RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 C9orf66Q5T8R8 295 aa7.38□□□□□ -1.23
CCM2-204ENST00000470837 LCN12Q6JVE5 192 aa7.38□□□□□ -1.23
CCM2-204ENST00000470837 OR2K2Q8NGT1 345 aa7.38□□□□□ -1.23
CCM2-204ENST00000470837 MRPL53Q96EL3 112 aaKnown RBP7.38□□□□□ -1.23
CCM2-204ENST00000470837 SPAG8Q99932 426 aaPredicted RBP7.38□□□□□ -1.23
CCM2-204ENST00000470837 SMIM7Q9BQ49 75 aa7.38□□□□□ -1.23
CCM2-204ENST00000470837 NIPSNAP3BQ9BS92 247 aa7.38□□□□□ -1.23
CCM2-204ENST00000470837 GPR61Q9BZJ8 451 aa7.38□□□□□ -1.23
CCM2-204ENST00000470837 SELENOKQ9Y6D0 94 aa7.38□□□□□ -1.23
CCM2-204ENST00000470837 CUBNO60494 3623 aa7.38□□□□□ -1.23
CCM2-204ENST00000470837 ATRQ13535 2644 aa7.37□□□□□ -1.23
CCM2-204ENST00000470837 FBLL1A6NHQ2 334 aaKnown RBP7.37□□□□□ -1.23
CCM2-204ENST00000470837 TSPAN4O14817 238 aa7.37□□□□□ -1.23
CCM2-204ENST00000470837 TCRAP04437 139 aa7.37□□□□□ -1.23
CCM2-204ENST00000470837 CMC4P56277 68 aaPredicted RBP7.37□□□□□ -1.23
CCM2-204ENST00000470837 GNG5P63218 68 aa7.37□□□□□ -1.23
CCM2-204ENST00000470837 PSG3Q16557 428 aa7.37□□□□□ -1.23
CCM2-204ENST00000470837 CD300EQ496F6 205 aaPredicted RBP7.37□□□□□ -1.23
CCM2-204ENST00000470837 FAM90A2PQ658T7 463 aa7.37□□□□□ -1.23
CCM2-204ENST00000470837 GOLT1AQ6ZVE7 132 aa7.37□□□□□ -1.23
CCM2-204ENST00000470837 CCDC28AQ8IWP9 274 aa7.37□□□□□ -1.23
CCM2-204ENST00000470837 RNF182Q8N6D2 247 aa7.37□□□□□ -1.23
CCM2-204ENST00000470837 OR10J6PQ8NGY7 276 aa7.37□□□□□ -1.23
CCM2-204ENST00000470837 C11orf52Q96A22 123 aa7.37□□□□□ -1.23
CCM2-204ENST00000470837 FMC1Q96HJ9 113 aa7.37□□□□□ -1.23
CCM2-204ENST00000470837 SEC11CQ9BY50 192 aa7.37□□□□□ -1.23
CCM2-204ENST00000470837 PARLQ9H300 379 aa7.37□□□□□ -1.23
CCM2-204ENST00000470837 DIRC3C9JPN6 131 aa7.36□□□□□ -1.23
CCM2-204ENST00000470837 C9JQL5 133 aa7.36□□□□□ -1.23
CCM2-204ENST00000470837 M0R3E3 92 aa7.36□□□□□ -1.23
CCM2-204ENST00000470837 APOC3P02656 99 aa7.36□□□□□ -1.23
CCM2-204ENST00000470837 RPL35P42766 123 aaKnown RBP7.36□□□□□ -1.23
CCM2-204ENST00000470837 GNG4P50150 75 aa7.36□□□□□ -1.23
CCM2-204ENST00000470837 PSMG4Q5JS54 123 aa7.36□□□□□ -1.23
CCM2-204ENST00000470837 IGFL4Q6B9Z1 124 aa7.36□□□□□ -1.23
CCM2-204ENST00000470837 EBLN2Q6P2I7 272 aa7.36□□□□□ -1.23
CCM2-204ENST00000470837 ADAMTSL5Q6ZMM2 481 aa7.36□□□□□ -1.23
CCM2-204ENST00000470837 TMEM61Q8N0U2 210 aa7.36□□□□□ -1.23
CCM2-204ENST00000470837 NDFIP1Q9BT67 221 aa7.36□□□□□ -1.23
CCM2-204ENST00000470837 PPP1R14DQ9NXH3 145 aa7.36□□□□□ -1.23
CCM2-204ENST00000470837 TRAV8-2A0A0B4J237 113 aa7.35□□□□□ -1.23
CCM2-204ENST00000470837 K7EQG2 157 aa7.35□□□□□ -1.23
CCM2-204ENST00000470837 M0R036 132 aa7.35□□□□□ -1.23
CCM2-204ENST00000470837 ZNF688P0C7X2 276 aa7.35□□□□□ -1.23
CCM2-204ENST00000470837 RIPPLY3P57055 190 aa7.35□□□□□ -1.23
CCM2-204ENST00000470837 TAS2R60P59551 318 aa7.35□□□□□ -1.23
CCM2-204ENST00000470837 TMEM241Q24JQ0 296 aa7.35□□□□□ -1.23
CCM2-204ENST00000470837 TMEM78Q5T7P6 136 aa7.35□□□□□ -1.23
CCM2-204ENST00000470837 SVBPQ8N300 66 aa7.35□□□□□ -1.23
CCM2-204ENST00000470837 DCANP1Q8TF63 244 aa7.35□□□□□ -1.23
CCM2-204ENST00000470837 BIN3Q9NQY0 253 aa7.35□□□□□ -1.23
CCM2-204ENST00000470837 NAT8Q9UHE5 227 aa7.35□□□□□ -1.23
CCM2-204ENST00000470837 RBAKDNA6NC62 111 aa7.34□□□□□ -1.23
CCM2-204ENST00000470837 ZNF705FA8MVS1 300 aaPredicted RBP7.34□□□□□ -1.23
CCM2-204ENST00000470837 SOCS3O14543 225 aa7.34□□□□□ -1.23
CCM2-204ENST00000470837 IGLV1-51P01701 117 aa7.34□□□□□ -1.23
CCM2-204ENST00000470837 HLA-DMBP28068 263 aa7.34□□□□□ -1.23
CCM2-204ENST00000470837 FLI1Q01543 452 aaPredicted RBP7.34□□□□□ -1.23
CCM2-204ENST00000470837 PNRC1Q12796 327 aaPredicted RBP7.34□□□□□ -1.23
CCM2-204ENST00000470837 TMEM183BQ1AE95 376 aa7.34□□□□□ -1.23
CCM2-204ENST00000470837 PRNTQ86SH4 94 aa7.34□□□□□ -1.23
CCM2-204ENST00000470837 BAGE2Q86Y30 109 aa7.34□□□□□ -1.23
CCM2-204ENST00000470837 TMEM75Q8N9X5 138 aa7.34□□□□□ -1.23
CCM2-204ENST00000470837 C2CD4CQ8TF44 421 aa7.34□□□□□ -1.23
CCM2-204ENST00000470837 TVP23CQ96ET8 276 aa7.34□□□□□ -1.23
CCM2-204ENST00000470837 IGKV2-40A0A087WW87 121 aaPredicted RBP7.33□□□□□ -1.24
CCM2-204ENST00000470837 TRAV34A0A0B4J273 112 aa7.33□□□□□ -1.24
CCM2-204ENST00000470837 C9JCJ5 164 aa7.33□□□□□ -1.24
CCM2-204ENST00000470837 DUSP14O95147 198 aaKnown RBP7.33□□□□□ -1.24
CCM2-204ENST00000470837 SNAPINO95295 136 aa7.33□□□□□ -1.24
CCM2-204ENST00000470837 IGKV2D-40P01614 121 aaPredicted RBP7.33□□□□□ -1.24
CCM2-204ENST00000470837 CT45A10P0DMU9 189 aa7.33□□□□□ -1.24
CCM2-204ENST00000470837 MGST1P10620 155 aaKnown RBP7.33□□□□□ -1.24
CCM2-204ENST00000470837 HIST1H1AQ02539 215 aaPredicted RBP7.33□□□□□ -1.24
CCM2-204ENST00000470837 ADIRFQ15847 76 aa7.33□□□□□ -1.24
CCM2-204ENST00000470837 CENPWQ5EE01 88 aa7.33□□□□□ -1.24
CCM2-204ENST00000470837 SAPCD1Q5SSQ6 148 aa7.33□□□□□ -1.24
CCM2-204ENST00000470837 GTSCR1Q86UQ5 136 aa7.33□□□□□ -1.24
CCM2-204ENST00000470837 DERL1Q9BUN8 251 aa7.33□□□□□ -1.24
CCM2-204ENST00000470837 ZMAT5Q9UDW3 170 aaKnown RBP7.33□□□□□ -1.24
CCM2-204ENST00000470837 PSG8Q9UQ74 426 aa7.33□□□□□ -1.24
CCM2-204ENST00000470837 ZFP30Q9Y2G7 519 aa7.33□□□□□ -1.24
CCM2-204ENST00000470837 CARHSP1Q9Y2V2 147 aaKnown RBP7.33□□□□□ -1.24
CCM2-204ENST00000470837 OR11H12B2RN74 326 aa7.32□□□□□ -1.24
CCM2-204ENST00000470837 ADCYAP1P18509 176 aa7.32□□□□□ -1.24
CCM2-204ENST00000470837 DEFB131AP59861 70 aa7.32□□□□□ -1.24
CCM2-204ENST00000470837 PRR31Q5SQ13 230 aa7.32□□□□□ -1.24
CCM2-204ENST00000470837 WFDC9Q8NEX5 89 aa7.32□□□□□ -1.24
CCM2-204ENST00000470837 OR8A1Q8NGG7 326 aa7.32□□□□□ -1.24
CCM2-204ENST00000470837 DAZAP1Q96EP5 407 aaKnown RBP7.32□□□□□ -1.24
CCM2-204ENST00000470837 SMIM12Q96EX1 92 aa7.32□□□□□ -1.24
CCM2-204ENST00000470837 C20orf173Q96LM9 149 aa7.32□□□□□ -1.24
CCM2-204ENST00000470837 SGK494Q96LW2 274 aa7.32□□□□□ -1.24
CCM2-204ENST00000470837 LINC00477Q96M19 166 aa7.32□□□□□ -1.24
CCM2-204ENST00000470837 LINC00479Q96M42 142 aa7.32□□□□□ -1.24
CCM2-204ENST00000470837 KLF12Q9Y4X4 402 aa7.32□□□□□ -1.24
CCM2-204ENST00000470837 LY96Q9Y6Y9 160 aa7.32□□□□□ -1.24
CCM2-204ENST00000470837 TRAV8-1A0A0A6YYK1 113 aa7.31□□□□□ -1.24
CCM2-204ENST00000470837 TRBV6-1A0A0K0K1D8 114 aa7.31□□□□□ -1.24
CCM2-204ENST00000470837 LTAP01374 205 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms