RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 RCL1Q9Y2P8 373 aaKnown RBP8.45□□□□□ -1.06
HDAC3-204ENST00000469207 C7orf66A4D0T2 115 aa8.44□□□□□ -1.06
HDAC3-204ENST00000469207 K7EPK0 472 aa8.44□□□□□ -1.06
HDAC3-204ENST00000469207 IGLC2P0DOY2 106 aa8.44□□□□□ -1.06
HDAC3-204ENST00000469207 ERCC8Q13216 396 aa8.44□□□□□ -1.06
HDAC3-204ENST00000469207 IAH1Q2TAA2 248 aaPredicted RBP8.44□□□□□ -1.06
HDAC3-204ENST00000469207 BPIFA4PQ86YQ2 179 aa8.44□□□□□ -1.06
HDAC3-204ENST00000469207 SLC50A1Q9BRV3 221 aa8.44□□□□□ -1.06
HDAC3-204ENST00000469207 SRRQ9GZT4 340 aa8.44□□□□□ -1.06
HDAC3-204ENST00000469207 A0A096LPF7 62 aa8.43□□□□□ -1.06
HDAC3-204ENST00000469207 SNURFLB1AK76 121 aa8.43□□□□□ -1.06
HDAC3-204ENST00000469207 COX7A2P2O60397 106 aa8.43□□□□□ -1.06
HDAC3-204ENST00000469207 NDUFB6O95139 128 aa8.43□□□□□ -1.06
HDAC3-204ENST00000469207 MBPP02686 304 aaPredicted RBP8.43□□□□□ -1.06
HDAC3-204ENST00000469207 S100A5P33763 92 aa8.43□□□□□ -1.06
HDAC3-204ENST00000469207 C10orf113Q5VZT2 155 aa8.43□□□□□ -1.06
HDAC3-204ENST00000469207 MIC13Q5XKP0 118 aa8.43□□□□□ -1.06
HDAC3-204ENST00000469207 Q6ZQT7 251 aa8.43□□□□□ -1.06
HDAC3-204ENST00000469207 C20orf144Q9BQM9 153 aa8.43□□□□□ -1.06
HDAC3-204ENST00000469207 UPK3BQ9BT76 320 aa8.43□□□□□ -1.06
HDAC3-204ENST00000469207 GSN-AS1Q9NRJ2 163 aa8.43□□□□□ -1.06
HDAC3-204ENST00000469207 MRPS16Q9Y3D3 137 aaKnown RBP8.43□□□□□ -1.06
HDAC3-204ENST00000469207 CCDC160A6NGH7 325 aa8.42□□□□□ -1.06
HDAC3-204ENST00000469207 FNDC10F2Z333 226 aa8.42□□□□□ -1.06
HDAC3-204ENST00000469207 M0R3E3 92 aa8.42□□□□□ -1.06
HDAC3-204ENST00000469207 CCSO14618 274 aa8.42□□□□□ -1.06
HDAC3-204ENST00000469207 TSC22D2O75157 780 aa8.42□□□□□ -1.06
HDAC3-204ENST00000469207 CXCL2P19875 107 aa8.42□□□□□ -1.06
HDAC3-204ENST00000469207 BTCP35070 178 aa8.42□□□□□ -1.06
HDAC3-204ENST00000469207 LINC00315P59091 139 aa8.42□□□□□ -1.06
HDAC3-204ENST00000469207 CD300CQ08708 224 aa8.42□□□□□ -1.06
HDAC3-204ENST00000469207 C4orf46Q504U0 113 aa8.42□□□□□ -1.06
HDAC3-204ENST00000469207 TTC32Q5I0X7 151 aa8.42□□□□□ -1.06
HDAC3-204ENST00000469207 ZNF546Q86UE3 836 aa8.42□□□□□ -1.06
HDAC3-204ENST00000469207 DEDD2Q8WXF8 326 aa8.42□□□□□ -1.06
HDAC3-204ENST00000469207 ZNF503Q96F45 646 aa8.42□□□□□ -1.06
HDAC3-204ENST00000469207 SDHCQ99643 169 aaPredicted RBP8.42□□□□□ -1.06
HDAC3-204ENST00000469207 DNAJC4Q9NNZ3 241 aa8.42□□□□□ -1.06
HDAC3-204ENST00000469207 KLF12Q9Y4X4 402 aa8.42□□□□□ -1.06
HDAC3-204ENST00000469207 FAM24AA6NFZ4 105 aa8.41□□□□□ -1.06
HDAC3-204ENST00000469207 NPIPB6E9PJ23 425 aa8.41□□□□□ -1.06
HDAC3-204ENST00000469207 BTF3P20290 206 aaKnown RBP8.41□□□□□ -1.06
HDAC3-204ENST00000469207 CAMLGP49069 296 aa8.41□□□□□ -1.06
HDAC3-204ENST00000469207 TAS2R30P59541 319 aa8.41□□□□□ -1.06
HDAC3-204ENST00000469207 PXDC1Q5TGL8 231 aa8.41□□□□□ -1.06
HDAC3-204ENST00000469207 Q6ZRN7 208 aaPredicted RBP8.41□□□□□ -1.06
HDAC3-204ENST00000469207 NRARPQ7Z6K4 114 aa8.41□□□□□ -1.06
HDAC3-204ENST00000469207 S100A7AQ86SG5 101 aa8.41□□□□□ -1.06
HDAC3-204ENST00000469207 C11orf72Q8NBR9 251 aa8.41□□□□□ -1.06
HDAC3-204ENST00000469207 TRGV2A0A075B6R0 118 aa8.4□□□□□ -1.06
HDAC3-204ENST00000469207 A0A1W2PPQ1 181 aa8.4□□□□□ -1.06
HDAC3-204ENST00000469207 H3BNG1 76 aa8.4□□□□□ -1.06
HDAC3-204ENST00000469207 ZNF324O75467 553 aaPredicted RBP8.4□□□□□ -1.06
HDAC3-204ENST00000469207 CST7O76096 145 aa8.4□□□□□ -1.06
HDAC3-204ENST00000469207 IGHV3-53P01767 116 aa8.4□□□□□ -1.06
HDAC3-204ENST00000469207 LEPP41159 167 aa8.4□□□□□ -1.06
HDAC3-204ENST00000469207 INPP1P49441 399 aa8.4□□□□□ -1.06
HDAC3-204ENST00000469207 DAZ2Q13117 558 aaKnown RBP8.4□□□□□ -1.06
HDAC3-204ENST00000469207 BTN1A1Q13410 526 aa8.4□□□□□ -1.06
HDAC3-204ENST00000469207 PYGO2Q9BRQ0 406 aa8.4□□□□□ -1.06
HDAC3-204ENST00000469207 AGPAT4-IT1Q9H0P7 198 aa8.4□□□□□ -1.06
HDAC3-204ENST00000469207 TP53TG3Q9ULZ0 132 aa8.4□□□□□ -1.06
HDAC3-204ENST00000469207 LSM5Q9Y4Y9 91 aaKnown RBP8.4□□□□□ -1.06
HDAC3-204ENST00000469207 PXMP4Q9Y6I8 212 aa8.4□□□□□ -1.06
HDAC3-204ENST00000469207 TRGV1A0A0A0MS02 117 aa8.39□□□□□ -1.07
HDAC3-204ENST00000469207 NAP1L6A6NFF2 107 aa8.39□□□□□ -1.07
HDAC3-204ENST00000469207 RNASE4P34096 147 aaKnown RBP8.39□□□□□ -1.07
HDAC3-204ENST00000469207 BCAP31P51572 246 aa8.39□□□□□ -1.07
HDAC3-204ENST00000469207 XGP55808 180 aa8.39□□□□□ -1.07
HDAC3-204ENST00000469207 Q6ZRG5 221 aa8.39□□□□□ -1.07
HDAC3-204ENST00000469207 MITD1Q8WV92 249 aa8.39□□□□□ -1.07
HDAC3-204ENST00000469207 GGACTQ9BVM4 153 aa8.39□□□□□ -1.07
HDAC3-204ENST00000469207 RNF24Q9Y225 148 aa8.39□□□□□ -1.07
HDAC3-204ENST00000469207 FUT9Q9Y231 359 aa8.39□□□□□ -1.07
HDAC3-204ENST00000469207 C7orf71A4D174 169 aa8.38□□□□□ -1.07
HDAC3-204ENST00000469207 FAM25EA8MYX2 175 aa8.38□□□□□ -1.07
HDAC3-204ENST00000469207 EPM2AB3EWF7 344 aa8.38□□□□□ -1.07
HDAC3-204ENST00000469207 L7N2F9 121 aa8.38□□□□□ -1.07
HDAC3-204ENST00000469207 SIVA1O15304 175 aa8.38□□□□□ -1.07
HDAC3-204ENST00000469207 NDUFB4O95168 129 aa8.38□□□□□ -1.07
HDAC3-204ENST00000469207 PYYP10082 97 aa8.38□□□□□ -1.07
HDAC3-204ENST00000469207 VAMP2P63027 116 aa8.38□□□□□ -1.07
HDAC3-204ENST00000469207 SPANXN2Q5MJ10 180 aa8.38□□□□□ -1.07
HDAC3-204ENST00000469207 PRR9Q5T870 116 aa8.38□□□□□ -1.07
HDAC3-204ENST00000469207 TRIQKQ629K1 86 aa8.38□□□□□ -1.07
HDAC3-204ENST00000469207 EXOC3-AS1Q8N2X6 119 aa8.38□□□□□ -1.07
HDAC3-204ENST00000469207 ODF3Q96PU9 254 aa8.38□□□□□ -1.07
HDAC3-204ENST00000469207 C11orf1Q9H5F2 150 aa8.38□□□□□ -1.07
HDAC3-204ENST00000469207 TRBV19A0A075B6N1 114 aa8.37□□□□□ -1.07
HDAC3-204ENST00000469207 KLLNB2CW77 178 aa8.37□□□□□ -1.07
HDAC3-204ENST00000469207 SPINK4O60575 86 aa8.37□□□□□ -1.07
HDAC3-204ENST00000469207 NXPH4O95158 308 aa8.37□□□□□ -1.07
HDAC3-204ENST00000469207 SLC25A5P05141 298 aaKnown RBP8.37□□□□□ -1.07
HDAC3-204ENST00000469207 DNAH10OSP0CZ25 163 aa8.37□□□□□ -1.07
HDAC3-204ENST00000469207 CAV2P51636 162 aa8.37□□□□□ -1.07
HDAC3-204ENST00000469207 GCSAMLQ5JQS6 135 aa8.37□□□□□ -1.07
HDAC3-204ENST00000469207 EIF4E3Q8N5X7 224 aaKnown RBP8.37□□□□□ -1.07
HDAC3-204ENST00000469207 BLNKQ8WV28 456 aa8.37□□□□□ -1.07
HDAC3-204ENST00000469207 FAM19A4Q96LR4 140 aa8.37□□□□□ -1.07
HDAC3-204ENST00000469207 MRPL16Q9NX20 251 aaKnown RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms