RNA–Protein interactions for RNA: ENST00000471344.1

COL1A1-203, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 1,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-203ENST00000471344 VWC2Q2TAL6 325 aa10.84□□□□□ -0.67
COL1A1-203ENST00000471344 BPIFA4PQ86YQ2 179 aa10.84□□□□□ -0.67
COL1A1-203ENST00000471344 TMEM252Q8N6L7 170 aa10.84□□□□□ -0.67
COL1A1-203ENST00000471344 SAT2Q96F10 170 aaPredicted RBP10.84□□□□□ -0.67
COL1A1-203ENST00000471344 NACAE9PAV3 2078 aa10.83□□□□□ -0.68
COL1A1-203ENST00000471344 SULT1A1P50225 295 aa10.83□□□□□ -0.68
COL1A1-203ENST00000471344 B2MP61769 119 aa10.83□□□□□ -0.68
COL1A1-203ENST00000471344 BAXQ07812 192 aa10.83□□□□□ -0.68
COL1A1-203ENST00000471344 RGS21Q2M5E4 152 aa10.83□□□□□ -0.68
COL1A1-203ENST00000471344 PPP1R1CQ8WVI7 109 aa10.83□□□□□ -0.68
COL1A1-203ENST00000471344 LINC01587Q99440 93 aa10.83□□□□□ -0.68
COL1A1-203ENST00000471344 SLC50A1Q9BRV3 221 aa10.83□□□□□ -0.68
COL1A1-203ENST00000471344 DNAJC4Q9NNZ3 241 aa10.83□□□□□ -0.68
COL1A1-203ENST00000471344 PPP1R14DQ9NXH3 145 aa10.83□□□□□ -0.68
COL1A1-203ENST00000471344 RTL8CO15255 209 aa10.82□□□□□ -0.68
COL1A1-203ENST00000471344 TSPOP30536 169 aa10.82□□□□□ -0.68
COL1A1-203ENST00000471344 S100A11P31949 105 aa10.82□□□□□ -0.68
COL1A1-203ENST00000471344 NHLH2Q02577 135 aa10.82□□□□□ -0.68
COL1A1-203ENST00000471344 GCSAMLQ5JQS6 135 aa10.82□□□□□ -0.68
COL1A1-203ENST00000471344 Q6ZRG5 221 aa10.82□□□□□ -0.68
COL1A1-203ENST00000471344 UBE2DNLQ8IWF7 75 aa10.82□□□□□ -0.68
COL1A1-203ENST00000471344 FAM210BQ96KR6 192 aa10.82□□□□□ -0.68
COL1A1-203ENST00000471344 SLC39A9Q9NUM3 307 aa10.82□□□□□ -0.68
COL1A1-203ENST00000471344 ZNF586Q9NXT0 402 aa10.82□□□□□ -0.68
COL1A1-203ENST00000471344 DNAH11Q96DT5 4516 aa10.82□□□□□ -0.68
COL1A1-203ENST00000471344 LYRM9A8MSI8 78 aa10.81□□□□□ -0.68
COL1A1-203ENST00000471344 J3KRW8 73 aa10.81□□□□□ -0.68
COL1A1-203ENST00000471344 MPC2O95563 127 aa10.81□□□□□ -0.68
COL1A1-203ENST00000471344 FGF7P21781 194 aa10.81□□□□□ -0.68
COL1A1-203ENST00000471344 CDKN1BP46527 198 aa10.81□□□□□ -0.68
COL1A1-203ENST00000471344 HBG1P69891 147 aa10.81□□□□□ -0.68
COL1A1-203ENST00000471344 HBG2P69892 147 aa10.81□□□□□ -0.68
COL1A1-203ENST00000471344 GFI1BQ5VTD9 330 aa10.81□□□□□ -0.68
COL1A1-203ENST00000471344 STX12Q86Y82 276 aa10.81□□□□□ -0.68
COL1A1-203ENST00000471344 CHAC2Q8WUX2 184 aa10.81□□□□□ -0.68
COL1A1-203ENST00000471344 PXMP4Q9Y6I8 212 aa10.81□□□□□ -0.68
COL1A1-203ENST00000471344 A0A1B0GVY2 172 aa10.8□□□□□ -0.68
COL1A1-203ENST00000471344 RPL29P47914 159 aaKnown RBP10.8□□□□□ -0.68
COL1A1-203ENST00000471344 TAS2R60P59551 318 aa10.8□□□□□ -0.68
COL1A1-203ENST00000471344 ATP6V1FQ16864 119 aa10.8□□□□□ -0.68
COL1A1-203ENST00000471344 Q5BKY6 102 aa10.8□□□□□ -0.68
COL1A1-203ENST00000471344 TMEM256Q8N2U0 113 aa10.8□□□□□ -0.68
COL1A1-203ENST00000471344 OR1L4Q8NGR5 311 aa10.8□□□□□ -0.68
COL1A1-203ENST00000471344 RNASE8Q8TDE3 154 aaKnown RBP10.8□□□□□ -0.68
COL1A1-203ENST00000471344 MBD2Q9UBB5 411 aa10.8□□□□□ -0.68
COL1A1-203ENST00000471344 M0R3E3 92 aa10.79□□□□□ -0.68
COL1A1-203ENST00000471344 CT45A10P0DMU9 189 aa10.79□□□□□ -0.68
COL1A1-203ENST00000471344 PYYP10082 97 aa10.79□□□□□ -0.68
COL1A1-203ENST00000471344 OR10J6PQ8NGY7 276 aa10.79□□□□□ -0.68
COL1A1-203ENST00000471344 THAP6Q8TBB0 222 aa10.79□□□□□ -0.68
COL1A1-203ENST00000471344 C16orf74Q96GX8 76 aa10.79□□□□□ -0.68
COL1A1-203ENST00000471344 PFDN5Q99471 154 aa10.79□□□□□ -0.68
COL1A1-203ENST00000471344 NOP10Q9NPE3 64 aaKnown RBP10.79□□□□□ -0.68
COL1A1-203ENST00000471344 E5RGE8 158 aa10.78□□□□□ -0.68
COL1A1-203ENST00000471344 F5H768 121 aa10.78□□□□□ -0.68
COL1A1-203ENST00000471344 NDUFB4O95168 129 aa10.78□□□□□ -0.68
COL1A1-203ENST00000471344 ERCC8Q13216 396 aa10.78□□□□□ -0.68
COL1A1-203ENST00000471344 GUK1Q16774 197 aa10.78□□□□□ -0.68
COL1A1-203ENST00000471344 Q6ZR54 194 aa10.78□□□□□ -0.68
COL1A1-203ENST00000471344 NPCDR1Q9BY65 106 aa10.78□□□□□ -0.68
COL1A1-203ENST00000471344 MED28Q9H204 178 aa10.78□□□□□ -0.68
COL1A1-203ENST00000471344 TRBV19A0A075B6N1 114 aa10.77□□□□□ -0.69
COL1A1-203ENST00000471344 PRSS29PA6NIE9 313 aa10.77□□□□□ -0.69
COL1A1-203ENST00000471344 NPIPB6E9PJ23 425 aa10.77□□□□□ -0.69
COL1A1-203ENST00000471344 MPDU1O75352 247 aa10.77□□□□□ -0.69
COL1A1-203ENST00000471344 CYCSP99999 105 aaKnown RBP10.77□□□□□ -0.69
COL1A1-203ENST00000471344 LGALS9BQ3B8N2 356 aa10.77□□□□□ -0.69
COL1A1-203ENST00000471344 LINC00336Q6ZUF6 198 aa10.77□□□□□ -0.69
COL1A1-203ENST00000471344 OR5C1Q8NGR4 320 aa10.77□□□□□ -0.69
COL1A1-203ENST00000471344 TMEM263Q8WUH6 116 aaKnown RBP10.77□□□□□ -0.69
COL1A1-203ENST00000471344 KRTAP17-1Q9BYP8 105 aa10.77□□□□□ -0.69
COL1A1-203ENST00000471344 TIMM8BQ9Y5J9 83 aaPredicted RBP10.77□□□□□ -0.69
COL1A1-203ENST00000471344 TRAV12-3A0A0B4J271 114 aa10.76□□□□□ -0.69
COL1A1-203ENST00000471344 H7BYZ3 331 aa10.76□□□□□ -0.69
COL1A1-203ENST00000471344 ZNF253O75346 499 aa10.76□□□□□ -0.69
COL1A1-203ENST00000471344 RLN2P04090 185 aa10.76□□□□□ -0.69
COL1A1-203ENST00000471344 CLINT1Q14677 625 aa10.76□□□□□ -0.69
COL1A1-203ENST00000471344 RNF212Q495C1 297 aa10.76□□□□□ -0.69
COL1A1-203ENST00000471344 EXOC3-AS1Q8N2X6 119 aa10.76□□□□□ -0.69
COL1A1-203ENST00000471344 BLNKQ8WV28 456 aa10.76□□□□□ -0.69
COL1A1-203ENST00000471344 SLC25A2Q9BXI2 301 aa10.76□□□□□ -0.69
COL1A1-203ENST00000471344 CBY3A6NI87 242 aa10.75□□□□□ -0.69
COL1A1-203ENST00000471344 G3V3Q6 166 aa10.75□□□□□ -0.69
COL1A1-203ENST00000471344 NUDT3O95989 172 aa10.75□□□□□ -0.69
COL1A1-203ENST00000471344 ATP5G1P05496 136 aa10.75□□□□□ -0.69
COL1A1-203ENST00000471344 ATP5G3P48201 142 aa10.75□□□□□ -0.69
COL1A1-203ENST00000471344 MIR17HGQ75NE6 70 aa10.75□□□□□ -0.69
COL1A1-203ENST00000471344 C15orf53Q8NAA6 179 aa10.75□□□□□ -0.69
COL1A1-203ENST00000471344 FAM167A-AS1Q96KT0 104 aa10.75□□□□□ -0.69
COL1A1-203ENST00000471344 C20orf144Q9BQM9 153 aa10.75□□□□□ -0.69
COL1A1-203ENST00000471344 SMIM3Q9BZL3 60 aa10.75□□□□□ -0.69
COL1A1-203ENST00000471344 SLC25A31Q9H0C2 315 aa10.75□□□□□ -0.69
COL1A1-203ENST00000471344 WFDC1Q9HC57 220 aa10.75□□□□□ -0.69
COL1A1-203ENST00000471344 ZNF493Q6ZR52 646 aa10.74□□□□□ -0.69
COL1A1-203ENST00000471344 RNF141Q8WVD5 230 aa10.74□□□□□ -0.69
COL1A1-203ENST00000471344 TMEM14CQ9P0S9 112 aa10.74□□□□□ -0.69
COL1A1-203ENST00000471344 HSPB11Q9Y547 144 aa10.74□□□□□ -0.69
COL1A1-203ENST00000471344 PCLOQ9Y6V0 5065 aa10.74□□□□□ -0.69
COL1A1-203ENST00000471344 IGKV2-40A0A087WW87 121 aaPredicted RBP10.73□□□□□ -0.69
COL1A1-203ENST00000471344 IGKV2D-40P01614 121 aaPredicted RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms