RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 NRARPQ7Z6K4 114 aa5.62□□□□□ -1.51
USP48-207ENST00000471752 LRRC20Q8TCA0 184 aa5.62□□□□□ -1.51
USP48-207ENST00000471752 RNASE8Q8TDE3 154 aaKnown RBP5.62□□□□□ -1.51
USP48-207ENST00000471752 DEDD2Q8WXF8 326 aa5.62□□□□□ -1.51
USP48-207ENST00000471752 TRAV12-3A0A0B4J271 114 aa5.61□□□□□ -1.51
USP48-207ENST00000471752 CBY3A6NI87 242 aa5.61□□□□□ -1.51
USP48-207ENST00000471752 COX7A2P2O60397 106 aa5.61□□□□□ -1.51
USP48-207ENST00000471752 PYYP10082 97 aa5.61□□□□□ -1.51
USP48-207ENST00000471752 TSPOP30536 169 aa5.61□□□□□ -1.51
USP48-207ENST00000471752 FUSP35637 526 aaKnown RBP eCLIP5.61□□□□□ -1.51
USP48-207ENST00000471752 CAMLGP49069 296 aa5.61□□□□□ -1.51
USP48-207ENST00000471752 BCAP31P51572 246 aa5.61□□□□□ -1.51
USP48-207ENST00000471752 TAS2R30P59541 319 aa5.61□□□□□ -1.51
USP48-207ENST00000471752 TAS2R60P59551 318 aa5.61□□□□□ -1.51
USP48-207ENST00000471752 IFITM3Q01628 133 aa5.61□□□□□ -1.51
USP48-207ENST00000471752 CD300CQ08708 224 aa5.61□□□□□ -1.51
USP48-207ENST00000471752 RAB32Q13637 225 aa5.61□□□□□ -1.51
USP48-207ENST00000471752 PRR9Q5T870 116 aa5.61□□□□□ -1.51
USP48-207ENST00000471752 C1orf134Q5TEV5 83 aa5.61□□□□□ -1.51
USP48-207ENST00000471752 C10orf113Q5VZT2 155 aa5.61□□□□□ -1.51
USP48-207ENST00000471752 ZNF431Q8TF32 576 aaPredicted RBP5.61□□□□□ -1.51
USP48-207ENST00000471752 FAM210BQ96KR6 192 aa5.61□□□□□ -1.51
USP48-207ENST00000471752 DNAJC4Q9NNZ3 241 aa5.61□□□□□ -1.51
USP48-207ENST00000471752 NUDT15Q9NV35 164 aa5.61□□□□□ -1.51
USP48-207ENST00000471752 MGAT4CQ9UBM8 478 aa5.61□□□□□ -1.51
USP48-207ENST00000471752 TRAV26-1A0A087WT03 109 aa5.6□□□□□ -1.51
USP48-207ENST00000471752 NBDYA0A0U1RRE5 68 aa5.6□□□□□ -1.51
USP48-207ENST00000471752 GAGE12BA1L429 117 aa5.6□□□□□ -1.51
USP48-207ENST00000471752 C5orf51A6NDU8 294 aa5.6□□□□□ -1.51
USP48-207ENST00000471752 FNDC10F2Z333 226 aa5.6□□□□□ -1.51
USP48-207ENST00000471752 H0YIZ8 118 aa5.6□□□□□ -1.51
USP48-207ENST00000471752 GAGE7O76087 117 aa5.6□□□□□ -1.51
USP48-207ENST00000471752 H2AFB2P0C5Z0 115 aa5.6□□□□□ -1.51
USP48-207ENST00000471752 GAGE12FP0CL80 117 aa5.6□□□□□ -1.51
USP48-207ENST00000471752 GAGE12GP0CL81 117 aa5.6□□□□□ -1.51
USP48-207ENST00000471752 GAGE12IP0CL82 117 aa5.6□□□□□ -1.51
USP48-207ENST00000471752 CDKN1BP46527 198 aa5.6□□□□□ -1.51
USP48-207ENST00000471752 CAV2P51636 162 aa5.6□□□□□ -1.51
USP48-207ENST00000471752 NHLH2Q02577 135 aa5.6□□□□□ -1.51
USP48-207ENST00000471752 OR5I1Q13606 314 aa5.6□□□□□ -1.51
USP48-207ENST00000471752 ESRGQ1W209 222 aa5.6□□□□□ -1.51
USP48-207ENST00000471752 Q6ZTI0 123 aa5.6□□□□□ -1.51
USP48-207ENST00000471752 EXOC3-AS1Q8N2X6 119 aa5.6□□□□□ -1.51
USP48-207ENST00000471752 C12orf45Q8N5I9 185 aaPredicted RBP5.6□□□□□ -1.51
USP48-207ENST00000471752 LINC00612Q8N6U2 182 aa5.6□□□□□ -1.51
USP48-207ENST00000471752 AGPAT4-IT1Q9H0P7 198 aa5.6□□□□□ -1.51
USP48-207ENST00000471752 PPP1R14DQ9NXH3 145 aa5.6□□□□□ -1.51
USP48-207ENST00000471752 TP53TG3Q9ULZ0 132 aa5.6□□□□□ -1.51
USP48-207ENST00000471752 WDR83OSQ9Y284 106 aa5.6□□□□□ -1.51
USP48-207ENST00000471752 SRRM2Q9UQ35 2752 aaKnown RBP5.59□□□□□ -1.51
USP48-207ENST00000471752 PIGBOS1A0A0B4J2F0 54 aa5.59□□□□□ -1.51
USP48-207ENST00000471752 CENPXA8MT69 81 aa5.59□□□□□ -1.51
USP48-207ENST00000471752 L7N2F9 121 aa5.59□□□□□ -1.51
USP48-207ENST00000471752 ZNF324O75467 553 aaPredicted RBP5.59□□□□□ -1.51
USP48-207ENST00000471752 ATP5G1P05496 136 aa5.59□□□□□ -1.51
USP48-207ENST00000471752 MED14OSP0DP75 135 aa5.59□□□□□ -1.51
USP48-207ENST00000471752 ATP5G3P48201 142 aa5.59□□□□□ -1.51
USP48-207ENST00000471752 S100A10P60903 97 aa5.59□□□□□ -1.51
USP48-207ENST00000471752 VAMP2P63027 116 aa5.59□□□□□ -1.51
USP48-207ENST00000471752 VWC2Q2TAL6 325 aa5.59□□□□□ -1.51
USP48-207ENST00000471752 SAMD13Q5VXD3 122 aa5.59□□□□□ -1.51
USP48-207ENST00000471752 LCN15Q6UWW0 184 aa5.59□□□□□ -1.51
USP48-207ENST00000471752 MIR17HGQ75NE6 70 aa5.59□□□□□ -1.51
USP48-207ENST00000471752 SSX7Q7RTT5 188 aa5.59□□□□□ -1.51
USP48-207ENST00000471752 ZNF546Q86UE3 836 aa5.59□□□□□ -1.51
USP48-207ENST00000471752 BPIFA4PQ86YQ2 179 aa5.59□□□□□ -1.51
USP48-207ENST00000471752 TMEM252Q8N6L7 170 aa5.59□□□□□ -1.51
USP48-207ENST00000471752 VSIG2Q96IQ7 327 aa5.59□□□□□ -1.51
USP48-207ENST00000471752 FAM167A-AS1Q96KT0 104 aa5.59□□□□□ -1.51
USP48-207ENST00000471752 C2orf50Q96LR7 162 aa5.59□□□□□ -1.51
USP48-207ENST00000471752 VGLL1Q99990 258 aa5.59□□□□□ -1.51
USP48-207ENST00000471752 GGACTQ9BVM4 153 aa5.59□□□□□ -1.51
USP48-207ENST00000471752 TMPRSS5Q9H3S3 457 aa5.59□□□□□ -1.51
USP48-207ENST00000471752 GSN-AS1Q9NRJ2 163 aa5.59□□□□□ -1.51
USP48-207ENST00000471752 SLC39A9Q9NUM3 307 aa5.59□□□□□ -1.51
USP48-207ENST00000471752 OR5AC2Q9NZP5 309 aa5.59□□□□□ -1.51
USP48-207ENST00000471752 KLF12Q9Y4X4 402 aa5.59□□□□□ -1.51
USP48-207ENST00000471752 TIMM8BQ9Y5J9 83 aaPredicted RBP5.59□□□□□ -1.51
USP48-207ENST00000471752 TNFRSF18Q9Y5U5 241 aa5.59□□□□□ -1.51
USP48-207ENST00000471752 TRBV19A0A075B6N1 114 aa5.58□□□□□ -1.52
USP48-207ENST00000471752 IGKV2-40A0A087WW87 121 aaPredicted RBP5.58□□□□□ -1.52
USP48-207ENST00000471752 UBE2L5PA0A1B0GUS4 154 aa5.58□□□□□ -1.52
USP48-207ENST00000471752 TEX48A0A1B0GUV7 120 aa5.58□□□□□ -1.52
USP48-207ENST00000471752 NPIPB6E9PJ23 425 aa5.58□□□□□ -1.52
USP48-207ENST00000471752 H7BYZ3 331 aa5.58□□□□□ -1.52
USP48-207ENST00000471752 IGKV2D-40P01614 121 aaPredicted RBP5.58□□□□□ -1.52
USP48-207ENST00000471752 FGF7P21781 194 aa5.58□□□□□ -1.52
USP48-207ENST00000471752 RNASE4P34096 147 aaKnown RBP5.58□□□□□ -1.52
USP48-207ENST00000471752 SULT1A1P50225 295 aa5.58□□□□□ -1.52
USP48-207ENST00000471752 KRTAP10-2P60368 255 aa5.58□□□□□ -1.52
USP48-207ENST00000471752 BTN1A1Q13410 526 aa5.58□□□□□ -1.52
USP48-207ENST00000471752 C11orf72Q8NBR9 251 aa5.58□□□□□ -1.52
USP48-207ENST00000471752 THAP6Q8TBB0 222 aa5.58□□□□□ -1.52
USP48-207ENST00000471752 BLNKQ8WV28 456 aa5.58□□□□□ -1.52
USP48-207ENST00000471752 C16orf74Q96GX8 76 aa5.58□□□□□ -1.52
USP48-207ENST00000471752 FAM19A4Q96LR4 140 aa5.58□□□□□ -1.52
USP48-207ENST00000471752 ATG101Q9BSB4 218 aa5.58□□□□□ -1.52
USP48-207ENST00000471752 SLC25A2Q9BXI2 301 aa5.58□□□□□ -1.52
USP48-207ENST00000471752 KRTAP4-8Q9BYQ9 185 aa5.58□□□□□ -1.52
USP48-207ENST00000471752 LYRM2Q9NU23 88 aaPredicted RBP5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms