RNA–Protein interactions for RNA: ENST00000474564.1

COL12A1-206, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 3

Gene COL12A1, Length 499 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-206ENST00000474564 NAT8Q9UHE5 227 aa7.83□□□□□ -1.16
COL12A1-206ENST00000474564 SVEP1Q4LDE5 3571 aa7.82□□□□□ -1.16
COL12A1-206ENST00000474564 C2CD3Q4AC94 2353 aa7.82□□□□□ -1.16
COL12A1-206ENST00000474564 FBLL1A6NHQ2 334 aaKnown RBP7.82□□□□□ -1.16
COL12A1-206ENST00000474564 H3BTX0 84 aa7.82□□□□□ -1.16
COL12A1-206ENST00000474564 MRPS12O15235 138 aaKnown RBP7.82□□□□□ -1.16
COL12A1-206ENST00000474564 NDUFS6O75380 124 aaKnown RBP7.82□□□□□ -1.16
COL12A1-206ENST00000474564 IGLV1-51P01701 117 aa7.82□□□□□ -1.16
COL12A1-206ENST00000474564 S100A9P06702 114 aaKnown RBP7.82□□□□□ -1.16
COL12A1-206ENST00000474564 PNRC1Q12796 327 aaPredicted RBP7.82□□□□□ -1.16
COL12A1-206ENST00000474564 TMEM241Q24JQ0 296 aa7.82□□□□□ -1.16
COL12A1-206ENST00000474564 KRTAP21-3Q3LHN1 58 aa7.82□□□□□ -1.16
COL12A1-206ENST00000474564 FAM90A2PQ658T7 463 aa7.82□□□□□ -1.16
COL12A1-206ENST00000474564 EBLN2Q6P2I7 272 aa7.82□□□□□ -1.16
COL12A1-206ENST00000474564 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.82□□□□□ -1.16
COL12A1-206ENST00000474564 GTSCR1Q86UQ5 136 aa7.82□□□□□ -1.16
COL12A1-206ENST00000474564 CLRN3Q8NCR9 226 aa7.82□□□□□ -1.16
COL12A1-206ENST00000474564 ZNF738Q8NE65 137 aa7.82□□□□□ -1.16
COL12A1-206ENST00000474564 SPATA3Q8NHX4 192 aa7.82□□□□□ -1.16
COL12A1-206ENST00000474564 HIST1H2BAQ96A08 127 aa7.82□□□□□ -1.16
COL12A1-206ENST00000474564 MRPL53Q96EL3 112 aaKnown RBP7.82□□□□□ -1.16
COL12A1-206ENST00000474564 ZNF503Q96F45 646 aa7.82□□□□□ -1.16
COL12A1-206ENST00000474564 ZNF331Q9NQX6 463 aaPredicted RBP7.82□□□□□ -1.16
COL12A1-206ENST00000474564 PPP1R14DQ9NXH3 145 aa7.82□□□□□ -1.16
COL12A1-206ENST00000474564 SMAD5-AS1Q9Y6J3 95 aa7.82□□□□□ -1.16
COL12A1-206ENST00000474564 NDUFB4O95168 129 aa7.81□□□□□ -1.16
COL12A1-206ENST00000474564 RHEBQ15382 184 aa7.81□□□□□ -1.16
COL12A1-206ENST00000474564 PSG3Q16557 428 aa7.81□□□□□ -1.16
COL12A1-206ENST00000474564 TMEM61Q8N0U2 210 aa7.81□□□□□ -1.16
COL12A1-206ENST00000474564 OR10J6PQ8NGY7 276 aa7.81□□□□□ -1.16
COL12A1-206ENST00000474564 MDFIQ99750 246 aa7.81□□□□□ -1.16
COL12A1-206ENST00000474564 K7EQG2 157 aa7.8□□□□□ -1.16
COL12A1-206ENST00000474564 PEX7O00628 323 aa7.8□□□□□ -1.16
COL12A1-206ENST00000474564 SCO1O75880 301 aa7.8□□□□□ -1.16
COL12A1-206ENST00000474564 GNG4P50150 75 aa7.8□□□□□ -1.16
COL12A1-206ENST00000474564 C10orf91Q5T1B1 145 aa7.8□□□□□ -1.16
COL12A1-206ENST00000474564 EXOC3-AS1Q8N2X6 119 aa7.8□□□□□ -1.16
COL12A1-206ENST00000474564 C17orf77Q96MU5 243 aa7.8□□□□□ -1.16
COL12A1-206ENST00000474564 ATG101Q9BSB4 218 aa7.8□□□□□ -1.16
COL12A1-206ENST00000474564 EPDR1Q9UM22 224 aa7.8□□□□□ -1.16
COL12A1-206ENST00000474564 JMJD1CQ15652 2540 aa7.8□□□□□ -1.16
COL12A1-206ENST00000474564 B4DEV8 164 aa7.79□□□□□ -1.16
COL12A1-206ENST00000474564 GGTLC3B5MD39 225 aa7.79□□□□□ -1.16
COL12A1-206ENST00000474564 DUSP14O95147 198 aaKnown RBP7.79□□□□□ -1.16
COL12A1-206ENST00000474564 MGST1P10620 155 aaKnown RBP7.79□□□□□ -1.16
COL12A1-206ENST00000474564 IGLL1P15814 213 aa7.79□□□□□ -1.16
COL12A1-206ENST00000474564 EDN2P20800 178 aa7.79□□□□□ -1.16
COL12A1-206ENST00000474564 PSMG4Q5JS54 123 aa7.79□□□□□ -1.16
COL12A1-206ENST00000474564 ADAMTSL5Q6ZMM2 481 aa7.79□□□□□ -1.16
COL12A1-206ENST00000474564 DCANP1Q8TF63 244 aa7.79□□□□□ -1.16
COL12A1-206ENST00000474564 NDFIP1Q9BT67 221 aa7.79□□□□□ -1.16
COL12A1-206ENST00000474564 OR11H12B2RN74 326 aa7.78□□□□□ -1.16
COL12A1-206ENST00000474564 MT-ND4LP03901 98 aa7.78□□□□□ -1.16
COL12A1-206ENST00000474564 ZNF688P0C7X2 276 aa7.78□□□□□ -1.16
COL12A1-206ENST00000474564 RPL35P42766 123 aaKnown RBP7.78□□□□□ -1.16
COL12A1-206ENST00000474564 GNG5P63218 68 aa7.78□□□□□ -1.16
COL12A1-206ENST00000474564 BTN1A1Q13410 526 aa7.78□□□□□ -1.16
COL12A1-206ENST00000474564 TMEM78Q5T7P6 136 aa7.78□□□□□ -1.16
COL12A1-206ENST00000474564 C11orf52Q96A22 123 aa7.78□□□□□ -1.16
COL12A1-206ENST00000474564 SELENOKQ9Y6D0 94 aa7.78□□□□□ -1.16
COL12A1-206ENST00000474564 C7orf77A4D0Y5 90 aa7.77□□□□□ -1.17
COL12A1-206ENST00000474564 RBAKDNA6NC62 111 aa7.77□□□□□ -1.17
COL12A1-206ENST00000474564 DIRC3C9JPN6 131 aa7.77□□□□□ -1.17
COL12A1-206ENST00000474564 SLC17A3O00476 420 aa7.77□□□□□ -1.17
COL12A1-206ENST00000474564 TCRAP04437 139 aa7.77□□□□□ -1.17
COL12A1-206ENST00000474564 CENPWQ5EE01 88 aa7.77□□□□□ -1.17
COL12A1-206ENST00000474564 SAPCD1Q5SSQ6 148 aa7.77□□□□□ -1.17
COL12A1-206ENST00000474564 GOLT1AQ6ZVE7 132 aa7.77□□□□□ -1.17
COL12A1-206ENST00000474564 RNF182Q8N6D2 247 aa7.77□□□□□ -1.17
COL12A1-206ENST00000474564 FMC1Q96HJ9 113 aa7.77□□□□□ -1.17
COL12A1-206ENST00000474564 LINC00477Q96M19 166 aa7.77□□□□□ -1.17
COL12A1-206ENST00000474564 FAM110AQ9BQ89 295 aa7.77□□□□□ -1.17
COL12A1-206ENST00000474564 DERL1Q9BUN8 251 aa7.77□□□□□ -1.17
COL12A1-206ENST00000474564 SDF2L1Q9HCN8 221 aa7.77□□□□□ -1.17
COL12A1-206ENST00000474564 BIN3Q9NQY0 253 aa7.77□□□□□ -1.17
COL12A1-206ENST00000474564 SMCO4Q9NRQ5 59 aa7.77□□□□□ -1.17
COL12A1-206ENST00000474564 ZNF256Q9Y2P7 627 aaPredicted RBP7.77□□□□□ -1.17
COL12A1-206ENST00000474564 ANK3Q12955 4377 aaKnown RBP7.77□□□□□ -1.17
COL12A1-206ENST00000474564 TEP1Q99973 2627 aaKnown RBP7.76□□□□□ -1.17
COL12A1-206ENST00000474564 PPP1R2P9O14990 202 aa7.76□□□□□ -1.17
COL12A1-206ENST00000474564 S100PP25815 95 aa7.76□□□□□ -1.17
COL12A1-206ENST00000474564 TAS2R60P59551 318 aa7.76□□□□□ -1.17
COL12A1-206ENST00000474564 DEFB131AP59861 70 aa7.76□□□□□ -1.17
COL12A1-206ENST00000474564 NUTF2P61970 127 aaKnown RBP7.76□□□□□ -1.17
COL12A1-206ENST00000474564 IGFL4Q6B9Z1 124 aa7.76□□□□□ -1.17
COL12A1-206ENST00000474564 ATRAIDQ6UW56 229 aa7.76□□□□□ -1.17
COL12A1-206ENST00000474564 FOXI2Q6ZQN5 318 aa7.76□□□□□ -1.17
COL12A1-206ENST00000474564 C15orf54Q8N8G6 183 aa7.76□□□□□ -1.17
COL12A1-206ENST00000474564 NIPBLQ6KC79 2804 aaeCLIP7.75□□□□□ -1.17
COL12A1-206ENST00000474564 TRAV8-2A0A0B4J237 113 aa7.75□□□□□ -1.17
COL12A1-206ENST00000474564 C9JCJ5 164 aa7.75□□□□□ -1.17
COL12A1-206ENST00000474564 H7BYZ3 331 aa7.75□□□□□ -1.17
COL12A1-206ENST00000474564 M0R3E3 92 aa7.75□□□□□ -1.17
COL12A1-206ENST00000474564 SOCS3O14543 225 aa7.75□□□□□ -1.17
COL12A1-206ENST00000474564 TSPOP30536 169 aa7.75□□□□□ -1.17
COL12A1-206ENST00000474564 RPL23P62829 140 aaKnown RBP7.75□□□□□ -1.17
COL12A1-206ENST00000474564 FLI1Q01543 452 aaPredicted RBP7.75□□□□□ -1.17
COL12A1-206ENST00000474564 HIST1H1AQ02539 215 aaPredicted RBP7.75□□□□□ -1.17
COL12A1-206ENST00000474564 TMEM88Q6PEY1 159 aa7.75□□□□□ -1.17
COL12A1-206ENST00000474564 BAGE2Q86Y30 109 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms