RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 FAM206AQ9NX38 181 aa2.57□□□□□ -2
BRCA1-212ENST00000473961 TRAPPC2LQ9UL33 140 aa2.57□□□□□ -2
BRCA1-212ENST00000473961 HHLA2Q9UM44 414 aa2.57□□□□□ -2
BRCA1-212ENST00000473961 POLR1DQ9Y2S0 133 aa2.57□□□□□ -2
BRCA1-212ENST00000473961 KLF13Q9Y2Y9 288 aaPredicted RBP2.57□□□□□ -2
BRCA1-212ENST00000473961 WASHC3Q9Y3C0 194 aa2.57□□□□□ -2
BRCA1-212ENST00000473961 S4R3C0 116 aa2.57□□□□□ -2
BRCA1-212ENST00000473961 TICRRQ7Z2Z1 1910 aa2.57□□□□□ -2
BRCA1-212ENST00000473961 NUP210Q8TEM1 1887 aaPredicted RBP2.56□□□□□ -2
BRCA1-212ENST00000473961 PLXND1Q9Y4D7 1925 aa2.56□□□□□ -2
BRCA1-212ENST00000473961 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.56□□□□□ -2
BRCA1-212ENST00000473961 TRAV38-1A0A0B4J264 116 aa2.56□□□□□ -2
BRCA1-212ENST00000473961 FAM24AA6NFZ4 105 aa2.56□□□□□ -2
BRCA1-212ENST00000473961 TMEM14DPA8MWL7 114 aa2.56□□□□□ -2
BRCA1-212ENST00000473961 DEGS1O15121 323 aa2.56□□□□□ -2
BRCA1-212ENST00000473961 LHBP01229 141 aa2.56□□□□□ -2
BRCA1-212ENST00000473961 IGHV1-46P01743 117 aa2.56□□□□□ -2
BRCA1-212ENST00000473961 TTRP02766 147 aa2.56□□□□□ -2
BRCA1-212ENST00000473961 C3orf79P0CE67 100 aa2.56□□□□□ -2
BRCA1-212ENST00000473961 ZNF728P0DKX0 622 aa2.56□□□□□ -2
BRCA1-212ENST00000473961 HIST1H1DP16402 221 aaKnown RBP2.56□□□□□ -2
BRCA1-212ENST00000473961 HMGA1P17096 107 aaKnown RBP2.56□□□□□ -2
BRCA1-212ENST00000473961 NTF3P20783 257 aa2.56□□□□□ -2
BRCA1-212ENST00000473961 GRPRP30550 384 aa2.56□□□□□ -2
BRCA1-212ENST00000473961 DYNLT3P51808 116 aa2.56□□□□□ -2
BRCA1-212ENST00000473961 HIST1H1AQ02539 215 aaPredicted RBP2.56□□□□□ -2
BRCA1-212ENST00000473961 PRDX1Q06830 199 aaKnown RBP2.56□□□□□ -2
BRCA1-212ENST00000473961 AESQ08117 197 aa2.56□□□□□ -2
BRCA1-212ENST00000473961 SP6Q3SY56 376 aa2.56□□□□□ -2
BRCA1-212ENST00000473961 FAM162BQ5T6X4 162 aa2.56□□□□□ -2
BRCA1-212ENST00000473961 C1orf140Q5VVS0 124 aa2.56□□□□□ -2
BRCA1-212ENST00000473961 SLC25A34Q6PIV7 304 aa2.56□□□□□ -2
BRCA1-212ENST00000473961 DGAT2L6Q6ZPD8 337 aa2.56□□□□□ -2
BRCA1-212ENST00000473961 FOXI2Q6ZQN5 318 aa2.56□□□□□ -2
BRCA1-212ENST00000473961 OLIG3Q7RTU3 272 aa2.56□□□□□ -2
BRCA1-212ENST00000473961 HMGN2P46Q86SG4 172 aa2.56□□□□□ -2
BRCA1-212ENST00000473961 DOLPP1Q86YN1 238 aa2.56□□□□□ -2
BRCA1-212ENST00000473961 MIR7-3HGQ8N6C7 128 aa2.56□□□□□ -2
BRCA1-212ENST00000473961 ST20-AS1Q8NBB2 130 aa2.56□□□□□ -2
BRCA1-212ENST00000473961 TSTD1Q8NFU3 115 aa2.56□□□□□ -2
BRCA1-212ENST00000473961 OR5C1Q8NGR4 320 aa2.56□□□□□ -2
BRCA1-212ENST00000473961 OR2K2Q8NGT1 345 aa2.56□□□□□ -2
BRCA1-212ENST00000473961 SGMS2Q8NHU3 365 aa2.56□□□□□ -2
BRCA1-212ENST00000473961 VSTM2AQ8TAG5 236 aa2.56□□□□□ -2
BRCA1-212ENST00000473961 ZNF418Q8TF45 676 aaPredicted RBP2.56□□□□□ -2
BRCA1-212ENST00000473961 OR5P3Q8WZ94 311 aa2.56□□□□□ -2
BRCA1-212ENST00000473961 FMC1Q96HJ9 113 aa2.56□□□□□ -2
BRCA1-212ENST00000473961 NMNAT3Q96T66 252 aa2.56□□□□□ -2
BRCA1-212ENST00000473961 SDF2Q99470 211 aa2.56□□□□□ -2
BRCA1-212ENST00000473961 TXNDC17Q9BRA2 123 aa2.56□□□□□ -2
BRCA1-212ENST00000473961 FAM103A1Q9BTL3 118 aaKnown RBP2.56□□□□□ -2
BRCA1-212ENST00000473961 ULBP3Q9BZM4 244 aa2.56□□□□□ -2
BRCA1-212ENST00000473961 COMMD5Q9GZQ3 224 aa2.56□□□□□ -2
BRCA1-212ENST00000473961 WDR61Q9GZS3 305 aaKnown RBP2.56□□□□□ -2
BRCA1-212ENST00000473961 MS4A6AQ9H2W1 248 aa2.56□□□□□ -2
BRCA1-212ENST00000473961 NAA60Q9H7X0 242 aa2.56□□□□□ -2
BRCA1-212ENST00000473961 NPVFQ9HCQ7 196 aa2.56□□□□□ -2
BRCA1-212ENST00000473961 SLC39A9Q9NUM3 307 aa2.56□□□□□ -2
BRCA1-212ENST00000473961 TAS2R4Q9NYW5 299 aa2.56□□□□□ -2
BRCA1-212ENST00000473961 PTPRDP23468 1912 aa2.56□□□□□ -2
BRCA1-212ENST00000473961 DENND4CQ5VZ89 1909 aa2.56□□□□□ -2
BRCA1-212ENST00000473961 DOCK8Q8NF50 2099 aa2.56□□□□□ -2
BRCA1-212ENST00000473961 IGLV2-18A0A075B6J9 118 aa2.55□□□□□ -2
BRCA1-212ENST00000473961 MUC21A0A0G2JKD1 596 aa2.55□□□□□ -2
BRCA1-212ENST00000473961 A0A0J9YY10 115 aa2.55□□□□□ -2
BRCA1-212ENST00000473961 MUC21A0A140T8X8 626 aa2.55□□□□□ -2
BRCA1-212ENST00000473961 MDFIC2A0A1B0GVS7 189 aa2.55□□□□□ -2
BRCA1-212ENST00000473961 A0A1B0GWA3 101 aa2.55□□□□□ -2
BRCA1-212ENST00000473961 A0A1B0GX78 115 aa2.55□□□□□ -2
BRCA1-212ENST00000473961 C7orf71A4D174 169 aa2.55□□□□□ -2
BRCA1-212ENST00000473961 GRIFINA4D1Z8 144 aa2.55□□□□□ -2
BRCA1-212ENST00000473961 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.55□□□□□ -2
BRCA1-212ENST00000473961 PLXNA2O75051 1894 aa2.55□□□□□ -2
BRCA1-212ENST00000473961 CA2P00918 260 aa2.55□□□□□ -2
BRCA1-212ENST00000473961 CD28P10747 220 aa2.55□□□□□ -2
BRCA1-212ENST00000473961 CRYBB3P26998 211 aa2.55□□□□□ -2
BRCA1-212ENST00000473961 ZNF83P51522 516 aa2.55□□□□□ -2
BRCA1-212ENST00000473961 CMC4P56277 68 aaPredicted RBP2.55□□□□□ -2
BRCA1-212ENST00000473961 SRSF6Q13247 344 aaKnown RBP2.55□□□□□ -2
BRCA1-212ENST00000473961 EIF3IQ13347 325 aaKnown RBP2.55□□□□□ -2
BRCA1-212ENST00000473961 IGFBP7Q16270 282 aa2.55□□□□□ -2
BRCA1-212ENST00000473961 CLEC12BQ2HXU8 276 aa2.55□□□□□ -2
BRCA1-212ENST00000473961 LCN15Q6UWW0 184 aa2.55□□□□□ -2
BRCA1-212ENST00000473961 LYZL2Q7Z4W2 148 aa2.55□□□□□ -2
BRCA1-212ENST00000473961 NLRC5Q86WI3 1866 aa2.55□□□□□ -2
BRCA1-212ENST00000473961 LINC00337Q8N6G1 96 aa2.55□□□□□ -2
BRCA1-212ENST00000473961 OR8B3Q8NGG8 313 aa2.55□□□□□ -2
BRCA1-212ENST00000473961 OR5D14Q8NGL3 314 aa2.55□□□□□ -2
BRCA1-212ENST00000473961 OTOSQ8NHW6 89 aa2.55□□□□□ -2
BRCA1-212ENST00000473961 PPTC7Q8NI37 304 aa2.55□□□□□ -2
BRCA1-212ENST00000473961 C18orf32Q8TCD1 76 aa2.55□□□□□ -2
BRCA1-212ENST00000473961 CCL17Q92583 94 aa2.55□□□□□ -2
BRCA1-212ENST00000473961 GALMQ96C23 342 aa2.55□□□□□ -2
BRCA1-212ENST00000473961 OR8B2Q96RD0 313 aa2.55□□□□□ -2
BRCA1-212ENST00000473961 GPER1Q99527 375 aa2.55□□□□□ -2
BRCA1-212ENST00000473961 ZNF286AQ9HBT8 521 aa2.55□□□□□ -2
BRCA1-212ENST00000473961 SPANXB1Q9NS25 103 aaPredicted RBP2.55□□□□□ -2
BRCA1-212ENST00000473961 RPRMQ9NS64 109 aa2.55□□□□□ -2
BRCA1-212ENST00000473961 IL36BQ9NZH7 164 aa2.55□□□□□ -2
BRCA1-212ENST00000473961 ERG28Q9UKR5 140 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms