RNA–Protein interactions for RNA: ENST00000471697.1

SCN3A-207, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 4

Gene SCN3A, Length 555 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-207ENST00000471697 LY6G6DO95868 133 aa2.36□□□□□ -2.03
SCN3A-207ENST00000471697 LGALS3P17931 250 aaKnown RBP2.36□□□□□ -2.03
SCN3A-207ENST00000471697 DAPP51397 102 aa2.36□□□□□ -2.03
SCN3A-207ENST00000471697 ATP5EP56381 51 aaPredicted RBP2.36□□□□□ -2.03
SCN3A-207ENST00000471697 SPRNQ5BIV9 151 aa2.36□□□□□ -2.03
SCN3A-207ENST00000471697 GUSBP11Q6P575 273 aa2.36□□□□□ -2.03
SCN3A-207ENST00000471697 TIFABQ6ZNK6 161 aa2.36□□□□□ -2.03
SCN3A-207ENST00000471697 LINC00471Q8N535 108 aa2.36□□□□□ -2.03
SCN3A-207ENST00000471697 SLC25A29Q8N8R3 303 aa2.36□□□□□ -2.03
SCN3A-207ENST00000471697 GTSF1Q8WW33 167 aa2.36□□□□□ -2.03
SCN3A-207ENST00000471697 TOMM6Q96B49 74 aa2.36□□□□□ -2.03
SCN3A-207ENST00000471697 LINC00479Q96M42 142 aa2.36□□□□□ -2.03
SCN3A-207ENST00000471697 LINC01600Q96MT4 127 aa2.36□□□□□ -2.03
SCN3A-207ENST00000471697 SCRT1Q9BWW7 348 aa2.36□□□□□ -2.03
SCN3A-207ENST00000471697 GABARAPL1Q9H0R8 117 aa2.36□□□□□ -2.03
SCN3A-207ENST00000471697 DNAJC15Q9Y5T4 150 aa2.36□□□□□ -2.03
SCN3A-207ENST00000471697 MROH2AA6NES4 1674 aa2.36□□□□□ -2.03
SCN3A-207ENST00000471697 USP54Q70EL1 1684 aa2.36□□□□□ -2.03
SCN3A-207ENST00000471697 OBSL1O75147 1896 aa2.36□□□□□ -2.03
SCN3A-207ENST00000471697 LRP4O75096 1905 aa2.36□□□□□ -2.03
SCN3A-207ENST00000471697 RGPD2P0DJD1 1756 aa2.36□□□□□ -2.03
SCN3A-207ENST00000471697 ARHGEF5Q12774 1597 aa2.36□□□□□ -2.03
SCN3A-207ENST00000471697 DIP2BQ9P265 1576 aa2.36□□□□□ -2.03
SCN3A-207ENST00000471697 PATJQ8NI35 1801 aa2.35□□□□□ -2.03
SCN3A-207ENST00000471697 TUBGCP6Q96RT7 1819 aa2.35□□□□□ -2.03
SCN3A-207ENST00000471697 PREX1Q8TCU6 1659 aa2.35□□□□□ -2.03
SCN3A-207ENST00000471697 IGLV1-50A0A075B6I6 118 aa2.35□□□□□ -2.03
SCN3A-207ENST00000471697 IGHV3-72A0A0B4J1Y9 119 aa2.35□□□□□ -2.03
SCN3A-207ENST00000471697 TRBV27A0A0K0K1C4 114 aa2.35□□□□□ -2.03
SCN3A-207ENST00000471697 KLF18A0A0U1RQI7 1052 aa2.35□□□□□ -2.03
SCN3A-207ENST00000471697 A0A1B0GUV1 79 aa2.35□□□□□ -2.03
SCN3A-207ENST00000471697 IGLL5B9A064 214 aa2.35□□□□□ -2.03
SCN3A-207ENST00000471697 H3BUT2 72 aa2.35□□□□□ -2.03
SCN3A-207ENST00000471697 ATOX1O00244 68 aa2.35□□□□□ -2.03
SCN3A-207ENST00000471697 GNGT2O14610 69 aa2.35□□□□□ -2.03
SCN3A-207ENST00000471697 IGKV1-39P01597 117 aa2.35□□□□□ -2.03
SCN3A-207ENST00000471697 IGKV1D-39P04432 117 aa2.35□□□□□ -2.03
SCN3A-207ENST00000471697 ACYP1P07311 99 aa2.35□□□□□ -2.03
SCN3A-207ENST00000471697 COX6A1P12074 109 aa2.35□□□□□ -2.03
SCN3A-207ENST00000471697 CRISP2P16562 243 aa2.35□□□□□ -2.03
SCN3A-207ENST00000471697 COL8A2P25067 703 aa2.35□□□□□ -2.03
SCN3A-207ENST00000471697 MPV17P39210 176 aa2.35□□□□□ -2.03
SCN3A-207ENST00000471697 NPC2P61916 151 aa2.35□□□□□ -2.03
SCN3A-207ENST00000471697 SSBP1Q04837 148 aaKnown RBP2.35□□□□□ -2.03
SCN3A-207ENST00000471697 FOXF1Q12946 379 aa2.35□□□□□ -2.03
SCN3A-207ENST00000471697 ETDBQ3ZM63 59 aa2.35□□□□□ -2.03
SCN3A-207ENST00000471697 NMSQ5H8A3 153 aa2.35□□□□□ -2.03
SCN3A-207ENST00000471697 FAM78AQ5JUQ0 283 aa2.35□□□□□ -2.03
SCN3A-207ENST00000471697 ZNF678Q5SXM1 525 aa2.35□□□□□ -2.03
SCN3A-207ENST00000471697 LAIR2Q6ISS4 152 aa2.35□□□□□ -2.03
SCN3A-207ENST00000471697 TMEM91Q6ZNR0 172 aa2.35□□□□□ -2.03
SCN3A-207ENST00000471697 AMN1Q8IY45 258 aa2.35□□□□□ -2.03
SCN3A-207ENST00000471697 ZNF101Q8IZC7 436 aa2.35□□□□□ -2.03
SCN3A-207ENST00000471697 LINC00311Q8N616 119 aa2.35□□□□□ -2.03
SCN3A-207ENST00000471697 ZNF645Q8N7E2 425 aa2.35□□□□□ -2.03
SCN3A-207ENST00000471697 OR8A1Q8NGG7 326 aa2.35□□□□□ -2.03
SCN3A-207ENST00000471697 BRK1Q8WUW1 75 aa2.35□□□□□ -2.03
SCN3A-207ENST00000471697 C20orf78Q9BR46 151 aa2.35□□□□□ -2.03
SCN3A-207ENST00000471697 TMEM204Q9BSN7 226 aa2.35□□□□□ -2.03
SCN3A-207ENST00000471697 SHANK2-AS3Q9BTD1 123 aa2.35□□□□□ -2.03
SCN3A-207ENST00000471697 CHAC1Q9BUX1 264 aa2.35□□□□□ -2.03
SCN3A-207ENST00000471697 SND1-IT1Q9HBX3 110 aa2.35□□□□□ -2.03
SCN3A-207ENST00000471697 SVILO95425 2214 aa2.35□□□□□ -2.03
SCN3A-207ENST00000471697 TRPM2O94759 1503 aa2.35□□□□□ -2.03
SCN3A-207ENST00000471697 CDC42BPGQ6DT37 1551 aa2.35□□□□□ -2.03
SCN3A-207ENST00000471697 BTAF1O14981 1849 aa2.35□□□□□ -2.03
SCN3A-207ENST00000471697 SNRNP200O75643 2136 aaKnown RBP2.35□□□□□ -2.03
SCN3A-207ENST00000471697 MYO3AQ8NEV4 1616 aa2.35□□□□□ -2.03
SCN3A-207ENST00000471697 MAP3K4Q9Y6R4 1608 aa2.35□□□□□ -2.03
SCN3A-207ENST00000471697 ANAPC1Q9H1A4 1944 aa2.34□□□□□ -2.03
SCN3A-207ENST00000471697 EXPH5Q8NEV8 1989 aa2.34□□□□□ -2.03
SCN3A-207ENST00000471697 DSCAMO60469 2012 aa2.34□□□□□ -2.03
SCN3A-207ENST00000471697 SIPA1L3O60292 1781 aaPredicted RBP2.34□□□□□ -2.03
SCN3A-207ENST00000471697 KCPQ6ZWJ8 1503 aa2.34□□□□□ -2.03
SCN3A-207ENST00000471697 TRBV20OR9-2A0A075B6H5 130 aa2.34□□□□□ -2.03
SCN3A-207ENST00000471697 IGLV7-46A0A075B6I9 117 aa2.34□□□□□ -2.03
SCN3A-207ENST00000471697 TRAV41A0A0B4J266 112 aa2.34□□□□□ -2.03
SCN3A-207ENST00000471697 A8MWL6 223 aa2.34□□□□□ -2.03
SCN3A-207ENST00000471697 SRRM5B3KS81 715 aa2.34□□□□□ -2.03
SCN3A-207ENST00000471697 SDCBPO00560 298 aaPredicted RBP2.34□□□□□ -2.03
SCN3A-207ENST00000471697 SYNGR2O43760 224 aa2.34□□□□□ -2.03
SCN3A-207ENST00000471697 ZNF73O43830 326 aaPredicted RBP2.34□□□□□ -2.03
SCN3A-207ENST00000471697 SOD1P00441 154 aa2.34□□□□□ -2.03
SCN3A-207ENST00000471697 ZNF823P16415 610 aa2.34□□□□□ -2.03
SCN3A-207ENST00000471697 CBLN1P23435 193 aa2.34□□□□□ -2.03
SCN3A-207ENST00000471697 SMIM11AP58511 58 aa2.34□□□□□ -2.03
SCN3A-207ENST00000471697 KRTDAPP60985 99 aa2.34□□□□□ -2.03
SCN3A-207ENST00000471697 FGF12P61328 243 aa2.34□□□□□ -2.03
SCN3A-207ENST00000471697 SNRPFP62306 86 aaKnown RBP2.34□□□□□ -2.03
SCN3A-207ENST00000471697 CCL8P80075 99 aa2.34□□□□□ -2.03
SCN3A-207ENST00000471697 WFDC2Q14508 124 aa2.34□□□□□ -2.03
SCN3A-207ENST00000471697 IGFBP7Q16270 282 aa2.34□□□□□ -2.03
SCN3A-207ENST00000471697 MPV17LQ2QL34 196 aa2.34□□□□□ -2.03
SCN3A-207ENST00000471697 TMEM155Q4W5P6 130 aa2.34□□□□□ -2.03
SCN3A-207ENST00000471697 C12orf73Q69YU5 71 aa2.34□□□□□ -2.03
SCN3A-207ENST00000471697 LGALS9CQ6DKI2 356 aa2.34□□□□□ -2.03
SCN3A-207ENST00000471697 TMEM136Q6ZRR5 245 aa2.34□□□□□ -2.03
SCN3A-207ENST00000471697 PHF5AQ7RTV0 110 aaKnown RBP2.34□□□□□ -2.03
SCN3A-207ENST00000471697 HMGN2P46Q86SG4 172 aa2.34□□□□□ -2.03
SCN3A-207ENST00000471697 OR5AS1Q8N127 324 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms