RNA–Protein interactions for RNA: ENST00000468844.1

RPL39-202, Transcript of ribosomal protein L39, humanhuman

TSL 1 (best)

Gene RPL39, Length 1,915 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-202ENST00000468844 CST9LP1Q5W188 147 aa13.18□□□□□ -0.3
RPL39-202ENST00000468844 TMEM61Q8N0U2 210 aa13.18□□□□□ -0.3
RPL39-202ENST00000468844 ISOC2Q96AB3 205 aa13.18□□□□□ -0.3
RPL39-202ENST00000468844 C11orf94C9JXX5 98 aa13.17□□□□□ -0.3
RPL39-202ENST00000468844 CD300EQ496F6 205 aaPredicted RBP13.17□□□□□ -0.3
RPL39-202ENST00000468844 EXOC3-AS1Q8N2X6 119 aa13.17□□□□□ -0.3
RPL39-202ENST00000468844 Q9H3A6 140 aa13.17□□□□□ -0.3
RPL39-202ENST00000468844 ZNF331Q9NQX6 463 aaPredicted RBP13.17□□□□□ -0.3
RPL39-202ENST00000468844 VAX2Q9UIW0 290 aa13.17□□□□□ -0.3
RPL39-202ENST00000468844 DNAH3Q8TD57 4116 aa13.17□□□□□ -0.3
RPL39-202ENST00000468844 NOTCH1P46531 2555 aa13.17□□□□□ -0.3
RPL39-202ENST00000468844 SOCS3O14543 225 aa13.17□□□□□ -0.3
RPL39-202ENST00000468844 ZNF253O75346 499 aa13.17□□□□□ -0.3
RPL39-202ENST00000468844 MEOX2P50222 304 aa13.17□□□□□ -0.3
RPL39-202ENST00000468844 CD81P60033 236 aa13.17□□□□□ -0.3
RPL39-202ENST00000468844 IGFL4Q6B9Z1 124 aa13.17□□□□□ -0.3
RPL39-202ENST00000468844 GBGT1Q8N5D6 347 aa13.17□□□□□ -0.3
RPL39-202ENST00000468844 DCANP1Q8TF63 244 aa13.17□□□□□ -0.3
RPL39-202ENST00000468844 MS4A6AQ9H2W1 248 aa13.17□□□□□ -0.3
RPL39-202ENST00000468844 SUMO1P63165 101 aaKnown RBP13.16□□□□□ -0.3
RPL39-202ENST00000468844 MGAM2Q2M2H8 2515 aa13.16□□□□□ -0.3
RPL39-202ENST00000468844 TRAV8-2A0A0B4J237 113 aa13.15□□□□□ -0.3
RPL39-202ENST00000468844 RAB5AP20339 215 aa13.15□□□□□ -0.3
RPL39-202ENST00000468844 TAGLN2P37802 199 aaKnown RBP13.15□□□□□ -0.3
RPL39-202ENST00000468844 RIPPLY3P57055 190 aa13.15□□□□□ -0.3
RPL39-202ENST00000468844 LYPD1Q8N2G4 141 aa13.15□□□□□ -0.3
RPL39-202ENST00000468844 IZUMO1RA6ND01 250 aa13.15□□□□□ -0.3
RPL39-202ENST00000468844 IGLV1-51P01701 117 aa13.15□□□□□ -0.3
RPL39-202ENST00000468844 HLA-DMBP28068 263 aa13.15□□□□□ -0.3
RPL39-202ENST00000468844 PSG9Q00887 426 aa13.15□□□□□ -0.3
RPL39-202ENST00000468844 RBPMS2Q6ZRY4 209 aaKnown RBP13.15□□□□□ -0.3
RPL39-202ENST00000468844 FAM24BQ8N5W8 94 aa13.15□□□□□ -0.3
RPL39-202ENST00000468844 WFDC9Q8NEX5 89 aa13.15□□□□□ -0.3
RPL39-202ENST00000468844 SLC50A1Q9BRV3 221 aa13.15□□□□□ -0.3
RPL39-202ENST00000468844 PGPA6NDG6 321 aa13.14□□□□□ -0.31
RPL39-202ENST00000468844 M0R3E3 92 aa13.14□□□□□ -0.31
RPL39-202ENST00000468844 CD33P20138 364 aa13.14□□□□□ -0.31
RPL39-202ENST00000468844 SNRPEP62304 92 aaKnown RBP13.14□□□□□ -0.31
RPL39-202ENST00000468844 RNF182Q8N6D2 247 aa13.14□□□□□ -0.31
RPL39-202ENST00000468844 C16orf92Q96LL3 132 aa13.14□□□□□ -0.31
RPL39-202ENST00000468844 TXNDC17Q9BRA2 123 aa13.14□□□□□ -0.31
RPL39-202ENST00000468844 OTORQ9NRC9 128 aa13.14□□□□□ -0.31
RPL39-202ENST00000468844 C5orf52A6NGY3 159 aa13.13□□□□□ -0.31
RPL39-202ENST00000468844 TFPI2P48307 235 aa13.13□□□□□ -0.31
RPL39-202ENST00000468844 AAMDCQ9H7C9 122 aa13.13□□□□□ -0.31
RPL39-202ENST00000468844 PRB4P10163 310 aaPredicted RBP13.13□□□□□ -0.31
RPL39-202ENST00000468844 WFDC3Q8IUB2 231 aa13.13□□□□□ -0.31
RPL39-202ENST00000468844 CYB561D1Q8N8Q1 229 aa13.13□□□□□ -0.31
RPL39-202ENST00000468844 YPEL4Q96NS1 127 aa13.13□□□□□ -0.31
RPL39-202ENST00000468844 C12orf57Q99622 126 aa13.13□□□□□ -0.31
RPL39-202ENST00000468844 K7EQG2 157 aa13.12□□□□□ -0.31
RPL39-202ENST00000468844 A0A087WWC5 75 aa13.11□□□□□ -0.31
RPL39-202ENST00000468844 ISLRO14498 428 aa13.11□□□□□ -0.31
RPL39-202ENST00000468844 SLC25A5P05141 298 aaKnown RBP13.11□□□□□ -0.31
RPL39-202ENST00000468844 S100A6P06703 90 aa13.11□□□□□ -0.31
RPL39-202ENST00000468844 CEBPGP53567 150 aa13.11□□□□□ -0.31
RPL39-202ENST00000468844 GNG5P63218 68 aa13.11□□□□□ -0.31
RPL39-202ENST00000468844 C5orf17Q8NAS9 161 aa13.11□□□□□ -0.31
RPL39-202ENST00000468844 TRAV25A0A0B4J276 109 aa13.11□□□□□ -0.31
RPL39-202ENST00000468844 SCO2A0A1W2PP80 73 aa13.11□□□□□ -0.31
RPL39-202ENST00000468844 ZNF705FA8MVS1 300 aaPredicted RBP13.11□□□□□ -0.31
RPL39-202ENST00000468844 UBE2CO00762 179 aa13.11□□□□□ -0.31
RPL39-202ENST00000468844 PAFAH1B2P68402 229 aa13.11□□□□□ -0.31
RPL39-202ENST00000468844 TVP23CQ96ET8 276 aa13.11□□□□□ -0.31
RPL39-202ENST00000468844 C20orf173Q96LM9 149 aa13.11□□□□□ -0.31
RPL39-202ENST00000468844 PCP4L1A6NKN8 68 aa13.1□□□□□ -0.31
RPL39-202ENST00000468844 PDE6DO43924 150 aa13.1□□□□□ -0.31
RPL39-202ENST00000468844 INSL3P51460 131 aa13.1□□□□□ -0.31
RPL39-202ENST00000468844 C9orf66Q5T8R8 295 aa13.1□□□□□ -0.31
RPL39-202ENST00000468844 SPAG8Q99932 426 aaPredicted RBP13.1□□□□□ -0.31
RPL39-202ENST00000468844 NIPSNAP3BQ9BS92 247 aa13.1□□□□□ -0.31
RPL39-202ENST00000468844 ZNF256Q9Y2P7 627 aaPredicted RBP13.1□□□□□ -0.31
RPL39-202ENST00000468844 SAMD13Q5VXD3 122 aa13.09□□□□□ -0.31
RPL39-202ENST00000468844 CMTM2Q8TAZ6 248 aa13.09□□□□□ -0.31
RPL39-202ENST00000468844 EPDR1Q9UM22 224 aa13.09□□□□□ -0.31
RPL39-202ENST00000468844 RPH3ALQ9UNE2 315 aa13.09□□□□□ -0.31
RPL39-202ENST00000468844 TRAV2A0A0B4J234 112 aa13.09□□□□□ -0.31
RPL39-202ENST00000468844 TMEM250H0YL14 139 aa13.09□□□□□ -0.31
RPL39-202ENST00000468844 TCRAP04437 139 aa13.09□□□□□ -0.31
RPL39-202ENST00000468844 ZNF688P0C7X2 276 aa13.09□□□□□ -0.31
RPL39-202ENST00000468844 IGLL1P15814 213 aa13.09□□□□□ -0.31
RPL39-202ENST00000468844 PSG3Q16557 428 aa13.09□□□□□ -0.31
RPL39-202ENST00000468844 OR2K2Q8NGT1 345 aa13.09□□□□□ -0.31
RPL39-202ENST00000468844 C11orf52Q96A22 123 aa13.09□□□□□ -0.31
RPL39-202ENST00000468844 DERL1Q9BUN8 251 aa13.09□□□□□ -0.31
RPL39-202ENST00000468844 ZNF727A8MUV8 499 aa13.08□□□□□ -0.32
RPL39-202ENST00000468844 F6UZH7 168 aa13.08□□□□□ -0.32
RPL39-202ENST00000468844 NDUFS6O75380 124 aaKnown RBP13.08□□□□□ -0.32
RPL39-202ENST00000468844 LCN12Q6JVE5 192 aa13.08□□□□□ -0.32
RPL39-202ENST00000468844 TCEAL7Q9BRU2 100 aa13.08□□□□□ -0.32
RPL39-202ENST00000468844 MCRIP2Q9BUT9 160 aaKnown RBP13.08□□□□□ -0.32
RPL39-202ENST00000468844 CLEC5AQ9NY25 188 aa13.08□□□□□ -0.32
RPL39-202ENST00000468844 DIRC3C9JPN6 131 aa13.07□□□□□ -0.32
RPL39-202ENST00000468844 PRAC2D3DTV9 90 aa13.07□□□□□ -0.32
RPL39-202ENST00000468844 PEX7O00628 323 aa13.07□□□□□ -0.32
RPL39-202ENST00000468844 ID1P41134 155 aa13.07□□□□□ -0.32
RPL39-202ENST00000468844 ATG101Q9BSB4 218 aa13.07□□□□□ -0.32
RPL39-202ENST00000468844 CXorf65A6NEN9 183 aa13.07□□□□□ -0.32
RPL39-202ENST00000468844 OR4C46A6NHA9 309 aa13.07□□□□□ -0.32
RPL39-202ENST00000468844 DEFB1P60022 68 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms