RNA–Protein interactions for RNA: ENST00000473417.5

SNX4-204, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-204ENST00000473417 NDUFB4O95168 129 aa13.09□□□□□ -0.31
SNX4-204ENST00000473417 LY6G6CO95867 125 aa13.09□□□□□ -0.31
SNX4-204ENST00000473417 HIST1H1AQ02539 215 aaPredicted RBP13.09□□□□□ -0.31
SNX4-204ENST00000473417 FAM122CQ6P4D5 195 aa13.09□□□□□ -0.31
SNX4-204ENST00000473417 OR8A1Q8NGG7 326 aa13.09□□□□□ -0.31
SNX4-204ENST00000473417 OR10G4Q8NGN3 311 aa13.09□□□□□ -0.31
SNX4-204ENST00000473417 OR10G9Q8NGN4 311 aa13.09□□□□□ -0.31
SNX4-204ENST00000473417 OR10G7Q8NGN6 311 aa13.09□□□□□ -0.31
SNX4-204ENST00000473417 PHLDA1Q8WV24 401 aaPredicted RBP13.09□□□□□ -0.31
SNX4-204ENST00000473417 RNF141Q8WVD5 230 aa13.09□□□□□ -0.31
SNX4-204ENST00000473417 C1QTNF4Q9BXJ3 329 aa13.09□□□□□ -0.31
SNX4-204ENST00000473417 PRAC2D3DTV9 90 aa13.08□□□□□ -0.32
SNX4-204ENST00000473417 TAAR5O14804 337 aa13.08□□□□□ -0.32
SNX4-204ENST00000473417 ZNF253O75346 499 aa13.08□□□□□ -0.32
SNX4-204ENST00000473417 NBEAP1P0C6P0 100 aa13.08□□□□□ -0.32
SNX4-204ENST00000473417 TAS2R45P59539 299 aa13.08□□□□□ -0.32
SNX4-204ENST00000473417 CSNK1G2-AS1Q8NCQ2 148 aa13.08□□□□□ -0.32
SNX4-204ENST00000473417 OR2G3Q8NGZ4 309 aa13.08□□□□□ -0.32
SNX4-204ENST00000473417 FXYD5Q96DB9 178 aa13.08□□□□□ -0.32
SNX4-204ENST00000473417 ZNF503Q96F45 646 aa13.08□□□□□ -0.32
SNX4-204ENST00000473417 ST6GAL2Q96JF0 529 aa13.08□□□□□ -0.32
SNX4-204ENST00000473417 KMT2AQ03164 3969 aa13.07□□□□□ -0.32
SNX4-204ENST00000473417 HMSDA8MTL9 139 aa13.07□□□□□ -0.32
SNX4-204ENST00000473417 PDE6HQ13956 83 aa13.07□□□□□ -0.32
SNX4-204ENST00000473417 KHDC3LQ587J8 217 aa13.07□□□□□ -0.32
SNX4-204ENST00000473417 AMTNQ6UX39 209 aa13.07□□□□□ -0.32
SNX4-204ENST00000473417 EXOC3-AS1Q8N2X6 119 aa13.07□□□□□ -0.32
SNX4-204ENST00000473417 KCNRGQ8N5I3 272 aa13.07□□□□□ -0.32
SNX4-204ENST00000473417 GNPNAT1Q96EK6 184 aaPredicted RBP13.07□□□□□ -0.32
SNX4-204ENST00000473417 CYTL1Q9NRR1 136 aa13.07□□□□□ -0.32
SNX4-204ENST00000473417 A8MTW9 85 aa13.06□□□□□ -0.32
SNX4-204ENST00000473417 M0R3E3 92 aa13.06□□□□□ -0.32
SNX4-204ENST00000473417 HMGB3O15347 200 aaKnown RBP13.06□□□□□ -0.32
SNX4-204ENST00000473417 UBE2L3P68036 154 aaKnown RBP13.06□□□□□ -0.32
SNX4-204ENST00000473417 SERF2P84101 59 aa13.06□□□□□ -0.32
SNX4-204ENST00000473417 ZNF345Q14585 488 aa13.06□□□□□ -0.32
SNX4-204ENST00000473417 Q8NAQ8 132 aa13.06□□□□□ -0.32
SNX4-204ENST00000473417 C11orf45Q8TAV5 145 aa13.06□□□□□ -0.32
SNX4-204ENST00000473417 ARPC5LQ9BPX5 153 aa13.06□□□□□ -0.32
SNX4-204ENST00000473417 FRAS1Q86XX4 4008 aa13.05□□□□□ -0.32
SNX4-204ENST00000473417 MBP02144 154 aa13.05□□□□□ -0.32
SNX4-204ENST00000473417 CDC34P49427 236 aaPredicted RBP13.05□□□□□ -0.32
SNX4-204ENST00000473417 NANOS2P60321 138 aaKnown RBP13.05□□□□□ -0.32
SNX4-204ENST00000473417 ICAM4Q14773 271 aa13.05□□□□□ -0.32
SNX4-204ENST00000473417 SPINK13Q1W4C9 94 aa13.05□□□□□ -0.32
SNX4-204ENST00000473417 RPP25LQ8N5L8 163 aaKnown RBP13.05□□□□□ -0.32
SNX4-204ENST00000473417 PHYHIPLQ96FC7 376 aa13.05□□□□□ -0.32
SNX4-204ENST00000473417 AAMDCQ9H7C9 122 aa13.05□□□□□ -0.32
SNX4-204ENST00000473417 PPP1R14DQ9NXH3 145 aa13.05□□□□□ -0.32
SNX4-204ENST00000473417 M0R2Z0 102 aa13.04□□□□□ -0.32
SNX4-204ENST00000473417 DEFB4AO15263 64 aa13.04□□□□□ -0.32
SNX4-204ENST00000473417 OR10J6PQ8NGY7 276 aa13.04□□□□□ -0.32
SNX4-204ENST00000473417 X6R8D5 127 aa13.04□□□□□ -0.32
SNX4-204ENST00000473417 IGHV3OR16-12A0A075B7B8 117 aa13.03□□□□□ -0.32
SNX4-204ENST00000473417 A0A0D9SG52 128 aa13.03□□□□□ -0.32
SNX4-204ENST00000473417 ZNF705EA8MWA4 302 aaPredicted RBP13.03□□□□□ -0.32
SNX4-204ENST00000473417 RANP62826 216 aaKnown RBP13.03□□□□□ -0.32
SNX4-204ENST00000473417 TCTE3Q8IZS6 198 aa13.03□□□□□ -0.32
SNX4-204ENST00000473417 RAB24Q969Q5 203 aa13.03□□□□□ -0.32
SNX4-204ENST00000473417 MRPL53Q96EL3 112 aaKnown RBP13.03□□□□□ -0.32
SNX4-204ENST00000473417 PRELID1Q9Y255 219 aa13.03□□□□□ -0.32
SNX4-204ENST00000473417 IGHV4-28A0A0C4DH34 117 aa13.02□□□□□ -0.33
SNX4-204ENST00000473417 KANTRA0A1W2PQU2 76 aa13.02□□□□□ -0.33
SNX4-204ENST00000473417 BOLA2-SMG1P6H3BVE0 249 aa13.02□□□□□ -0.33
SNX4-204ENST00000473417 PQLC2Q6ZP29 291 aa13.02□□□□□ -0.33
SNX4-204ENST00000473417 ACTR3CQ9C0K3 210 aaPredicted RBP13.02□□□□□ -0.33
SNX4-204ENST00000473417 VPS13DQ5THJ4 4388 aa13.02□□□□□ -0.33
SNX4-204ENST00000473417 TRAV12-2A0A075B6T6 113 aa13.01□□□□□ -0.33
SNX4-204ENST00000473417 BCL2L11O43521 198 aa13.01□□□□□ -0.33
SNX4-204ENST00000473417 STAG3L2P0CL84 134 aa13.01□□□□□ -0.33
SNX4-204ENST00000473417 STAG3L3P0CL85 134 aa13.01□□□□□ -0.33
SNX4-204ENST00000473417 RBMY1A1P0DJD3 496 aaKnown RBP13.01□□□□□ -0.33
SNX4-204ENST00000473417 RBMY1CP0DJD4 496 aa13.01□□□□□ -0.33
SNX4-204ENST00000473417 ARL14EPLP0DKL9 152 aa13.01□□□□□ -0.33
SNX4-204ENST00000473417 MIFP14174 115 aa13.01□□□□□ -0.33
SNX4-204ENST00000473417 RBMY1FQ15415 496 aaKnown RBP13.01□□□□□ -0.33
SNX4-204ENST00000473417 ZNF705AQ6ZN79 300 aaPredicted RBP13.01□□□□□ -0.33
SNX4-204ENST00000473417 C1orf158Q8N1D5 194 aa13.01□□□□□ -0.33
SNX4-204ENST00000473417 IGF2BP2-AS1Q96M15 143 aa13.01□□□□□ -0.33
SNX4-204ENST00000473417 ZNF471Q9BX82 626 aaPredicted RBP13.01□□□□□ -0.33
SNX4-204ENST00000473417 Q9H3A6 140 aa13.01□□□□□ -0.33
SNX4-204ENST00000473417 A0A1B0GVG6 124 aa13□□□□□ -0.33
SNX4-204ENST00000473417 CRXO43186 299 aaPredicted RBP13□□□□□ -0.33
SNX4-204ENST00000473417 PFDN1O60925 122 aa13□□□□□ -0.33
SNX4-204ENST00000473417 AMBPP02760 352 aa13□□□□□ -0.33
SNX4-204ENST00000473417 ERCC8Q13216 396 aa13□□□□□ -0.33
SNX4-204ENST00000473417 AKR1C8PQ5T2L2 129 aa13□□□□□ -0.33
SNX4-204ENST00000473417 LGALS9CQ6DKI2 356 aa13□□□□□ -0.33
SNX4-204ENST00000473417 TMUB2Q71RG4 321 aa13□□□□□ -0.33
SNX4-204ENST00000473417 AKAP14Q86UN6 197 aa13□□□□□ -0.33
SNX4-204ENST00000473417 BAP18Q8IXM2 172 aa13□□□□□ -0.33
SNX4-204ENST00000473417 GOLT1BQ9Y3E0 138 aa13□□□□□ -0.33
SNX4-204ENST00000473417 NPIPB6E9PJ23 425 aa12.99□□□□□ -0.33
SNX4-204ENST00000473417 CT45A10P0DMU9 189 aa12.99□□□□□ -0.33
SNX4-204ENST00000473417 SSX7Q7RTT5 188 aa12.99□□□□□ -0.33
SNX4-204ENST00000473417 LYPD1Q8N2G4 141 aa12.99□□□□□ -0.33
SNX4-204ENST00000473417 IGKV2-40A0A087WW87 121 aaPredicted RBP12.98□□□□□ -0.33
SNX4-204ENST00000473417 INSP01308 110 aa12.98□□□□□ -0.33
SNX4-204ENST00000473417 IGKV2D-40P01614 121 aaPredicted RBP12.98□□□□□ -0.33
SNX4-204ENST00000473417 C1QBP02746 253 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms