RNA–Protein interactions for RNA: ENST00000475255.5

SEMA4D-217, Transcript of semaphorin 4D, humanhuman

TSL 1 (best)

Gene SEMA4D, Length 3,053 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-217ENST00000475255 LGALS7P47929 136 aa10.81□□□□□ -0.68
SEMA4D-217ENST00000475255 IGFL2Q6UWQ7 119 aa10.81□□□□□ -0.68
SEMA4D-217ENST00000475255 HLA-DMBP28068 263 aa10.8□□□□□ -0.68
SEMA4D-217ENST00000475255 MC5RP33032 325 aa10.8□□□□□ -0.68
SEMA4D-217ENST00000475255 TMEM108Q6UXF1 575 aa10.8□□□□□ -0.68
SEMA4D-217ENST00000475255 C9orf118A6NHY6 69 aa10.8□□□□□ -0.68
SEMA4D-217ENST00000475255 I3L2K1 104 aa10.8□□□□□ -0.68
SEMA4D-217ENST00000475255 CT45A10P0DMU9 189 aa10.8□□□□□ -0.68
SEMA4D-217ENST00000475255 DLX6P56179 175 aa10.8□□□□□ -0.68
SEMA4D-217ENST00000475255 PSG3Q16557 428 aa10.8□□□□□ -0.68
SEMA4D-217ENST00000475255 TMEM30BQ3MIR4 351 aa10.8□□□□□ -0.68
SEMA4D-217ENST00000475255 MRPL51Q4U2R6 128 aaKnown RBP10.8□□□□□ -0.68
SEMA4D-217ENST00000475255 ZNF414Q96IQ9 312 aa10.8□□□□□ -0.68
SEMA4D-217ENST00000475255 IGHV1-3A0A0C4DH29 117 aa10.79□□□□□ -0.68
SEMA4D-217ENST00000475255 EVI2AP22794 236 aa10.79□□□□□ -0.68
SEMA4D-217ENST00000475255 TWIST1Q15672 202 aa10.79□□□□□ -0.68
SEMA4D-217ENST00000475255 TMEM155Q4W5P6 130 aa10.79□□□□□ -0.68
SEMA4D-217ENST00000475255 UFSP1Q6NVU6 142 aa10.79□□□□□ -0.68
SEMA4D-217ENST00000475255 DYNLRB1Q9NP97 96 aa10.79□□□□□ -0.68
SEMA4D-217ENST00000475255 TMEM189A5PLL7 270 aa10.79□□□□□ -0.68
SEMA4D-217ENST00000475255 NPIPB5A8MRT5 1133 aa10.79□□□□□ -0.68
SEMA4D-217ENST00000475255 SH2D1AO60880 128 aa10.79□□□□□ -0.68
SEMA4D-217ENST00000475255 APOBEC3AP31941 199 aaPredicted RBP10.79□□□□□ -0.68
SEMA4D-217ENST00000475255 CKS2P33552 79 aa10.79□□□□□ -0.68
SEMA4D-217ENST00000475255 SEC11AP67812 179 aa10.79□□□□□ -0.68
SEMA4D-217ENST00000475255 PAX2Q02962 417 aa10.79□□□□□ -0.68
SEMA4D-217ENST00000475255 DEFB123Q8N688 67 aa10.79□□□□□ -0.68
SEMA4D-217ENST00000475255 GTSF1LQ9H1H1 148 aa10.79□□□□□ -0.68
SEMA4D-217ENST00000475255 IGKV2D-26A0A0A0MRZ7 120 aa10.78□□□□□ -0.68
SEMA4D-217ENST00000475255 SMAD7O15105 426 aaKnown RBP10.78□□□□□ -0.68
SEMA4D-217ENST00000475255 GATA1P15976 413 aaPredicted RBP10.78□□□□□ -0.68
SEMA4D-217ENST00000475255 SCNM1Q9BWG6 230 aa10.78□□□□□ -0.68
SEMA4D-217ENST00000475255 BSNQ9UPA5 3926 aa10.78□□□□□ -0.68
SEMA4D-217ENST00000475255 FCER1GP30273 86 aa10.78□□□□□ -0.68
SEMA4D-217ENST00000475255 IFI27L1Q96BM0 104 aa10.78□□□□□ -0.68
SEMA4D-217ENST00000475255 VSTM5A8MXK1 200 aa10.78□□□□□ -0.68
SEMA4D-217ENST00000475255 K7EIM0 57 aa10.78□□□□□ -0.68
SEMA4D-217ENST00000475255 PRSS1P07477 247 aa10.78□□□□□ -0.68
SEMA4D-217ENST00000475255 FAM104BQ5XKR9 115 aa10.78□□□□□ -0.68
SEMA4D-217ENST00000475255 BOD1L2Q8IYS8 172 aa10.78□□□□□ -0.68
SEMA4D-217ENST00000475255 ORMDL3Q8N138 153 aa10.78□□□□□ -0.68
SEMA4D-217ENST00000475255 ZNF491Q8N8L2 437 aa10.78□□□□□ -0.68
SEMA4D-217ENST00000475255 SHANK2-AS3Q9BTD1 123 aa10.78□□□□□ -0.68
SEMA4D-217ENST00000475255 JKAMPQ9P055 326 aa10.78□□□□□ -0.68
SEMA4D-217ENST00000475255 CEP295Q9C0D2 2601 aa10.77□□□□□ -0.68
SEMA4D-217ENST00000475255 CRYGBP07316 175 aa10.77□□□□□ -0.68
SEMA4D-217ENST00000475255 HOXB4P17483 251 aaPredicted RBP10.77□□□□□ -0.68
SEMA4D-217ENST00000475255 LINC00311Q8N616 119 aa10.77□□□□□ -0.68
SEMA4D-217ENST00000475255 RNF125Q96EQ8 232 aa10.77□□□□□ -0.68
SEMA4D-217ENST00000475255 AGRNO00468 2067 aa10.77□□□□□ -0.69
SEMA4D-217ENST00000475255 ZNF80P51504 273 aaPredicted RBP10.77□□□□□ -0.69
SEMA4D-217ENST00000475255 SMAGPQ0VAQ4 97 aa10.77□□□□□ -0.69
SEMA4D-217ENST00000475255 LCNL1Q6ZST4 164 aa10.77□□□□□ -0.69
SEMA4D-217ENST00000475255 RPEQ96AT9 228 aa10.77□□□□□ -0.69
SEMA4D-217ENST00000475255 K7EP34 96 aa10.76□□□□□ -0.69
SEMA4D-217ENST00000475255 K7EQM0 130 aa10.76□□□□□ -0.69
SEMA4D-217ENST00000475255 NDUFS7O75251 213 aa10.76□□□□□ -0.69
SEMA4D-217ENST00000475255 THBDP07204 575 aa10.76□□□□□ -0.69
SEMA4D-217ENST00000475255 FTH1P19P0C7X4 201 aa10.76□□□□□ -0.69
SEMA4D-217ENST00000475255 EGR2P11161 476 aaPredicted RBP10.76□□□□□ -0.69
SEMA4D-217ENST00000475255 RPS20P60866 119 aaKnown RBP10.76□□□□□ -0.69
SEMA4D-217ENST00000475255 ADAMTSL5Q6ZMM2 481 aa10.76□□□□□ -0.69
SEMA4D-217ENST00000475255 H3BRM9 83 aa10.76□□□□□ -0.69
SEMA4D-217ENST00000475255 LY6HO94772 140 aa10.76□□□□□ -0.69
SEMA4D-217ENST00000475255 HBDP02042 147 aa10.76□□□□□ -0.69
SEMA4D-217ENST00000475255 FXYD2P54710 66 aa10.76□□□□□ -0.69
SEMA4D-217ENST00000475255 GTSCR1Q86UQ5 136 aa10.76□□□□□ -0.69
SEMA4D-217ENST00000475255 TMEM14CQ9P0S9 112 aa10.76□□□□□ -0.69
SEMA4D-217ENST00000475255 ANKHD1Q8IWZ3 2542 aaKnown RBP10.76□□□□□ -0.69
SEMA4D-217ENST00000475255 C16orf97H3BN30 126 aa10.76□□□□□ -0.69
SEMA4D-217ENST00000475255 H3BRN7 92 aa10.76□□□□□ -0.69
SEMA4D-217ENST00000475255 FABP2P12104 132 aa10.76□□□□□ -0.69
SEMA4D-217ENST00000475255 VGLL1Q99990 258 aa10.76□□□□□ -0.69
SEMA4D-217ENST00000475255 NHP2Q9NX24 153 aaKnown RBP10.76□□□□□ -0.69
SEMA4D-217ENST00000475255 A0A0G2JNJ9 132 aa10.75□□□□□ -0.69
SEMA4D-217ENST00000475255 TEX48A0A1B0GUV7 120 aa10.75□□□□□ -0.69
SEMA4D-217ENST00000475255 G3V4G9 280 aa10.75□□□□□ -0.69
SEMA4D-217ENST00000475255 RBPJQ06330 500 aa10.75□□□□□ -0.69
SEMA4D-217ENST00000475255 RNASE6Q93091 150 aaKnown RBP10.75□□□□□ -0.69
SEMA4D-217ENST00000475255 ABHD17AQ96GS6 310 aa10.75□□□□□ -0.69
SEMA4D-217ENST00000475255 Q9UFV3 132 aa10.75□□□□□ -0.69
SEMA4D-217ENST00000475255 BUB1B-PAK6H3BSN5 160 aa10.75□□□□□ -0.69
SEMA4D-217ENST00000475255 TIMM23O14925 209 aa10.75□□□□□ -0.69
SEMA4D-217ENST00000475255 HSD52Q0P140 79 aa10.75□□□□□ -0.69
SEMA4D-217ENST00000475255 SAMD5Q5TGI4 173 aa10.75□□□□□ -0.69
SEMA4D-217ENST00000475255 CHTOPQ9Y3Y2 248 aaKnown RBP10.75□□□□□ -0.69
SEMA4D-217ENST00000475255 A0A1W2PPM0 123 aa10.74□□□□□ -0.69
SEMA4D-217ENST00000475255 M0R296 226 aa10.74□□□□□ -0.69
SEMA4D-217ENST00000475255 ORM1P02763 201 aa10.74□□□□□ -0.69
SEMA4D-217ENST00000475255 Q5PR19 223 aa10.74□□□□□ -0.69
SEMA4D-217ENST00000475255 PVRIGQ6DKI7 326 aa10.74□□□□□ -0.69
SEMA4D-217ENST00000475255 LGALS9BQ3B8N2 356 aa10.74□□□□□ -0.69
SEMA4D-217ENST00000475255 LGALS9CQ6DKI2 356 aa10.74□□□□□ -0.69
SEMA4D-217ENST00000475255 NUP37Q8NFH4 326 aa10.74□□□□□ -0.69
SEMA4D-217ENST00000475255 IGHV3OR16-13A0A075B7E8 117 aa10.73□□□□□ -0.69
SEMA4D-217ENST00000475255 IGHV3-74A0A0B4J1X5 117 aa10.73□□□□□ -0.69
SEMA4D-217ENST00000475255 PPIAL4CA0A0B4J2A2 164 aa10.73□□□□□ -0.69
SEMA4D-217ENST00000475255 TNFRSF13BO14836 293 aaPredicted RBP10.73□□□□□ -0.69
SEMA4D-217ENST00000475255 IGLV1-47P01700 117 aa10.73□□□□□ -0.69
SEMA4D-217ENST00000475255 PPIAL4GP0DN37 164 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms