RNA–Protein interactions for RNA: ENST00000467216.2

COL21A1-207, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 5

Gene COL21A1, Length 277 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-207ENST00000467216 SMIM3Q9BZL3 60 aa9.66□□□□□ -0.86
COL21A1-207ENST00000467216 X6R8D5 127 aa9.66□□□□□ -0.86
COL21A1-207ENST00000467216 IGLV2-18A0A075B6J9 118 aa9.65□□□□□ -0.86
COL21A1-207ENST00000467216 PIGBOS1A0A0B4J2F0 54 aa9.65□□□□□ -0.86
COL21A1-207ENST00000467216 GIG44P09565 113 aaPredicted RBP9.65□□□□□ -0.86
COL21A1-207ENST00000467216 ATP6V0CP27449 155 aa9.65□□□□□ -0.86
COL21A1-207ENST00000467216 PRCDQ00LT1 54 aa9.65□□□□□ -0.86
COL21A1-207ENST00000467216 CCDC71LQ8N9Z2 235 aa9.65□□□□□ -0.86
COL21A1-207ENST00000467216 FAM213BQ8TBF2 198 aa9.65□□□□□ -0.86
COL21A1-207ENST00000467216 FAM210BQ96KR6 192 aa9.65□□□□□ -0.86
COL21A1-207ENST00000467216 HIST1H2BLQ99880 126 aa9.65□□□□□ -0.86
COL21A1-207ENST00000467216 NIPSNAP3BQ9BS92 247 aa9.65□□□□□ -0.86
COL21A1-207ENST00000467216 SH3BGRL3Q9H299 93 aa9.65□□□□□ -0.86
COL21A1-207ENST00000467216 CELA1Q9UNI1 258 aa9.65□□□□□ -0.86
COL21A1-207ENST00000467216 RCL1Q9Y2P8 373 aaKnown RBP9.65□□□□□ -0.86
COL21A1-207ENST00000467216 A0A1B0GU03 582 aa9.64□□□□□ -0.87
COL21A1-207ENST00000467216 SMCO3A2RU48 225 aa9.64□□□□□ -0.87
COL21A1-207ENST00000467216 K7EQG2 157 aa9.64□□□□□ -0.87
COL21A1-207ENST00000467216 TRGC1P0CF51 173 aa9.64□□□□□ -0.87
COL21A1-207ENST00000467216 FHITP49789 147 aa9.64□□□□□ -0.87
COL21A1-207ENST00000467216 SUB1P53999 127 aaKnown RBP eCLIP9.64□□□□□ -0.87
COL21A1-207ENST00000467216 PIGPP57054 158 aa9.64□□□□□ -0.87
COL21A1-207ENST00000467216 NHLH2Q02577 135 aa9.64□□□□□ -0.87
COL21A1-207ENST00000467216 PHLDA2Q53GA4 152 aa9.64□□□□□ -0.87
COL21A1-207ENST00000467216 ZNF575Q86XF7 245 aa9.64□□□□□ -0.87
COL21A1-207ENST00000467216 SLC35G3Q8N808 338 aa9.64□□□□□ -0.87
COL21A1-207ENST00000467216 HSD17B11Q8NBQ5 300 aa9.64□□□□□ -0.87
COL21A1-207ENST00000467216 MBD3L1Q8WWY6 194 aa9.64□□□□□ -0.87
COL21A1-207ENST00000467216 FRZBQ92765 325 aa9.64□□□□□ -0.87
COL21A1-207ENST00000467216 LYRM2Q9NU23 88 aaPredicted RBP9.64□□□□□ -0.87
COL21A1-207ENST00000467216 VAX2Q9UIW0 290 aa9.64□□□□□ -0.87
COL21A1-207ENST00000467216 TMEM56-RWDD3S4R434 201 aa9.64□□□□□ -0.87
COL21A1-207ENST00000467216 HELTA6NFD8 242 aa9.63□□□□□ -0.87
COL21A1-207ENST00000467216 CORTO00230 105 aa9.63□□□□□ -0.87
COL21A1-207ENST00000467216 TRGC2P03986 189 aa9.63□□□□□ -0.87
COL21A1-207ENST00000467216 SPART-AS1P0CW21 52 aa9.63□□□□□ -0.87
COL21A1-207ENST00000467216 HSPE1P61604 102 aaKnown RBP9.63□□□□□ -0.87
COL21A1-207ENST00000467216 SNRPD3P62318 126 aaKnown RBP9.63□□□□□ -0.87
COL21A1-207ENST00000467216 CCL20P78556 96 aa9.63□□□□□ -0.87
COL21A1-207ENST00000467216 PSMG4Q5JS54 123 aa9.63□□□□□ -0.87
COL21A1-207ENST00000467216 C1orf134Q5TEV5 83 aa9.63□□□□□ -0.87
COL21A1-207ENST00000467216 TMEM182Q6ZP80 229 aaPredicted RBP9.63□□□□□ -0.87
COL21A1-207ENST00000467216 OR2G3Q8NGZ4 309 aa9.63□□□□□ -0.87
COL21A1-207ENST00000467216 IL22RA2Q969J5 263 aa9.63□□□□□ -0.87
COL21A1-207ENST00000467216 ACY3Q96HD9 319 aa9.63□□□□□ -0.87
COL21A1-207ENST00000467216 PACRGQ96M98 296 aaPredicted RBP9.63□□□□□ -0.87
COL21A1-207ENST00000467216 PARD6GQ9BYG4 376 aaPredicted RBP9.63□□□□□ -0.87
COL21A1-207ENST00000467216 ZFAND3Q9H8U3 227 aa9.63□□□□□ -0.87
COL21A1-207ENST00000467216 ENY2Q9NPA8 101 aa9.63□□□□□ -0.87
COL21A1-207ENST00000467216 TGIF2-C20orf24A0A0A6YYL0 155 aa9.62□□□□□ -0.87
COL21A1-207ENST00000467216 TMEM189A5PLL7 270 aa9.62□□□□□ -0.87
COL21A1-207ENST00000467216 TMEM50AO95807 157 aa9.62□□□□□ -0.87
COL21A1-207ENST00000467216 SLC25A6P12236 298 aa9.62□□□□□ -0.87
COL21A1-207ENST00000467216 EMP1P54849 157 aa9.62□□□□□ -0.87
COL21A1-207ENST00000467216 TAS2R30P59541 319 aa9.62□□□□□ -0.87
COL21A1-207ENST00000467216 LYZL2Q7Z4W2 148 aa9.62□□□□□ -0.87
COL21A1-207ENST00000467216 TMEM252Q8N6L7 170 aa9.62□□□□□ -0.87
COL21A1-207ENST00000467216 RAB40CQ96S21 281 aa9.62□□□□□ -0.87
COL21A1-207ENST00000467216 XCL2Q9UBD3 114 aa9.62□□□□□ -0.87
COL21A1-207ENST00000467216 PKHD1P08F94 4074 aa9.61□□□□□ -0.87
COL21A1-207ENST00000467216 TEX48A0A1B0GUV7 120 aa9.61□□□□□ -0.87
COL21A1-207ENST00000467216 IGSF23A1L1A6 192 aa9.61□□□□□ -0.87
COL21A1-207ENST00000467216 ZNF727A8MUV8 499 aa9.61□□□□□ -0.87
COL21A1-207ENST00000467216 TCAPO15273 167 aa9.61□□□□□ -0.87
COL21A1-207ENST00000467216 TYMSP04818 313 aa9.61□□□□□ -0.87
COL21A1-207ENST00000467216 GZMBP10144 247 aa9.61□□□□□ -0.87
COL21A1-207ENST00000467216 CRYBB3P26998 211 aa9.61□□□□□ -0.87
COL21A1-207ENST00000467216 OPRK1P41145 380 aa9.61□□□□□ -0.87
COL21A1-207ENST00000467216 ID3Q02535 119 aa9.61□□□□□ -0.87
COL21A1-207ENST00000467216 SPINK9Q5DT21 86 aa9.61□□□□□ -0.87
COL21A1-207ENST00000467216 AKR1C8PQ5T2L2 129 aa9.61□□□□□ -0.87
COL21A1-207ENST00000467216 TBC1D26Q86UD7 250 aa9.61□□□□□ -0.87
COL21A1-207ENST00000467216 CYB561D1Q8N8Q1 229 aa9.61□□□□□ -0.87
COL21A1-207ENST00000467216 PSMG3Q9BT73 122 aaPredicted RBP9.61□□□□□ -0.87
COL21A1-207ENST00000467216 SDF2L1Q9HCN8 221 aa9.61□□□□□ -0.87
COL21A1-207ENST00000467216 C16orf90A8MZG2 172 aa9.6□□□□□ -0.87
COL21A1-207ENST00000467216 PFN1P07737 140 aaKnown RBP9.6□□□□□ -0.87
COL21A1-207ENST00000467216 HTN3P15516 51 aa9.6□□□□□ -0.87
COL21A1-207ENST00000467216 GAGE1Q13065 139 aa9.6□□□□□ -0.87
COL21A1-207ENST00000467216 GFI1BQ5VTD9 330 aa9.6□□□□□ -0.87
COL21A1-207ENST00000467216 Q6ZRM9 215 aa9.6□□□□□ -0.87
COL21A1-207ENST00000467216 CSNK1G2-AS1Q8NCQ2 148 aa9.6□□□□□ -0.87
COL21A1-207ENST00000467216 DCANP1Q8TF63 244 aa9.6□□□□□ -0.87
COL21A1-207ENST00000467216 TMEM222Q9H0R3 208 aa9.6□□□□□ -0.87
COL21A1-207ENST00000467216 IGHV3OR16-12A0A075B7B8 117 aa9.59□□□□□ -0.87
COL21A1-207ENST00000467216 TRAV30A0A087WSZ9 112 aa9.59□□□□□ -0.87
COL21A1-207ENST00000467216 SCGB1D2O95969 90 aa9.59□□□□□ -0.87
COL21A1-207ENST00000467216 METTL15P1P0C7V9 234 aa9.59□□□□□ -0.87
COL21A1-207ENST00000467216 RD3LP0DJH9 198 aa9.59□□□□□ -0.87
COL21A1-207ENST00000467216 BCL2P10415 239 aa9.59□□□□□ -0.87
COL21A1-207ENST00000467216 FABP4P15090 132 aa9.59□□□□□ -0.87
COL21A1-207ENST00000467216 NKX2-1P43699 371 aaPredicted RBP9.59□□□□□ -0.87
COL21A1-207ENST00000467216 NMSQ5H8A3 153 aa9.59□□□□□ -0.87
COL21A1-207ENST00000467216 ZNF664Q8N3J9 261 aa9.59□□□□□ -0.87
COL21A1-207ENST00000467216 OR4X1Q8NH49 305 aa9.59□□□□□ -0.87
COL21A1-207ENST00000467216 ATP5SQ99766 215 aa9.59□□□□□ -0.87
COL21A1-207ENST00000467216 KRTAP4-5Q9BYR2 181 aa9.59□□□□□ -0.87
COL21A1-207ENST00000467216 SMIM9A6NGZ8 99 aa9.58□□□□□ -0.88
COL21A1-207ENST00000467216 Q6ZR54 194 aa9.58□□□□□ -0.88
COL21A1-207ENST00000467216 CYP2G1PQ6ZSU1 146 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms