RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 CRYBB3P26998 211 aa4.63□□□□□ -1.67
PTCD3-208ENST00000469585 SULT1A1P50225 295 aa4.63□□□□□ -1.67
PTCD3-208ENST00000469585 OR2F1Q13607 317 aa4.63□□□□□ -1.67
PTCD3-208ENST00000469585 SIGLEC15Q6ZMC9 328 aa4.63□□□□□ -1.67
PTCD3-208ENST00000469585 INO80EQ8NBZ0 244 aaPredicted RBP4.63□□□□□ -1.67
PTCD3-208ENST00000469585 OR1L4Q8NGR5 311 aa4.63□□□□□ -1.67
PTCD3-208ENST00000469585 FNDC4Q9H6D8 234 aaPredicted RBP4.63□□□□□ -1.67
PTCD3-208ENST00000469585 SLC25A22Q9H936 323 aa4.63□□□□□ -1.67
PTCD3-208ENST00000469585 LYRM2Q9NU23 88 aaPredicted RBP4.63□□□□□ -1.67
PTCD3-208ENST00000469585 MLXQ9UH92 298 aa4.63□□□□□ -1.67
PTCD3-208ENST00000469585 IGHV3OR16-13A0A075B7E8 117 aa4.62□□□□□ -1.67
PTCD3-208ENST00000469585 IGHV3-74A0A0B4J1X5 117 aa4.62□□□□□ -1.67
PTCD3-208ENST00000469585 IGHV3-66A0A0C4DH42 116 aa4.62□□□□□ -1.67
PTCD3-208ENST00000469585 C7orf66A4D0T2 115 aa4.62□□□□□ -1.67
PTCD3-208ENST00000469585 MPTX1A8MV57 137 aa4.62□□□□□ -1.67
PTCD3-208ENST00000469585 CST7O76096 145 aa4.62□□□□□ -1.67
PTCD3-208ENST00000469585 IGKV1-17P01599 117 aa4.62□□□□□ -1.67
PTCD3-208ENST00000469585 LINC00869P0C866 280 aa4.62□□□□□ -1.67
PTCD3-208ENST00000469585 RPL7P18124 248 aaKnown RBP4.62□□□□□ -1.67
PTCD3-208ENST00000469585 CAMLGP49069 296 aa4.62□□□□□ -1.67
PTCD3-208ENST00000469585 OPCMLQ14982 345 aa4.62□□□□□ -1.67
PTCD3-208ENST00000469585 TMEM41BQ5BJD5 291 aa4.62□□□□□ -1.67
PTCD3-208ENST00000469585 EBLN2Q6P2I7 272 aa4.62□□□□□ -1.67
PTCD3-208ENST00000469585 CYP2G1PQ6ZSU1 146 aa4.62□□□□□ -1.67
PTCD3-208ENST00000469585 GATAD1Q8WUU5 269 aa4.62□□□□□ -1.67
PTCD3-208ENST00000469585 RNF2Q99496 336 aa4.62□□□□□ -1.67
PTCD3-208ENST00000469585 GGTLC1Q9BX51 225 aa4.62□□□□□ -1.67
PTCD3-208ENST00000469585 NRN1Q9NPD7 142 aa4.62□□□□□ -1.67
PTCD3-208ENST00000469585 NBEAL1Q6ZS30 2694 aa4.61□□□□□ -1.67
PTCD3-208ENST00000469585 UBE2L5PA0A1B0GUS4 154 aa4.61□□□□□ -1.67
PTCD3-208ENST00000469585 FGF7P21781 194 aa4.61□□□□□ -1.67
PTCD3-208ENST00000469585 ZNF266Q14584 549 aa4.61□□□□□ -1.67
PTCD3-208ENST00000469585 ZFP69Q49AA0 526 aa4.61□□□□□ -1.67
PTCD3-208ENST00000469585 C10orf113Q5VZT2 155 aa4.61□□□□□ -1.67
PTCD3-208ENST00000469585 TMEM14EPQ6UXP3 125 aa4.61□□□□□ -1.67
PTCD3-208ENST00000469585 IL34Q6ZMJ4 242 aa4.61□□□□□ -1.67
PTCD3-208ENST00000469585 BPIFA4PQ86YQ2 179 aa4.61□□□□□ -1.67
PTCD3-208ENST00000469585 PPP1R1CQ8WVI7 109 aa4.61□□□□□ -1.67
PTCD3-208ENST00000469585 ARL6Q9H0F7 186 aa4.61□□□□□ -1.67
PTCD3-208ENST00000469585 MS4A6AQ9H2W1 248 aa4.61□□□□□ -1.67
PTCD3-208ENST00000469585 VSIRQ9H7M9 311 aa4.61□□□□□ -1.67
PTCD3-208ENST00000469585 ALG5Q9Y673 324 aa4.61□□□□□ -1.67
PTCD3-208ENST00000469585 U3KQK5 164 aa4.61□□□□□ -1.67
PTCD3-208ENST00000469585 SORL1Q92673 2214 aa4.61□□□□□ -1.67
PTCD3-208ENST00000469585 BORCS7-ASMTA0A0B4J1R7 106 aa4.6□□□□□ -1.67
PTCD3-208ENST00000469585 AGPAT2O15120 278 aa4.6□□□□□ -1.67
PTCD3-208ENST00000469585 SIX6O95475 246 aa4.6□□□□□ -1.67
PTCD3-208ENST00000469585 CD7P09564 240 aa4.6□□□□□ -1.67
PTCD3-208ENST00000469585 C4BPBP20851 252 aa4.6□□□□□ -1.67
PTCD3-208ENST00000469585 TAS2R45P59539 299 aa4.6□□□□□ -1.67
PTCD3-208ENST00000469585 B2MP61769 119 aa4.6□□□□□ -1.67
PTCD3-208ENST00000469585 ZNF90Q03938 601 aa4.6□□□□□ -1.67
PTCD3-208ENST00000469585 CLINT1Q14677 625 aa4.6□□□□□ -1.67
PTCD3-208ENST00000469585 PSMG4Q5JS54 123 aa4.6□□□□□ -1.67
PTCD3-208ENST00000469585 SPATA31B1PQ5VZV4 182 aa4.6□□□□□ -1.67
PTCD3-208ENST00000469585 DEFB125Q8N687 156 aa4.6□□□□□ -1.67
PTCD3-208ENST00000469585 TMEM252Q8N6L7 170 aa4.6□□□□□ -1.67
PTCD3-208ENST00000469585 OR5C1Q8NGR4 320 aa4.6□□□□□ -1.67
PTCD3-208ENST00000469585 LINC00052Q96N35 136 aa4.6□□□□□ -1.67
PTCD3-208ENST00000469585 RPRMQ9NS64 109 aa4.6□□□□□ -1.67
PTCD3-208ENST00000469585 CLEC5AQ9NY25 188 aa4.6□□□□□ -1.67
PTCD3-208ENST00000469585 DOK5Q9P104 306 aa4.6□□□□□ -1.67
PTCD3-208ENST00000469585 UBQLN2Q9UHD9 624 aa4.6□□□□□ -1.67
PTCD3-208ENST00000469585 KIR2DL5BA0A0G2JN68 375 aa4.59□□□□□ -1.67
PTCD3-208ENST00000469585 KIR2DL5BA0A0G2JPC4 375 aa4.59□□□□□ -1.67
PTCD3-208ENST00000469585 A0A1W2PPV4 95 aa4.59□□□□□ -1.67
PTCD3-208ENST00000469585 IZUMO1RA6ND01 250 aa4.59□□□□□ -1.67
PTCD3-208ENST00000469585 FAM24AA6NFZ4 105 aa4.59□□□□□ -1.67
PTCD3-208ENST00000469585 PRSS46E5RG02 174 aa4.59□□□□□ -1.67
PTCD3-208ENST00000469585 ISLRO14498 428 aa4.59□□□□□ -1.67
PTCD3-208ENST00000469585 MPC2O95563 127 aa4.59□□□□□ -1.67
PTCD3-208ENST00000469585 GIPP09681 153 aaPredicted RBP4.59□□□□□ -1.67
PTCD3-208ENST00000469585 ZNF688P0C7X2 276 aa4.59□□□□□ -1.67
PTCD3-208ENST00000469585 RPL12P30050 165 aaKnown RBP4.59□□□□□ -1.67
PTCD3-208ENST00000469585 PSMB3P49720 205 aa4.59□□□□□ -1.67
PTCD3-208ENST00000469585 PAX9P55771 341 aa4.59□□□□□ -1.67
PTCD3-208ENST00000469585 DEFB131AP59861 70 aa4.59□□□□□ -1.67
PTCD3-208ENST00000469585 IFITM3Q01628 133 aa4.59□□□□□ -1.67
PTCD3-208ENST00000469585 EWSR1Q01844 656 aaKnown RBP eCLIP4.59□□□□□ -1.67
PTCD3-208ENST00000469585 SRSF9Q13242 221 aaKnown RBP eCLIP4.59□□□□□ -1.67
PTCD3-208ENST00000469585 USF2Q15853 346 aaPredicted RBP4.59□□□□□ -1.67
PTCD3-208ENST00000469585 GUK1Q16774 197 aa4.59□□□□□ -1.67
PTCD3-208ENST00000469585 MORN3Q6PF18 240 aaPredicted RBP4.59□□□□□ -1.67
PTCD3-208ENST00000469585 LINC00305Q7Z4B0 112 aa4.59□□□□□ -1.67
PTCD3-208ENST00000469585 KIR2DL5AQ8N109 375 aa4.59□□□□□ -1.67
PTCD3-208ENST00000469585 NHLRC2Q8NBF2 726 aa4.59□□□□□ -1.67
PTCD3-208ENST00000469585 KIR2DL5BQ8NHK3 375 aa4.59□□□□□ -1.67
PTCD3-208ENST00000469585 RCHY1Q96PM5 261 aa4.59□□□□□ -1.67
PTCD3-208ENST00000469585 ATP5SQ99766 215 aa4.59□□□□□ -1.67
PTCD3-208ENST00000469585 ARV1Q9H2C2 271 aa4.59□□□□□ -1.67
PTCD3-208ENST00000469585 MBD2Q9UBB5 411 aa4.59□□□□□ -1.67
PTCD3-208ENST00000469585 SELENOKQ9Y6D0 94 aa4.59□□□□□ -1.67
PTCD3-208ENST00000469585 FXYD6-FXYD2A0A087WZ82 144 aa4.58□□□□□ -1.68
PTCD3-208ENST00000469585 ZNF98A6NK75 572 aa4.58□□□□□ -1.68
PTCD3-208ENST00000469585 CCNKO75909 580 aa4.58□□□□□ -1.68
PTCD3-208ENST00000469585 DUSP14O95147 198 aaKnown RBP4.58□□□□□ -1.68
PTCD3-208ENST00000469585 CA1P00915 261 aaPredicted RBP4.58□□□□□ -1.68
PTCD3-208ENST00000469585 MBP02144 154 aa4.58□□□□□ -1.68
PTCD3-208ENST00000469585 RPL35AP18077 110 aaKnown RBP4.58□□□□□ -1.68
PTCD3-208ENST00000469585 CXCL2P19875 107 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms