RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 MBP02144 154 aa5.11□□□□□ -1.59
LIMD1-204ENST00000474665 ARL14EPLP0DKL9 152 aa5.11□□□□□ -1.59
LIMD1-204ENST00000474665 HLA-DRB4P13762 266 aa5.11□□□□□ -1.59
LIMD1-204ENST00000474665 ID1P41134 155 aa5.11□□□□□ -1.59
LIMD1-204ENST00000474665 CMC4P56277 68 aaPredicted RBP5.11□□□□□ -1.59
LIMD1-204ENST00000474665 SNRPD3P62318 126 aaKnown RBP5.11□□□□□ -1.59
LIMD1-204ENST00000474665 PDE6HQ13956 83 aa5.11□□□□□ -1.59
LIMD1-204ENST00000474665 PSG3Q16557 428 aa5.11□□□□□ -1.59
LIMD1-204ENST00000474665 FOXI2Q6ZQN5 318 aa5.11□□□□□ -1.59
LIMD1-204ENST00000474665 SLC51BQ86UW2 128 aa5.11□□□□□ -1.59
LIMD1-204ENST00000474665 EXOC3-AS1Q8N2X6 119 aa5.11□□□□□ -1.59
LIMD1-204ENST00000474665 TM2D3Q9BRN9 247 aa5.11□□□□□ -1.59
LIMD1-204ENST00000474665 KRTAP4-5Q9BYR2 181 aa5.11□□□□□ -1.59
LIMD1-204ENST00000474665 TMPRSS5Q9H3S3 457 aa5.11□□□□□ -1.59
LIMD1-204ENST00000474665 SAV1Q9H4B6 383 aaPredicted RBP5.11□□□□□ -1.59
LIMD1-204ENST00000474665 TUBA4BQ9H853 241 aa5.11□□□□□ -1.59
LIMD1-204ENST00000474665 RETNQ9HD89 108 aa5.11□□□□□ -1.59
LIMD1-204ENST00000474665 RNF24Q9Y225 148 aa5.11□□□□□ -1.59
LIMD1-204ENST00000474665 HLA-DRB4X5D2U9 266 aa5.11□□□□□ -1.59
LIMD1-204ENST00000474665 LOC102724200A0A096LPH7 203 aaPredicted RBP5.1□□□□□ -1.59
LIMD1-204ENST00000474665 CTXND1A0A1B0GTU2 59 aa5.1□□□□□ -1.59
LIMD1-204ENST00000474665 A0A1W2PPV4 95 aa5.1□□□□□ -1.59
LIMD1-204ENST00000474665 TPT1P13693 172 aaKnown RBP5.1□□□□□ -1.59
LIMD1-204ENST00000474665 C4BPBP20851 252 aa5.1□□□□□ -1.59
LIMD1-204ENST00000474665 GCHFRP30047 84 aa5.1□□□□□ -1.59
LIMD1-204ENST00000474665 FGF8P55075 233 aaPredicted RBP5.1□□□□□ -1.59
LIMD1-204ENST00000474665 UBE2L3P68036 154 aaKnown RBP5.1□□□□□ -1.59
LIMD1-204ENST00000474665 GUK1Q16774 197 aa5.1□□□□□ -1.59
LIMD1-204ENST00000474665 KHDC3LQ587J8 217 aa5.1□□□□□ -1.59
LIMD1-204ENST00000474665 FAM74A1Q5RGS3 127 aa5.1□□□□□ -1.59
LIMD1-204ENST00000474665 AKR1C8PQ5T2L2 129 aa5.1□□□□□ -1.59
LIMD1-204ENST00000474665 SAMD13Q5VXD3 122 aa5.1□□□□□ -1.59
LIMD1-204ENST00000474665 PQLC2Q6ZP29 291 aa5.1□□□□□ -1.59
LIMD1-204ENST00000474665 CSNK1G2-AS1Q8NCQ2 148 aa5.1□□□□□ -1.59
LIMD1-204ENST00000474665 MBD3L1Q8WWY6 194 aa5.1□□□□□ -1.59
LIMD1-204ENST00000474665 RPUSD4Q96CM3 377 aaKnown RBP5.1□□□□□ -1.59
LIMD1-204ENST00000474665 RCHY1Q96PM5 261 aa5.1□□□□□ -1.59
LIMD1-204ENST00000474665 SLC50A1Q9BRV3 221 aa5.1□□□□□ -1.59
LIMD1-204ENST00000474665 ACTR3CQ9C0K3 210 aaPredicted RBP5.1□□□□□ -1.59
LIMD1-204ENST00000474665 KIR2DL5BA0A0G2JN68 375 aa5.09□□□□□ -1.59
LIMD1-204ENST00000474665 KIR2DL5BA0A0G2JPC4 375 aa5.09□□□□□ -1.59
LIMD1-204ENST00000474665 MAP1LC3B2A6NCE7 125 aa5.09□□□□□ -1.59
LIMD1-204ENST00000474665 UMAD1C9J7I0 102 aa5.09□□□□□ -1.59
LIMD1-204ENST00000474665 IGKV3-20P01619 116 aa5.09□□□□□ -1.59
LIMD1-204ENST00000474665 SULT1A2P50226 295 aa5.09□□□□□ -1.59
LIMD1-204ENST00000474665 CNN1P51911 297 aaKnown RBP5.09□□□□□ -1.59
LIMD1-204ENST00000474665 TAS2R45P59539 299 aa5.09□□□□□ -1.59
LIMD1-204ENST00000474665 RANP62826 216 aaKnown RBP5.09□□□□□ -1.59
LIMD1-204ENST00000474665 CCL20P78556 96 aa5.09□□□□□ -1.59
LIMD1-204ENST00000474665 ICAM4Q14773 271 aa5.09□□□□□ -1.59
LIMD1-204ENST00000474665 KIR3DS1Q14943 382 aa5.09□□□□□ -1.59
LIMD1-204ENST00000474665 KIR2DL5AQ8N109 375 aa5.09□□□□□ -1.59
LIMD1-204ENST00000474665 ZNF738Q8NE65 137 aa5.09□□□□□ -1.59
LIMD1-204ENST00000474665 OR8A1Q8NGG7 326 aa5.09□□□□□ -1.59
LIMD1-204ENST00000474665 KIR2DL5BQ8NHK3 375 aa5.09□□□□□ -1.59
LIMD1-204ENST00000474665 FAM213BQ8TBF2 198 aa5.09□□□□□ -1.59
LIMD1-204ENST00000474665 CLUHP3Q96NS8 147 aa5.09□□□□□ -1.59
LIMD1-204ENST00000474665 OVOL2Q9BRP0 275 aa5.09□□□□□ -1.59
LIMD1-204ENST00000474665 MAP1LC3BQ9GZQ8 125 aa5.09□□□□□ -1.59
LIMD1-204ENST00000474665 CSTL1Q9H114 145 aa5.09□□□□□ -1.59
LIMD1-204ENST00000474665 SLC35B3Q9H1N7 401 aa5.09□□□□□ -1.59
LIMD1-204ENST00000474665 Q9H3A6 140 aa5.09□□□□□ -1.59
LIMD1-204ENST00000474665 YTHDF2Q9Y5A9 579 aaKnown RBP5.09□□□□□ -1.59
LIMD1-204ENST00000474665 IGKV2-40A0A087WW87 121 aaPredicted RBP5.08□□□□□ -1.6
LIMD1-204ENST00000474665 TRAV1-1A0A0B4J248 108 aa5.08□□□□□ -1.6
LIMD1-204ENST00000474665 GGTLC3B5MD39 225 aa5.08□□□□□ -1.6
LIMD1-204ENST00000474665 NPIPB6E9PJ23 425 aa5.08□□□□□ -1.6
LIMD1-204ENST00000474665 CRXO43186 299 aaPredicted RBP5.08□□□□□ -1.6
LIMD1-204ENST00000474665 CXorf1O96002 111 aa5.08□□□□□ -1.6
LIMD1-204ENST00000474665 IGKV2D-40P01614 121 aaPredicted RBP5.08□□□□□ -1.6
LIMD1-204ENST00000474665 CT45A10P0DMU9 189 aa5.08□□□□□ -1.6
LIMD1-204ENST00000474665 FXYD7P58549 80 aa5.08□□□□□ -1.6
LIMD1-204ENST00000474665 EIF5AP63241 154 aaKnown RBP5.08□□□□□ -1.6
LIMD1-204ENST00000474665 PSG9Q00887 426 aa5.08□□□□□ -1.6
LIMD1-204ENST00000474665 ERCC8Q13216 396 aa5.08□□□□□ -1.6
LIMD1-204ENST00000474665 DEFB135Q30KP9 77 aa5.08□□□□□ -1.6
LIMD1-204ENST00000474665 ALKAL2Q6UX46 152 aa5.08□□□□□ -1.6
LIMD1-204ENST00000474665 STHQ8IWL8 128 aa5.08□□□□□ -1.6
LIMD1-204ENST00000474665 LYPD1Q8N2G4 141 aa5.08□□□□□ -1.6
LIMD1-204ENST00000474665 OR4B1Q8NGF8 309 aa5.08□□□□□ -1.6
LIMD1-204ENST00000474665 LRRC20Q8TCA0 184 aa5.08□□□□□ -1.6
LIMD1-204ENST00000474665 SFT2D1Q8WV19 159 aa5.08□□□□□ -1.6
LIMD1-204ENST00000474665 MRPL53Q96EL3 112 aaKnown RBP5.08□□□□□ -1.6
LIMD1-204ENST00000474665 VGLL1Q99990 258 aa5.08□□□□□ -1.6
LIMD1-204ENST00000474665 AGPAT4-IT1Q9H0P7 198 aa5.08□□□□□ -1.6
LIMD1-204ENST00000474665 CLEC5AQ9NY25 188 aa5.08□□□□□ -1.6
LIMD1-204ENST00000474665 PLECQ15149 4684 aaKnown RBP5.07□□□□□ -1.6
LIMD1-204ENST00000474665 PGPA6NDG6 321 aa5.07□□□□□ -1.6
LIMD1-204ENST00000474665 FAM74A7A6NL05 159 aa5.07□□□□□ -1.6
LIMD1-204ENST00000474665 M0R2Z0 102 aa5.07□□□□□ -1.6
LIMD1-204ENST00000474665 RBMY1A1P0DJD3 496 aaKnown RBP5.07□□□□□ -1.6
LIMD1-204ENST00000474665 RBMY1CP0DJD4 496 aa5.07□□□□□ -1.6
LIMD1-204ENST00000474665 GNG5P63218 68 aa5.07□□□□□ -1.6
LIMD1-204ENST00000474665 HIST1H1AQ02539 215 aaPredicted RBP5.07□□□□□ -1.6
LIMD1-204ENST00000474665 RBMY1FQ15415 496 aaKnown RBP5.07□□□□□ -1.6
LIMD1-204ENST00000474665 EBLN2Q6P2I7 272 aa5.07□□□□□ -1.6
LIMD1-204ENST00000474665 DPPA3Q6W0C5 159 aa5.07□□□□□ -1.6
LIMD1-204ENST00000474665 Q6ZWC4 215 aa5.07□□□□□ -1.6
LIMD1-204ENST00000474665 CCDC28AQ8IWP9 274 aa5.07□□□□□ -1.6
LIMD1-204ENST00000474665 RNF183Q96D59 192 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 151.4 ms