RNA–Protein interactions for RNA: ENST00000475818.5

HDAC11-217, Transcript of histone deacetylase 11, humanhuman

TSL 3

Gene HDAC11, Length 1,271 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-217ENST00000475818 WRBO00258 174 aa13.49□□□□□ -0.25
HDAC11-217ENST00000475818 PITX3O75364 302 aa13.49□□□□□ -0.25
HDAC11-217ENST00000475818 CXCL2P19875 107 aa13.49□□□□□ -0.25
HDAC11-217ENST00000475818 SLC50A1Q9BRV3 221 aa13.49□□□□□ -0.25
HDAC11-217ENST00000475818 H3BP45 60 aa13.48□□□□□ -0.25
HDAC11-217ENST00000475818 K7EQD1 137 aa13.48□□□□□ -0.25
HDAC11-217ENST00000475818 RPP30P78346 268 aaKnown RBP13.48□□□□□ -0.25
HDAC11-217ENST00000475818 SLAQ13239 276 aa13.48□□□□□ -0.25
HDAC11-217ENST00000475818 SPANXN5Q5MJ07 72 aa13.48□□□□□ -0.25
HDAC11-217ENST00000475818 ZBTB8BQ8NAP8 495 aaPredicted RBP13.48□□□□□ -0.25
HDAC11-217ENST00000475818 ARL6Q9H0F7 186 aa13.48□□□□□ -0.25
HDAC11-217ENST00000475818 Q9H521 79 aa13.48□□□□□ -0.25
HDAC11-217ENST00000475818 TCL1AP56279 114 aa13.47□□□□□ -0.25
HDAC11-217ENST00000475818 PLP1P60201 277 aa13.47□□□□□ -0.25
HDAC11-217ENST00000475818 VBP1P61758 197 aa13.47□□□□□ -0.25
HDAC11-217ENST00000475818 MZT2AQ6P582 158 aa13.47□□□□□ -0.25
HDAC11-217ENST00000475818 PATE2Q6UY27 113 aa13.47□□□□□ -0.25
HDAC11-217ENST00000475818 SCXQ7RTU7 201 aa13.47□□□□□ -0.25
HDAC11-217ENST00000475818 EIF4E3Q8N5X7 224 aaKnown RBP13.47□□□□□ -0.25
HDAC11-217ENST00000475818 OR51S1Q8NGJ8 323 aa13.47□□□□□ -0.25
HDAC11-217ENST00000475818 VGLL1Q99990 258 aa13.47□□□□□ -0.25
HDAC11-217ENST00000475818 C7orf71A4D174 169 aa13.46□□□□□ -0.25
HDAC11-217ENST00000475818 PCNPQ8WW12 178 aaKnown RBP13.46□□□□□ -0.25
HDAC11-217ENST00000475818 ODF3Q96PU9 254 aa13.46□□□□□ -0.25
HDAC11-217ENST00000475818 CIB3Q96Q77 187 aaPredicted RBP13.46□□□□□ -0.25
HDAC11-217ENST00000475818 ARV1Q9H2C2 271 aa13.46□□□□□ -0.25
HDAC11-217ENST00000475818 TRGV4A0A0C4DH28 118 aa13.45□□□□□ -0.26
HDAC11-217ENST00000475818 MED6O75586 246 aa13.45□□□□□ -0.26
HDAC11-217ENST00000475818 GYPEP15421 78 aa13.45□□□□□ -0.26
HDAC11-217ENST00000475818 SRPXP78539 464 aa13.45□□□□□ -0.26
HDAC11-217ENST00000475818 BTN1A1Q13410 526 aa13.45□□□□□ -0.26
HDAC11-217ENST00000475818 WFDC2Q14508 124 aa13.45□□□□□ -0.26
HDAC11-217ENST00000475818 ANXA2RQ3ZCQ2 193 aa13.45□□□□□ -0.26
HDAC11-217ENST00000475818 S100A7AQ86SG5 101 aa13.45□□□□□ -0.26
HDAC11-217ENST00000475818 LRTM2Q8N967 370 aa13.45□□□□□ -0.26
HDAC11-217ENST00000475818 PRRT1Q99946 306 aa13.45□□□□□ -0.26
HDAC11-217ENST00000475818 MRPL32Q9BYC8 188 aaKnown RBP13.45□□□□□ -0.26
HDAC11-217ENST00000475818 TP53TG3Q9ULZ0 132 aa13.45□□□□□ -0.26
HDAC11-217ENST00000475818 SYNGR2O43760 224 aa13.44□□□□□ -0.26
HDAC11-217ENST00000475818 SLC25A5P05141 298 aaKnown RBP13.44□□□□□ -0.26
HDAC11-217ENST00000475818 AKAIN1P0CW23 69 aa13.44□□□□□ -0.26
HDAC11-217ENST00000475818 ANXA3P12429 323 aa13.44□□□□□ -0.26
HDAC11-217ENST00000475818 CD300CQ08708 224 aa13.44□□□□□ -0.26
HDAC11-217ENST00000475818 LINC01620Q4KN68 170 aa13.44□□□□□ -0.26
HDAC11-217ENST00000475818 CLVS1Q8IUQ0 354 aaPredicted RBP13.44□□□□□ -0.26
HDAC11-217ENST00000475818 TRAV5A0A0B4J249 113 aa13.43□□□□□ -0.26
HDAC11-217ENST00000475818 SFTA3P0C7M3 94 aa13.43□□□□□ -0.26
HDAC11-217ENST00000475818 RNASE4P34096 147 aaKnown RBP13.43□□□□□ -0.26
HDAC11-217ENST00000475818 SELENOTP62341 195 aa13.43□□□□□ -0.26
HDAC11-217ENST00000475818 C15orf40Q8WUR7 153 aa13.43□□□□□ -0.26
HDAC11-217ENST00000475818 STRAPQ9Y3F4 350 aaKnown RBP13.43□□□□□ -0.26
HDAC11-217ENST00000475818 SSBP1Q04837 148 aaKnown RBP13.42□□□□□ -0.26
HDAC11-217ENST00000475818 ERCC8Q13216 396 aa13.42□□□□□ -0.26
HDAC11-217ENST00000475818 LINC00305Q7Z4B0 112 aa13.42□□□□□ -0.26
HDAC11-217ENST00000475818 PKHD1L1Q86WI1 4243 aa13.41□□□□□ -0.26
HDAC11-217ENST00000475818 IGHV3-38A0A0C4DH36 116 aa13.41□□□□□ -0.26
HDAC11-217ENST00000475818 IBA57-AS1B1ANH7 110 aa13.41□□□□□ -0.26
HDAC11-217ENST00000475818 RRAS2P62070 204 aaPredicted RBP13.41□□□□□ -0.26
HDAC11-217ENST00000475818 IBA57Q5T440 356 aaKnown RBP13.41□□□□□ -0.26
HDAC11-217ENST00000475818 BPIFA4PQ86YQ2 179 aa13.41□□□□□ -0.26
HDAC11-217ENST00000475818 RNF24Q9Y225 148 aa13.41□□□□□ -0.26
HDAC11-217ENST00000475818 PXMP4Q9Y6I8 212 aa13.41□□□□□ -0.26
HDAC11-217ENST00000475818 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.4□□□□□ -0.26
HDAC11-217ENST00000475818 H3BQ15 152 aa13.4□□□□□ -0.26
HDAC11-217ENST00000475818 LECT2O14960 151 aa13.4□□□□□ -0.26
HDAC11-217ENST00000475818 MPDU1O75352 247 aa13.4□□□□□ -0.26
HDAC11-217ENST00000475818 SLC38A11Q08AI6 406 aa13.4□□□□□ -0.26
HDAC11-217ENST00000475818 ZNF479Q96JC4 524 aa13.4□□□□□ -0.26
HDAC11-217ENST00000475818 LRP2P98164 4655 aa13.39□□□□□ -0.27
HDAC11-217ENST00000475818 KLLNB2CW77 178 aa13.39□□□□□ -0.27
HDAC11-217ENST00000475818 RGS13O14921 159 aa13.39□□□□□ -0.27
HDAC11-217ENST00000475818 MORN5Q5VZ52 161 aa13.39□□□□□ -0.27
HDAC11-217ENST00000475818 Q6ZQT7 251 aa13.39□□□□□ -0.27
HDAC11-217ENST00000475818 AP3S1Q92572 193 aa13.39□□□□□ -0.27
HDAC11-217ENST00000475818 SAT2Q96F10 170 aaPredicted RBP13.39□□□□□ -0.27
HDAC11-217ENST00000475818 SCGB3A2Q96PL1 93 aa13.39□□□□□ -0.27
HDAC11-217ENST00000475818 TXNDC17Q9BRA2 123 aa13.39□□□□□ -0.27
HDAC11-217ENST00000475818 DUXBA0A1W2PPF3 345 aa13.38□□□□□ -0.27
HDAC11-217ENST00000475818 CCNKO75909 580 aa13.38□□□□□ -0.27
HDAC11-217ENST00000475818 ORM1P02763 201 aa13.38□□□□□ -0.27
HDAC11-217ENST00000475818 OR4E1P0C645 316 aa13.38□□□□□ -0.27
HDAC11-217ENST00000475818 IGLC2P0DOY2 106 aa13.38□□□□□ -0.27
HDAC11-217ENST00000475818 SLC25A6P12236 298 aa13.38□□□□□ -0.27
HDAC11-217ENST00000475818 LINC01556Q5JQF7 62 aa13.38□□□□□ -0.27
HDAC11-217ENST00000475818 BLNKQ8WV28 456 aa13.38□□□□□ -0.27
HDAC11-217ENST00000475818 SMIM4Q8WVI0 70 aa13.38□□□□□ -0.27
HDAC11-217ENST00000475818 ARPC5LQ9BPX5 153 aa13.38□□□□□ -0.27
HDAC11-217ENST00000475818 FUNDC2Q9BWH2 189 aa13.38□□□□□ -0.27
HDAC11-217ENST00000475818 SCP2D1Q9UJQ7 156 aa13.38□□□□□ -0.27
HDAC11-217ENST00000475818 LOC100131303A0A0U1RQF7 123 aa13.37□□□□□ -0.27
HDAC11-217ENST00000475818 IGHV3-30P01768 117 aa13.37□□□□□ -0.27
HDAC11-217ENST00000475818 IGHV3-33P01772 117 aa13.37□□□□□ -0.27
HDAC11-217ENST00000475818 IGHV3-30-3P0DP02 117 aa13.37□□□□□ -0.27
HDAC11-217ENST00000475818 IGHV3-30-5P0DP03 117 aa13.37□□□□□ -0.27
HDAC11-217ENST00000475818 MRPS10P82664 201 aaKnown RBP13.37□□□□□ -0.27
HDAC11-217ENST00000475818 OPCMLQ14982 345 aa13.37□□□□□ -0.27
HDAC11-217ENST00000475818 MIXL1Q9H2W2 232 aa13.37□□□□□ -0.27
HDAC11-217ENST00000475818 MCUBQ9NWR8 336 aa13.37□□□□□ -0.27
HDAC11-217ENST00000475818 PPT1P50897 306 aa13.36□□□□□ -0.27
HDAC11-217ENST00000475818 CHAC1Q9BUX1 264 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms