RNA–Protein interactions for RNA: ENST00000474157.1

GPNMB-209, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 513 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-209ENST00000474157 IGKV1D-33P01593 117 aa5.76□□□□□ -1.49
GPNMB-209ENST00000474157 IGKV1-33P01594 117 aa5.76□□□□□ -1.49
GPNMB-209ENST00000474157 P04436 131 aa5.76□□□□□ -1.49
GPNMB-209ENST00000474157 GCHFRP30047 84 aa5.76□□□□□ -1.49
GPNMB-209ENST00000474157 UBE2D3P61077 147 aa5.76□□□□□ -1.49
GPNMB-209ENST00000474157 UBE2D2P62837 147 aa5.76□□□□□ -1.49
GPNMB-209ENST00000474157 CD164Q04900 197 aa5.76□□□□□ -1.49
GPNMB-209ENST00000474157 NUMA1Q14980 2115 aa5.76□□□□□ -1.49
GPNMB-209ENST00000474157 TMEM170BQ5T4T1 132 aa5.76□□□□□ -1.49
GPNMB-209ENST00000474157 MFSD12Q6NUT3 480 aa5.76□□□□□ -1.49
GPNMB-209ENST00000474157 HRCT1Q6UXD1 115 aa5.76□□□□□ -1.49
GPNMB-209ENST00000474157 DGAT2L6Q6ZPD8 337 aa5.76□□□□□ -1.49
GPNMB-209ENST00000474157 RPS19BP1Q86WX3 136 aaKnown RBP5.76□□□□□ -1.49
GPNMB-209ENST00000474157 ABHD12Q8N2K0 398 aa5.76□□□□□ -1.49
GPNMB-209ENST00000474157 WFDC5Q8TCV5 224 aa5.76□□□□□ -1.49
GPNMB-209ENST00000474157 MRPL20Q9BYC9 149 aaKnown RBP5.76□□□□□ -1.49
GPNMB-209ENST00000474157 SLC25A22Q9H936 323 aa5.76□□□□□ -1.49
GPNMB-209ENST00000474157 TMEM167BQ9NRX6 74 aa5.76□□□□□ -1.49
GPNMB-209ENST00000474157 DEC1Q9P2X7 70 aa5.76□□□□□ -1.49
GPNMB-209ENST00000474157 PILRAQ9UKJ1 303 aa5.76□□□□□ -1.49
GPNMB-209ENST00000474157 PLXNA2O75051 1894 aa5.76□□□□□ -1.49
GPNMB-209ENST00000474157 POLQO75417 2590 aa5.76□□□□□ -1.49
GPNMB-209ENST00000474157 TRAV13-1A0A0B4J241 112 aa5.75□□□□□ -1.49
GPNMB-209ENST00000474157 A0A1B0GTH9 108 aa5.75□□□□□ -1.49
GPNMB-209ENST00000474157 P0DMU3 169 aa5.75□□□□□ -1.49
GPNMB-209ENST00000474157 FAM231AP0DMU4 169 aa5.75□□□□□ -1.49
GPNMB-209ENST00000474157 FAM231CP0DMU5 169 aa5.75□□□□□ -1.49
GPNMB-209ENST00000474157 LOXP28300 417 aaPredicted RBP5.75□□□□□ -1.49
GPNMB-209ENST00000474157 HOXD9P28356 352 aaPredicted RBP5.75□□□□□ -1.49
GPNMB-209ENST00000474157 MFAP2P55001 183 aa5.75□□□□□ -1.49
GPNMB-209ENST00000474157 FOXA3P55318 350 aaPredicted RBP5.75□□□□□ -1.49
GPNMB-209ENST00000474157 HBBP68871 147 aa5.75□□□□□ -1.49
GPNMB-209ENST00000474157 SUMO4Q6EEV6 95 aa5.75□□□□□ -1.49
GPNMB-209ENST00000474157 BMFQ96LC9 184 aa5.75□□□□□ -1.49
GPNMB-209ENST00000474157 AGPAT4-IT1Q9H0P7 198 aa5.75□□□□□ -1.49
GPNMB-209ENST00000474157 RNASE7Q9H1E1 156 aaKnown RBP5.75□□□□□ -1.49
GPNMB-209ENST00000474157 C19orf25Q9UFG5 118 aaPredicted RBP5.75□□□□□ -1.49
GPNMB-209ENST00000474157 ZNF256Q9Y2P7 627 aaPredicted RBP5.75□□□□□ -1.49
GPNMB-209ENST00000474157 KLF13Q9Y2Y9 288 aaPredicted RBP5.75□□□□□ -1.49
GPNMB-209ENST00000474157 PYGO1Q9Y3Y4 419 aa5.75□□□□□ -1.49
GPNMB-209ENST00000474157 LHFPL6Q9Y693 200 aa5.75□□□□□ -1.49
GPNMB-209ENST00000474157 ADAMTS9Q9P2N4 1935 aa5.74□□□□□ -1.49
GPNMB-209ENST00000474157 OOSP1A8MZH6 123 aa5.74□□□□□ -1.49
GPNMB-209ENST00000474157 CD7P09564 240 aa5.74□□□□□ -1.49
GPNMB-209ENST00000474157 RFPL3SP0C7P2 107 aa5.74□□□□□ -1.49
GPNMB-209ENST00000474157 PYYP10082 97 aa5.74□□□□□ -1.49
GPNMB-209ENST00000474157 PFN2P35080 140 aa5.74□□□□□ -1.49
GPNMB-209ENST00000474157 MRPS36P82909 103 aaKnown RBP5.74□□□□□ -1.49
GPNMB-209ENST00000474157 DEFB121Q5J5C9 76 aa5.74□□□□□ -1.49
GPNMB-209ENST00000474157 AAED1Q7RTV5 226 aa5.74□□□□□ -1.49
GPNMB-209ENST00000474157 TBC1D26Q86UD7 250 aa5.74□□□□□ -1.49
GPNMB-209ENST00000474157 POM121L12Q8N7R1 296 aa5.74□□□□□ -1.49
GPNMB-209ENST00000474157 IFI27L1Q96BM0 104 aa5.74□□□□□ -1.49
GPNMB-209ENST00000474157 ZNF488Q96MN9 340 aa5.74□□□□□ -1.49
GPNMB-209ENST00000474157 HDHD3Q9BSH5 251 aaPredicted RBP5.74□□□□□ -1.49
GPNMB-209ENST00000474157 FGF22Q9HCT0 170 aa5.74□□□□□ -1.49
GPNMB-209ENST00000474157 FAM60AQ9NP50 221 aa5.74□□□□□ -1.49
GPNMB-209ENST00000474157 CACNG5Q9UF02 275 aa5.74□□□□□ -1.49
GPNMB-209ENST00000474157 TRBV25-1A0A075B6N4 114 aa5.73□□□□□ -1.49
GPNMB-209ENST00000474157 TRAV12-2A0A075B6T6 113 aa5.73□□□□□ -1.49
GPNMB-209ENST00000474157 EPM2AB3EWF7 344 aa5.73□□□□□ -1.49
GPNMB-209ENST00000474157 J3QQQ9 107 aa5.73□□□□□ -1.49
GPNMB-209ENST00000474157 TIMM23O14925 209 aa5.73□□□□□ -1.49
GPNMB-209ENST00000474157 IGLV3-27P01718 113 aa5.73□□□□□ -1.49
GPNMB-209ENST00000474157 IGKCP01834 107 aa5.73□□□□□ -1.49
GPNMB-209ENST00000474157 ZNF823P16415 610 aa5.73□□□□□ -1.49
GPNMB-209ENST00000474157 CCL1P22362 96 aa5.73□□□□□ -1.49
GPNMB-209ENST00000474157 COL8A2P25067 703 aa5.73□□□□□ -1.49
GPNMB-209ENST00000474157 SSR2P43308 183 aa5.73□□□□□ -1.49
GPNMB-209ENST00000474157 LOXL1Q08397 574 aaPredicted RBP5.73□□□□□ -1.49
GPNMB-209ENST00000474157 FGFRL1Q8N441 504 aa5.73□□□□□ -1.49
GPNMB-209ENST00000474157 SAP25Q8TEE9 199 aa5.73□□□□□ -1.49
GPNMB-209ENST00000474157 C18orf15Q96N68 181 aa5.73□□□□□ -1.49
GPNMB-209ENST00000474157 ODF3Q96PU9 254 aa5.73□□□□□ -1.49
GPNMB-209ENST00000474157 CHCHD5Q9BSY4 110 aa5.73□□□□□ -1.49
GPNMB-209ENST00000474157 NPCDR1Q9BY65 106 aa5.73□□□□□ -1.49
GPNMB-209ENST00000474157 TNRC6BQ9UPQ9 1833 aaKnown RBP5.73□□□□□ -1.49
GPNMB-209ENST00000474157 FBN3Q75N90 2809 aa5.73□□□□□ -1.49
GPNMB-209ENST00000474157 BOD1L1Q8NFC6 3051 aa5.73□□□□□ -1.49
GPNMB-209ENST00000474157 SPTBN1Q01082 2364 aaKnown RBP5.72□□□□□ -1.49
GPNMB-209ENST00000474157 IGHV3OR15-7A0A075B7D8 119 aa5.72□□□□□ -1.49
GPNMB-209ENST00000474157 TRAV17A0A0B4J275 112 aa5.72□□□□□ -1.49
GPNMB-209ENST00000474157 UBE2L5PA0A1B0GUS4 154 aa5.72□□□□□ -1.49
GPNMB-209ENST00000474157 LY6LH3BQJ8 138 aa5.72□□□□□ -1.49
GPNMB-209ENST00000474157 H7C1H1 209 aa5.72□□□□□ -1.49
GPNMB-209ENST00000474157 LGALS9O00182 355 aa5.72□□□□□ -1.49
GPNMB-209ENST00000474157 PLAUP00749 431 aa5.72□□□□□ -1.49
GPNMB-209ENST00000474157 IGLV3-19P01714 112 aa5.72□□□□□ -1.49
GPNMB-209ENST00000474157 COX6A1P12074 109 aa5.72□□□□□ -1.49
GPNMB-209ENST00000474157 PSMB2P49721 201 aa5.72□□□□□ -1.49
GPNMB-209ENST00000474157 CENPWQ5EE01 88 aa5.72□□□□□ -1.49
GPNMB-209ENST00000474157 ASPHD1Q5U4P2 390 aa5.72□□□□□ -1.49
GPNMB-209ENST00000474157 HMGN2P46Q86SG4 172 aa5.72□□□□□ -1.49
GPNMB-209ENST00000474157 LINC00643Q86TS7 51 aa5.72□□□□□ -1.49
GPNMB-209ENST00000474157 GATAD1Q8WUU5 269 aa5.72□□□□□ -1.49
GPNMB-209ENST00000474157 ZNF414Q96IQ9 312 aa5.72□□□□□ -1.49
GPNMB-209ENST00000474157 OCIAD1Q9NX40 245 aa5.72□□□□□ -1.49
GPNMB-209ENST00000474157 WDR83OSQ9Y284 106 aa5.72□□□□□ -1.49
GPNMB-209ENST00000474157 SETD2Q9BYW2 2564 aaPredicted RBP5.72□□□□□ -1.49
GPNMB-209ENST00000474157 NBPF19A0A087WUL8 3843 aa5.71□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms