RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 BAP18Q8IXM2 172 aa11.61□□□□□ -0.55
COL1A1-205ENST00000476387 SMIM3Q9BZL3 60 aa11.61□□□□□ -0.55
COL1A1-205ENST00000476387 MED28Q9H204 178 aa11.61□□□□□ -0.55
COL1A1-205ENST00000476387 TMEM14CQ9P0S9 112 aa11.61□□□□□ -0.55
COL1A1-205ENST00000476387 DNAH6Q9C0G6 4158 aa11.6□□□□□ -0.55
COL1A1-205ENST00000476387 IGHV4-4A0A075B6R2 117 aa11.6□□□□□ -0.55
COL1A1-205ENST00000476387 PRB4P10163 310 aaPredicted RBP11.6□□□□□ -0.55
COL1A1-205ENST00000476387 HIST1H1EP10412 219 aaKnown RBP11.6□□□□□ -0.55
COL1A1-205ENST00000476387 ZNF767PQ75MW2 155 aa11.6□□□□□ -0.55
COL1A1-205ENST00000476387 SCGB1C1Q8TD33 95 aa11.6□□□□□ -0.55
COL1A1-205ENST00000476387 SAT2Q96F10 170 aaPredicted RBP11.6□□□□□ -0.55
COL1A1-205ENST00000476387 MRPL32Q9BYC8 188 aaKnown RBP11.6□□□□□ -0.55
COL1A1-205ENST00000476387 ZNF586Q9NXT0 402 aa11.6□□□□□ -0.55
COL1A1-205ENST00000476387 VPS13DQ5THJ4 4388 aa11.6□□□□□ -0.55
COL1A1-205ENST00000476387 TRBV19A0A075B6N1 114 aa11.59□□□□□ -0.55
COL1A1-205ENST00000476387 TRAV12-2A0A075B6T6 113 aa11.59□□□□□ -0.55
COL1A1-205ENST00000476387 CRXO43186 299 aaPredicted RBP11.59□□□□□ -0.55
COL1A1-205ENST00000476387 PYYP10082 97 aa11.59□□□□□ -0.55
COL1A1-205ENST00000476387 PDE6HQ13956 83 aa11.59□□□□□ -0.55
COL1A1-205ENST00000476387 C12orf74Q32Q52 190 aa11.59□□□□□ -0.55
COL1A1-205ENST00000476387 TIMM9Q9Y5J7 89 aa11.59□□□□□ -0.55
COL1A1-205ENST00000476387 DEFB131BA0A096LNP1 70 aa11.58□□□□□ -0.56
COL1A1-205ENST00000476387 TSPOP30536 169 aa11.58□□□□□ -0.56
COL1A1-205ENST00000476387 CDKN1BP46527 198 aa11.58□□□□□ -0.56
COL1A1-205ENST00000476387 FCN2Q15485 313 aa11.58□□□□□ -0.56
COL1A1-205ENST00000476387 MIR17HGQ75NE6 70 aa11.58□□□□□ -0.56
COL1A1-205ENST00000476387 TMEM256Q8N2U0 113 aa11.58□□□□□ -0.56
COL1A1-205ENST00000476387 BLNKQ8WV28 456 aa11.58□□□□□ -0.56
COL1A1-205ENST00000476387 MRPL53Q96EL3 112 aaKnown RBP11.58□□□□□ -0.56
COL1A1-205ENST00000476387 SLC25A2Q9BXI2 301 aa11.58□□□□□ -0.56
COL1A1-205ENST00000476387 PRAC2D3DTV9 90 aa11.57□□□□□ -0.56
COL1A1-205ENST00000476387 FFAR4Q5NUL3 377 aa11.57□□□□□ -0.56
COL1A1-205ENST00000476387 FAM222AQ5U5X8 452 aa11.57□□□□□ -0.56
COL1A1-205ENST00000476387 AAMDCQ9H7C9 122 aa11.57□□□□□ -0.56
COL1A1-205ENST00000476387 DKK2Q9UBU2 259 aa11.57□□□□□ -0.56
COL1A1-205ENST00000476387 FUT9Q9Y231 359 aa11.57□□□□□ -0.56
COL1A1-205ENST00000476387 PRELID1Q9Y255 219 aa11.57□□□□□ -0.56
COL1A1-205ENST00000476387 YTHDF2Q9Y5A9 579 aaKnown RBP11.57□□□□□ -0.56
COL1A1-205ENST00000476387 DNAH10Q8IVF4 4471 aa11.57□□□□□ -0.56
COL1A1-205ENST00000476387 ZNF705GA8MUZ8 300 aaPredicted RBP11.56□□□□□ -0.56
COL1A1-205ENST00000476387 OR7C2O60412 319 aa11.56□□□□□ -0.56
COL1A1-205ENST00000476387 RGS21Q2M5E4 152 aa11.56□□□□□ -0.56
COL1A1-205ENST00000476387 FAM167A-AS1Q96KT0 104 aa11.56□□□□□ -0.56
COL1A1-205ENST00000476387 LINC01587Q99440 93 aa11.56□□□□□ -0.56
COL1A1-205ENST00000476387 NIPSNAP3BQ9BS92 247 aa11.56□□□□□ -0.56
COL1A1-205ENST00000476387 PAXXQ9BUH6 204 aa11.56□□□□□ -0.56
COL1A1-205ENST00000476387 PARD6GQ9BYG4 376 aaPredicted RBP11.56□□□□□ -0.56
COL1A1-205ENST00000476387 OR51M1Q9H341 326 aa11.56□□□□□ -0.56
COL1A1-205ENST00000476387 HECTD4Q9Y4D8 3996 aa11.55□□□□□ -0.56
COL1A1-205ENST00000476387 NDUFB4O95168 129 aa11.55□□□□□ -0.56
COL1A1-205ENST00000476387 LEPP41159 167 aa11.55□□□□□ -0.56
COL1A1-205ENST00000476387 ASB13Q8WXK3 278 aa11.55□□□□□ -0.56
COL1A1-205ENST00000476387 NPIPB6E9PJ23 425 aa11.54□□□□□ -0.56
COL1A1-205ENST00000476387 M0R3E3 92 aa11.54□□□□□ -0.56
COL1A1-205ENST00000476387 GIPP09681 153 aaPredicted RBP11.54□□□□□ -0.56
COL1A1-205ENST00000476387 OR10J4P0C629 311 aa11.54□□□□□ -0.56
COL1A1-205ENST00000476387 NBEAP1P0C6P0 100 aa11.54□□□□□ -0.56
COL1A1-205ENST00000476387 TAS2R45P59539 299 aa11.54□□□□□ -0.56
COL1A1-205ENST00000476387 TAS2R60P59551 318 aa11.54□□□□□ -0.56
COL1A1-205ENST00000476387 DAD1P61803 113 aa11.54□□□□□ -0.56
COL1A1-205ENST00000476387 KHDC3LQ587J8 217 aa11.54□□□□□ -0.56
COL1A1-205ENST00000476387 EXOC3-AS1Q8N2X6 119 aa11.54□□□□□ -0.56
COL1A1-205ENST00000476387 ODF3Q96PU9 254 aa11.54□□□□□ -0.56
COL1A1-205ENST00000476387 C20orf144Q9BQM9 153 aa11.54□□□□□ -0.56
COL1A1-205ENST00000476387 NDUFAF3Q9BU61 184 aa11.54□□□□□ -0.56
COL1A1-205ENST00000476387 WFDC1Q9HC57 220 aa11.54□□□□□ -0.56
COL1A1-205ENST00000476387 H7BYZ3 331 aa11.53□□□□□ -0.56
COL1A1-205ENST00000476387 P0DMU3 169 aa11.53□□□□□ -0.56
COL1A1-205ENST00000476387 FAM231AP0DMU4 169 aa11.53□□□□□ -0.56
COL1A1-205ENST00000476387 FAM231CP0DMU5 169 aa11.53□□□□□ -0.56
COL1A1-205ENST00000476387 HTN1P15515 57 aa11.53□□□□□ -0.56
COL1A1-205ENST00000476387 UBE2L3P68036 154 aaKnown RBP11.53□□□□□ -0.56
COL1A1-205ENST00000476387 ZNF266Q14584 549 aa11.53□□□□□ -0.56
COL1A1-205ENST00000476387 ICAM4Q14773 271 aa11.53□□□□□ -0.56
COL1A1-205ENST00000476387 ACOT6Q3I5F7 207 aaPredicted RBP11.53□□□□□ -0.56
COL1A1-205ENST00000476387 RNF141Q8WVD5 230 aa11.53□□□□□ -0.56
COL1A1-205ENST00000476387 FAM210BQ96KR6 192 aa11.53□□□□□ -0.56
COL1A1-205ENST00000476387 LYRM9A8MSI8 78 aa11.52□□□□□ -0.57
COL1A1-205ENST00000476387 J3KRW8 73 aa11.52□□□□□ -0.57
COL1A1-205ENST00000476387 PRM2P04554 102 aa11.52□□□□□ -0.57
COL1A1-205ENST00000476387 HTN3P15516 51 aa11.52□□□□□ -0.57
COL1A1-205ENST00000476387 OXA1LQ15070 435 aa11.52□□□□□ -0.57
COL1A1-205ENST00000476387 GFI1BQ5VTD9 330 aa11.52□□□□□ -0.57
COL1A1-205ENST00000476387 FAM122CQ6P4D5 195 aa11.52□□□□□ -0.57
COL1A1-205ENST00000476387 FXYD5Q96DB9 178 aa11.52□□□□□ -0.57
COL1A1-205ENST00000476387 C16orf74Q96GX8 76 aa11.52□□□□□ -0.57
COL1A1-205ENST00000476387 AQP10Q96PS8 301 aa11.52□□□□□ -0.57
COL1A1-205ENST00000476387 CT45A10P0DMU9 189 aa11.51□□□□□ -0.57
COL1A1-205ENST00000476387 M6PRP20645 277 aa11.51□□□□□ -0.57
COL1A1-205ENST00000476387 POM121L12Q8N7R1 296 aa11.51□□□□□ -0.57
COL1A1-205ENST00000476387 PHYHIPLQ96FC7 376 aa11.51□□□□□ -0.57
COL1A1-205ENST00000476387 A0A1W2PPV4 95 aa11.5□□□□□ -0.57
COL1A1-205ENST00000476387 AZU1P20160 251 aa11.5□□□□□ -0.57
COL1A1-205ENST00000476387 CSN1S1P47710 185 aa11.5□□□□□ -0.57
COL1A1-205ENST00000476387 ERCC8Q13216 396 aa11.5□□□□□ -0.57
COL1A1-205ENST00000476387 KIR3DS1Q14943 382 aa11.5□□□□□ -0.57
COL1A1-205ENST00000476387 TMEM78Q5T7P6 136 aa11.5□□□□□ -0.57
COL1A1-205ENST00000476387 ZNF493Q6ZR52 646 aa11.5□□□□□ -0.57
COL1A1-205ENST00000476387 LINC00336Q6ZUF6 198 aa11.5□□□□□ -0.57
COL1A1-205ENST00000476387 INO80EQ8NBZ0 244 aaPredicted RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 143.3 ms