RNA–Protein interactions for RNA: ENST00000472490.1

BRCA1-211, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-211ENST00000472490 KCNRGQ8N5I3 272 aa10.34□□□□□ -0.75
BRCA1-211ENST00000472490 FXYD5Q96DB9 178 aa10.34□□□□□ -0.75
BRCA1-211ENST00000472490 SLC35B3Q9H1N7 401 aa10.34□□□□□ -0.75
BRCA1-211ENST00000472490 C11orf68Q9H3H3 251 aaKnown RBP10.34□□□□□ -0.75
BRCA1-211ENST00000472490 GOLT1BQ9Y3E0 138 aa10.34□□□□□ -0.75
BRCA1-211ENST00000472490 DNAH9Q9NYC9 4486 aa10.33□□□□□ -0.76
BRCA1-211ENST00000472490 KANTRA0A1W2PQU2 76 aa10.33□□□□□ -0.76
BRCA1-211ENST00000472490 SMIM9A6NGZ8 99 aa10.33□□□□□ -0.76
BRCA1-211ENST00000472490 ZNF705FA8MVS1 300 aaPredicted RBP10.33□□□□□ -0.76
BRCA1-211ENST00000472490 BOLA2-SMG1P6H3BVE0 249 aa10.33□□□□□ -0.76
BRCA1-211ENST00000472490 J3QL48 77 aa10.33□□□□□ -0.76
BRCA1-211ENST00000472490 NDUFB4O95168 129 aa10.33□□□□□ -0.76
BRCA1-211ENST00000472490 ZNF705DP0CH99 300 aaPredicted RBP10.33□□□□□ -0.76
BRCA1-211ENST00000472490 ZNF705BP0CI00 300 aaPredicted RBP10.33□□□□□ -0.76
BRCA1-211ENST00000472490 FXYD7P58549 80 aa10.33□□□□□ -0.76
BRCA1-211ENST00000472490 EIF5AP63241 154 aaKnown RBP10.33□□□□□ -0.76
BRCA1-211ENST00000472490 FAM74A1Q5RGS3 127 aa10.33□□□□□ -0.76
BRCA1-211ENST00000472490 AMTNQ6UX39 209 aa10.33□□□□□ -0.76
BRCA1-211ENST00000472490 TCTE3Q8IZS6 198 aa10.33□□□□□ -0.76
BRCA1-211ENST00000472490 IGF2BP2-AS1Q96M15 143 aa10.33□□□□□ -0.76
BRCA1-211ENST00000472490 ACTR3CQ9C0K3 210 aaPredicted RBP10.33□□□□□ -0.76
BRCA1-211ENST00000472490 SH3BGRL3Q9H299 93 aa10.33□□□□□ -0.76
BRCA1-211ENST00000472490 RFNGQ9Y644 331 aa10.33□□□□□ -0.76
BRCA1-211ENST00000472490 TSPOP30536 169 aa10.32□□□□□ -0.76
BRCA1-211ENST00000472490 CSN1S1P47710 185 aa10.32□□□□□ -0.76
BRCA1-211ENST00000472490 ICAM4Q14773 271 aa10.32□□□□□ -0.76
BRCA1-211ENST00000472490 AKR1C8PQ5T2L2 129 aa10.32□□□□□ -0.76
BRCA1-211ENST00000472490 RPP25LQ8N5L8 163 aaKnown RBP10.32□□□□□ -0.76
BRCA1-211ENST00000472490 OR11H4Q8NGC9 324 aa10.32□□□□□ -0.76
BRCA1-211ENST00000472490 NEU1Q99519 415 aa10.32□□□□□ -0.76
BRCA1-211ENST00000472490 TMEM208Q9BTX3 173 aa10.32□□□□□ -0.76
BRCA1-211ENST00000472490 COL7A1Q02388 2944 aa10.31□□□□□ -0.76
BRCA1-211ENST00000472490 PFDN1O60925 122 aa10.31□□□□□ -0.76
BRCA1-211ENST00000472490 INSP01308 110 aa10.31□□□□□ -0.76
BRCA1-211ENST00000472490 CDKN1BP46527 198 aa10.31□□□□□ -0.76
BRCA1-211ENST00000472490 RANP62826 216 aaKnown RBP10.31□□□□□ -0.76
BRCA1-211ENST00000472490 SPINK13Q1W4C9 94 aa10.31□□□□□ -0.76
BRCA1-211ENST00000472490 LCE2AQ5TA79 106 aaPredicted RBP10.31□□□□□ -0.76
BRCA1-211ENST00000472490 ZNF705AQ6ZN79 300 aaPredicted RBP10.31□□□□□ -0.76
BRCA1-211ENST00000472490 EXOC3-AS1Q8N2X6 119 aa10.31□□□□□ -0.76
BRCA1-211ENST00000472490 RXFP4Q8TDU9 374 aa10.31□□□□□ -0.76
BRCA1-211ENST00000472490 RAB24Q969Q5 203 aa10.31□□□□□ -0.76
BRCA1-211ENST00000472490 ZNF503Q96F45 646 aa10.31□□□□□ -0.76
BRCA1-211ENST00000472490 ST6GAL2Q96JF0 529 aa10.31□□□□□ -0.76
BRCA1-211ENST00000472490 CYTL1Q9NRR1 136 aa10.31□□□□□ -0.76
BRCA1-211ENST00000472490 IGHV3OR16-12A0A075B7B8 117 aa10.3□□□□□ -0.76
BRCA1-211ENST00000472490 TMEM189A5PLL7 270 aa10.3□□□□□ -0.76
BRCA1-211ENST00000472490 M0R2Z0 102 aa10.3□□□□□ -0.76
BRCA1-211ENST00000472490 M0R3E3 92 aa10.3□□□□□ -0.76
BRCA1-211ENST00000472490 BCL2L11O43521 198 aa10.3□□□□□ -0.76
BRCA1-211ENST00000472490 CXorf1O96002 111 aa10.3□□□□□ -0.76
BRCA1-211ENST00000472490 STAG3L2P0CL84 134 aa10.3□□□□□ -0.76
BRCA1-211ENST00000472490 STAG3L3P0CL85 134 aa10.3□□□□□ -0.76
BRCA1-211ENST00000472490 AKAP14Q86UN6 197 aa10.3□□□□□ -0.76
BRCA1-211ENST00000472490 Q8NAQ8 132 aa10.3□□□□□ -0.76
BRCA1-211ENST00000472490 LINC00477Q96M19 166 aa10.3□□□□□ -0.76
BRCA1-211ENST00000472490 ODF3Q96PU9 254 aa10.3□□□□□ -0.76
BRCA1-211ENST00000472490 Q9H3A6 140 aa10.3□□□□□ -0.76
BRCA1-211ENST00000472490 X6R8D5 127 aa10.3□□□□□ -0.76
BRCA1-211ENST00000472490 IGHV4-28A0A0C4DH34 117 aa10.29□□□□□ -0.76
BRCA1-211ENST00000472490 PRAC2D3DTV9 90 aa10.29□□□□□ -0.76
BRCA1-211ENST00000472490 NPIPB6E9PJ23 425 aa10.29□□□□□ -0.76
BRCA1-211ENST00000472490 HMGB3O15347 200 aaKnown RBP10.29□□□□□ -0.76
BRCA1-211ENST00000472490 HBE1P02100 147 aa10.29□□□□□ -0.76
BRCA1-211ENST00000472490 ARL14EPLP0DKL9 152 aa10.29□□□□□ -0.76
BRCA1-211ENST00000472490 LEPP41159 167 aa10.29□□□□□ -0.76
BRCA1-211ENST00000472490 CASC10Q5T4H9 136 aa10.29□□□□□ -0.76
BRCA1-211ENST00000472490 TMEM256Q8N2U0 113 aa10.29□□□□□ -0.76
BRCA1-211ENST00000472490 C11orf45Q8TAV5 145 aa10.29□□□□□ -0.76
BRCA1-211ENST00000472490 CMTM2Q8TAZ6 248 aa10.29□□□□□ -0.76
BRCA1-211ENST00000472490 PHYHIPLQ96FC7 376 aa10.29□□□□□ -0.76
BRCA1-211ENST00000472490 HYLS1Q96M11 299 aa10.29□□□□□ -0.76
BRCA1-211ENST00000472490 C20orf144Q9BQM9 153 aa10.29□□□□□ -0.76
BRCA1-211ENST00000472490 ZNF471Q9BX82 626 aaPredicted RBP10.29□□□□□ -0.76
BRCA1-211ENST00000472490 OTORQ9NRC9 128 aa10.29□□□□□ -0.76
BRCA1-211ENST00000472490 TMEM167BQ9NRX6 74 aa10.29□□□□□ -0.76
BRCA1-211ENST00000472490 hCG_2014768A0A024R1R8 64 aa10.28□□□□□ -0.76
BRCA1-211ENST00000472490 C1QBP02746 253 aa10.28□□□□□ -0.76
BRCA1-211ENST00000472490 SEC11BP0C7V7 166 aa10.28□□□□□ -0.76
BRCA1-211ENST00000472490 RRN3P1Q2M238 152 aa10.28□□□□□ -0.76
BRCA1-211ENST00000472490 TMEM78Q5T7P6 136 aa10.28□□□□□ -0.76
BRCA1-211ENST00000472490 ARL6IP6Q8N6S5 226 aa10.28□□□□□ -0.76
BRCA1-211ENST00000472490 CTXND1A0A1B0GTU2 59 aa10.27□□□□□ -0.77
BRCA1-211ENST00000472490 RBAKDNA6NC62 111 aa10.27□□□□□ -0.77
BRCA1-211ENST00000472490 UMAD1C9J7I0 102 aa10.27□□□□□ -0.77
BRCA1-211ENST00000472490 DEFB4AO15263 64 aa10.27□□□□□ -0.77
BRCA1-211ENST00000472490 CRXO43186 299 aaPredicted RBP10.27□□□□□ -0.77
BRCA1-211ENST00000472490 SLC25A5P05141 298 aaKnown RBP10.27□□□□□ -0.77
BRCA1-211ENST00000472490 C9orf47Q6ZRZ4 202 aa10.27□□□□□ -0.77
BRCA1-211ENST00000472490 TMUB2Q71RG4 321 aa10.27□□□□□ -0.77
BRCA1-211ENST00000472490 BAP18Q8IXM2 172 aa10.27□□□□□ -0.77
BRCA1-211ENST00000472490 C1orf158Q8N1D5 194 aa10.27□□□□□ -0.77
BRCA1-211ENST00000472490 HUWE1Q7Z6Z7 4374 aaKnown RBP10.26□□□□□ -0.77
BRCA1-211ENST00000472490 TRAV12-2A0A075B6T6 113 aa10.26□□□□□ -0.77
BRCA1-211ENST00000472490 TEX48A0A1B0GUV7 120 aa10.26□□□□□ -0.77
BRCA1-211ENST00000472490 PGPA6NDG6 321 aa10.26□□□□□ -0.77
BRCA1-211ENST00000472490 CXorf65A6NEN9 183 aa10.26□□□□□ -0.77
BRCA1-211ENST00000472490 EIF3GO75821 320 aaKnown RBP eCLIP10.26□□□□□ -0.77
BRCA1-211ENST00000472490 RBMY1A1P0DJD3 496 aaKnown RBP10.26□□□□□ -0.77
BRCA1-211ENST00000472490 RBMY1CP0DJD4 496 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms