBEC3F-203ENST00000476513 EIF4E3Q8N5X7 224 aaKnown RBP11.03□□□□□ -0.64
APOBEC3F-203ENST00000476513 MRPL16Q9NX20 251 aaKnown RBP11.03□□□□□ -0.64
APOBEC3F-203ENST00000476513 H3BQ15 152 aa11.02□□□□□ -0.65
APOBEC3F-203ENST00000476513 PSCAO43653 123 aa11.02□□□□□ -0.65
APOBEC3F-203ENST00000476513 NOL3O60936 208 aaKnown RBP11.02□□□□□ -0.65
APOBEC3F-203ENST00000476513 HOXB5P09067 269 aa11.02□□□□□ -0.65
APOBEC3F-203ENST00000476513 IGLC2P0DOY2 106 aa11.02□□□□□ -0.65
APOBEC3F-203ENST00000476513 CD300CQ08708 224 aa11.02□□□□□ -0.65
APOBEC3F-203ENST00000476513 PXDC1Q5TGL8 231 aa11.02□□□□□ -0.65
APOBEC3F-203ENST00000476513 MORN5Q5VZ52 161 aa11.02□□□□□ -0.65
APOBEC3F-203ENST00000476513 LINC00528Q8N1L1 170 aa11.02□□□□□ -0.65
APOBEC3F-203ENST00000476513 RAB2BQ8WUD1 216 aa11.02□□□□□ -0.65
APOBEC3F-203ENST00000476513 DIRAS2Q96HU8 199 aa11.02□□□□□ -0.65
APOBEC3F-203ENST00000476513 VGLL1Q99990 258 aa11.02□□□□□ -0.65
APOBEC3F-203ENST00000476513 NPVFQ9HCQ7 196 aa11.02□□□□□ -0.65
APOBEC3F-203ENST00000476513 PSENENQ9NZ42 101 aa11.02□□□□□ -0.65
APOBEC3F-203ENST00000476513 E5RGE8 158 aa11.01□□□□□ -0.65
APOBEC3F-203ENST00000476513 C1QBP02746 253 aa11.01□□□□□ -0.65
APOBEC3F-203ENST00000476513 POLR2GP62487 172 aaKnown RBP eCLIP11.01□□□□□ -0.65
APOBEC3F-203ENST00000476513 ID3Q02535 119 aa11.01□□□□□ -0.65
APOBEC3F-203ENST00000476513 BTN1A1Q13410 526 aa11.01□□□□□ -0.65
APOBEC3F-203ENST00000476513 OPCMLQ14982 345 aa11.01□□□□□ -0.65
APOBEC3F-203ENST00000476513 C10orf126Q8N4M7 172 aa11.01□□□□□ -0.65
APOBEC3F-203ENST00000476513 Q8N814 137 aa11.01□□□□□ -0.65
APOBEC3F-203ENST00000476513 MRPL32Q9BYC8 188 aaKnown RBP11.01□□□□□ -0.65
APOBEC3F-203ENST00000476513 TP53TG3Q9ULZ0 132 aa11.01□□□□□ -0.65
APOBEC3F-203ENST00000476513 LRP1Q07954 4544 aaKnown RBP11□□□□□ -0.65
APOBEC3F-203ENST00000476513 KLLNB2CW77 178 aa11□□□□□ -0.65
APOBEC3F-203ENST00000476513 H3BMQ9 156 aa11□□□□□ -0.65
APOBEC3F-203ENST00000476513 K7EQD1 137 aa11□□□□□ -0.65
APOBEC3F-203ENST00000476513 GOSR2O14653 212 aa11□□□□□ -0.65
APOBEC3F-203ENST00000476513 SRIP30626 198 aa11□□□□□ -0.65
APOBEC3F-203ENST00000476513 ERCC8Q13216 396 aa11□□□□□ -0.65
APOBEC3F-203ENST00000476513 IBA57Q5T440 356 aaKnown RBP11□□□□□ -0.65
APOBEC3F-203ENST00000476513 TMEM37Q8WXS4 190 aa11□□□□□ -0.65
APOBEC3F-203ENST00000476513 CCDC59Q9P031 241 aaKnown RBP11□□□□□ -0.65
APOBEC3F-203ENST00000476513 RABL2AQ9UBK7 228 aaPredicted RBP11□□□□□ -0.65
APOBEC3F-203ENST00000476513 PLA2G2DQ9UNK4 145 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 116.3 ms