RNA–Protein interactions for RNA: ENST00000473711.1

SP140-208, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 644 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-208ENST00000473711 PEMTQ9UBM1 199 aa8.14□□□□□ -1.11
SP140-208ENST00000473711 CUBNO60494 3623 aa8.14□□□□□ -1.11
SP140-208ENST00000473711 HELTA6NFD8 242 aa8.13□□□□□ -1.11
SP140-208ENST00000473711 M0QZ24 198 aa8.13□□□□□ -1.11
SP140-208ENST00000473711 PEX7O00628 323 aa8.13□□□□□ -1.11
SP140-208ENST00000473711 SNAPINO95295 136 aa8.13□□□□□ -1.11
SP140-208ENST00000473711 CSN3P07498 182 aa8.13□□□□□ -1.11
SP140-208ENST00000473711 AKR1C3P42330 323 aa8.13□□□□□ -1.11
SP140-208ENST00000473711 FHL3Q13643 280 aa8.13□□□□□ -1.11
SP140-208ENST00000473711 TMEM241Q24JQ0 296 aa8.13□□□□□ -1.11
SP140-208ENST00000473711 FAM74A3Q4VXF1 159 aa8.13□□□□□ -1.11
SP140-208ENST00000473711 AWAT1Q58HT5 328 aa8.13□□□□□ -1.11
SP140-208ENST00000473711 ADAMTSL5Q6ZMM2 481 aa8.13□□□□□ -1.11
SP140-208ENST00000473711 LINC00518Q8N0U6 118 aa8.13□□□□□ -1.11
SP140-208ENST00000473711 C5orf17Q8NAS9 161 aa8.13□□□□□ -1.11
SP140-208ENST00000473711 LINC00479Q96M42 142 aa8.13□□□□□ -1.11
SP140-208ENST00000473711 NIPSNAP3BQ9BS92 247 aa8.13□□□□□ -1.11
SP140-208ENST00000473711 ZNF331Q9NQX6 463 aaPredicted RBP8.13□□□□□ -1.11
SP140-208ENST00000473711 TRAV8-2A0A0B4J237 113 aa8.12□□□□□ -1.11
SP140-208ENST00000473711 TRAV34A0A0B4J273 112 aa8.12□□□□□ -1.11
SP140-208ENST00000473711 M0R036 132 aa8.12□□□□□ -1.11
SP140-208ENST00000473711 M0R3E3 92 aa8.12□□□□□ -1.11
SP140-208ENST00000473711 ZNF253O75346 499 aa8.12□□□□□ -1.11
SP140-208ENST00000473711 TCRAP04437 139 aa8.12□□□□□ -1.11
SP140-208ENST00000473711 RPL35P42766 123 aaKnown RBP8.12□□□□□ -1.11
SP140-208ENST00000473711 MEOX2P50222 304 aa8.12□□□□□ -1.11
SP140-208ENST00000473711 KRTAP24-1Q3LI83 254 aa8.12□□□□□ -1.11
SP140-208ENST00000473711 PRIMA1Q86XR5 153 aa8.12□□□□□ -1.11
SP140-208ENST00000473711 WFDC3Q8IUB2 231 aa8.12□□□□□ -1.11
SP140-208ENST00000473711 GBGT1Q8N5D6 347 aa8.12□□□□□ -1.11
SP140-208ENST00000473711 RNF182Q8N6D2 247 aa8.12□□□□□ -1.11
SP140-208ENST00000473711 C2CD4CQ8TF44 421 aa8.12□□□□□ -1.11
SP140-208ENST00000473711 HIST1H2BAQ96A08 127 aa8.12□□□□□ -1.11
SP140-208ENST00000473711 TVP23CQ96ET8 276 aa8.12□□□□□ -1.11
SP140-208ENST00000473711 C16orf92Q96LL3 132 aa8.12□□□□□ -1.11
SP140-208ENST00000473711 SGK494Q96LW2 274 aa8.12□□□□□ -1.11
SP140-208ENST00000473711 SLC50A1Q9BRV3 221 aa8.12□□□□□ -1.11
SP140-208ENST00000473711 MLXQ9UH92 298 aa8.12□□□□□ -1.11
SP140-208ENST00000473711 ZNF705FA8MVS1 300 aaPredicted RBP8.11□□□□□ -1.11
SP140-208ENST00000473711 DIRC3C9JPN6 131 aa8.11□□□□□ -1.11
SP140-208ENST00000473711 OVOL1O14753 267 aa8.11□□□□□ -1.11
SP140-208ENST00000473711 CSN1S1P47710 185 aa8.11□□□□□ -1.11
SP140-208ENST00000473711 CNN1P51911 297 aaKnown RBP8.11□□□□□ -1.11
SP140-208ENST00000473711 LCN12Q6JVE5 192 aa8.11□□□□□ -1.11
SP140-208ENST00000473711 GOLT1AQ6ZVE7 132 aa8.11□□□□□ -1.11
SP140-208ENST00000473711 TCEAL7Q9BRU2 100 aa8.11□□□□□ -1.11
SP140-208ENST00000473711 ATG101Q9BSB4 218 aa8.11□□□□□ -1.11
SP140-208ENST00000473711 SDF2L1Q9HCN8 221 aa8.11□□□□□ -1.11
SP140-208ENST00000473711 NRN1Q9NPD7 142 aa8.11□□□□□ -1.11
SP140-208ENST00000473711 AURKAIP1Q9NWT8 199 aaPredicted RBP8.11□□□□□ -1.11
SP140-208ENST00000473711 NAT8Q9UHE5 227 aa8.11□□□□□ -1.11
SP140-208ENST00000473711 PGPEP1LA6NFU8 196 aa8.1□□□□□ -1.11
SP140-208ENST00000473711 ISLRO14498 428 aa8.1□□□□□ -1.11
SP140-208ENST00000473711 TFPI2P48307 235 aa8.1□□□□□ -1.11
SP140-208ENST00000473711 OCC1Q8TAD7 63 aa8.1□□□□□ -1.11
SP140-208ENST00000473711 DYNLRB2Q8TF09 96 aa8.1□□□□□ -1.11
SP140-208ENST00000473711 C20orf173Q96LM9 149 aa8.1□□□□□ -1.11
SP140-208ENST00000473711 MS4A6AQ9H2W1 248 aa8.1□□□□□ -1.11
SP140-208ENST00000473711 SAV1Q9H4B6 383 aaPredicted RBP8.1□□□□□ -1.11
SP140-208ENST00000473711 BIN3Q9NQY0 253 aa8.1□□□□□ -1.11
SP140-208ENST00000473711 TRBV20OR9-2A0A075B6H5 130 aa8.09□□□□□ -1.11
SP140-208ENST00000473711 TRAV8-1A0A0A6YYK1 113 aa8.09□□□□□ -1.11
SP140-208ENST00000473711 PRAC2D3DTV9 90 aa8.09□□□□□ -1.11
SP140-208ENST00000473711 SOCS3O14543 225 aa8.09□□□□□ -1.11
SP140-208ENST00000473711 GNG4P50150 75 aa8.09□□□□□ -1.11
SP140-208ENST00000473711 TAS2R60P59551 318 aa8.09□□□□□ -1.11
SP140-208ENST00000473711 UBE2G1P62253 170 aa8.09□□□□□ -1.11
SP140-208ENST00000473711 RPL23P62829 140 aaKnown RBP8.09□□□□□ -1.11
SP140-208ENST00000473711 ADIRFQ15847 76 aa8.09□□□□□ -1.11
SP140-208ENST00000473711 PSG3Q16557 428 aa8.09□□□□□ -1.11
SP140-208ENST00000473711 TMEM183BQ1AE95 376 aa8.09□□□□□ -1.11
SP140-208ENST00000473711 DEFB114Q30KQ6 69 aa8.09□□□□□ -1.11
SP140-208ENST00000473711 CENPWQ5EE01 88 aa8.09□□□□□ -1.11
SP140-208ENST00000473711 BAGE2Q86Y30 109 aa8.09□□□□□ -1.11
SP140-208ENST00000473711 CITED1Q99966 193 aa8.09□□□□□ -1.11
SP140-208ENST00000473711 IGKV2-40A0A087WW87 121 aaPredicted RBP8.08□□□□□ -1.12
SP140-208ENST00000473711 C7orf77A4D0Y5 90 aa8.08□□□□□ -1.12
SP140-208ENST00000473711 C9JCJ5 164 aa8.08□□□□□ -1.12
SP140-208ENST00000473711 K7EQM0 130 aa8.08□□□□□ -1.12
SP140-208ENST00000473711 IGKV2D-40P01614 121 aaPredicted RBP8.08□□□□□ -1.12
SP140-208ENST00000473711 PF4P02776 101 aa8.08□□□□□ -1.12
SP140-208ENST00000473711 S100A9P06702 114 aaKnown RBP8.08□□□□□ -1.12
SP140-208ENST00000473711 ID1P41134 155 aa8.08□□□□□ -1.12
SP140-208ENST00000473711 S100A12P80511 92 aa8.08□□□□□ -1.12
SP140-208ENST00000473711 RBPMS2Q6ZRY4 209 aaKnown RBP8.08□□□□□ -1.12
SP140-208ENST00000473711 PRNTQ86SH4 94 aa8.08□□□□□ -1.12
SP140-208ENST00000473711 ARL6IP6Q8N6S5 226 aa8.08□□□□□ -1.12
SP140-208ENST00000473711 ZNF738Q8NE65 137 aa8.08□□□□□ -1.12
SP140-208ENST00000473711 FMC1Q96HJ9 113 aa8.08□□□□□ -1.12
SP140-208ENST00000473711 IGF2BP2-AS1Q96M15 143 aa8.08□□□□□ -1.12
SP140-208ENST00000473711 ASCL2Q99929 193 aa8.08□□□□□ -1.12
SP140-208ENST00000473711 KRTAP4-8Q9BYQ9 185 aa8.08□□□□□ -1.12
SP140-208ENST00000473711 RPS10P5Q9NQ39 176 aa8.08□□□□□ -1.12
SP140-208ENST00000473711 CLEC5AQ9NY25 188 aa8.08□□□□□ -1.12
SP140-208ENST00000473711 KLF12Q9Y4X4 402 aa8.08□□□□□ -1.12
SP140-208ENST00000473711 NSD1Q96L73 2696 aaPredicted RBP8.08□□□□□ -1.12
SP140-208ENST00000473711 K7EQG2 157 aa8.07□□□□□ -1.12
SP140-208ENST00000473711 IGLV2-11P01706 119 aa8.07□□□□□ -1.12
SP140-208ENST00000473711 PAFAH1B2P68402 229 aa8.07□□□□□ -1.12
SP140-208ENST00000473711 PNRC1Q12796 327 aaPredicted RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms