RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 C5orf63A6NC05 138 aa7.02□□□□□ -1.29
HPS4-209ENST00000466781 LY6G6FQ5SQ64 297 aa7.02□□□□□ -1.29
HPS4-209ENST00000466781 TRBV6-6A0A0A6YYG2 114 aa7.02□□□□□ -1.29
HPS4-209ENST00000466781 AMN1Q8IY45 258 aa7.02□□□□□ -1.29
HPS4-209ENST00000466781 HEATR5BQ9P2D3 2071 aa7.01□□□□□ -1.29
HPS4-209ENST00000466781 IGKV1-5P01602 117 aa7.01□□□□□ -1.29
HPS4-209ENST00000466781 NTF4P34130 210 aa7.01□□□□□ -1.29
HPS4-209ENST00000466781 CFHR2P36980 270 aa7.01□□□□□ -1.29
HPS4-209ENST00000466781 TMEM256Q8N2U0 113 aa7.01□□□□□ -1.29
HPS4-209ENST00000466781 PRO3102Q9H379 93 aa7.01□□□□□ -1.29
HPS4-209ENST00000466781 LY96Q9Y6Y9 160 aa7.01□□□□□ -1.29
HPS4-209ENST00000466781 PRSS29PA6NIE9 313 aa7.01□□□□□ -1.29
HPS4-209ENST00000466781 H0YIZ8 118 aa7.01□□□□□ -1.29
HPS4-209ENST00000466781 BTCP35070 178 aa7.01□□□□□ -1.29
HPS4-209ENST00000466781 A0A096LPF7 62 aa7.01□□□□□ -1.29
HPS4-209ENST00000466781 hDV102S1A0JD36 115 aa7.01□□□□□ -1.29
HPS4-209ENST00000466781 FNDC10F2Z333 226 aa7.01□□□□□ -1.29
HPS4-209ENST00000466781 ZNRF2Q8NHG8 242 aa7.01□□□□□ -1.29
HPS4-209ENST00000466781 SMIM2Q9BVW6 85 aa7.01□□□□□ -1.29
HPS4-209ENST00000466781 GFRA4Q9GZZ7 299 aa7.01□□□□□ -1.29
HPS4-209ENST00000466781 PNRC2Q9NPJ4 139 aaKnown RBP7.01□□□□□ -1.29
HPS4-209ENST00000466781 J3QRE1 110 aa7.01□□□□□ -1.29
HPS4-209ENST00000466781 C8orf49Q96NF6 230 aa7.01□□□□□ -1.29
HPS4-209ENST00000466781 BRWD1Q9NSI6 2320 aa7.01□□□□□ -1.29
HPS4-209ENST00000466781 C5orf24Q7Z6I8 188 aa7□□□□□ -1.29
HPS4-209ENST00000466781 NDUFAF3Q9BU61 184 aa7□□□□□ -1.29
HPS4-209ENST00000466781 SCRT2Q9NQ03 307 aa7□□□□□ -1.29
HPS4-209ENST00000466781 NDUFA4O00483 81 aa7□□□□□ -1.29
HPS4-209ENST00000466781 HIST1H2BKO60814 126 aa7□□□□□ -1.29
HPS4-209ENST00000466781 HIST1H2BJP06899 126 aa7□□□□□ -1.29
HPS4-209ENST00000466781 HIST1H2BOP23527 126 aa7□□□□□ -1.29
HPS4-209ENST00000466781 HIST1H2BBP33778 126 aa7□□□□□ -1.29
HPS4-209ENST00000466781 HIST1H2BDP58876 126 aa7□□□□□ -1.29
HPS4-209ENST00000466781 HIST1H2BCP62807 126 aa7□□□□□ -1.29
HPS4-209ENST00000466781 HIST2H2BEQ16778 126 aa7□□□□□ -1.29
HPS4-209ENST00000466781 HIST2H2BFQ5QNW6 126 aaPredicted RBP7□□□□□ -1.29
HPS4-209ENST00000466781 TMEM14EPQ6UXP3 125 aa7□□□□□ -1.29
HPS4-209ENST00000466781 HIST1H2BHQ93079 126 aa7□□□□□ -1.29
HPS4-209ENST00000466781 HIST1H2BNQ99877 126 aa7□□□□□ -1.29
HPS4-209ENST00000466781 HIST1H2BMQ99879 126 aa7□□□□□ -1.29
HPS4-209ENST00000466781 KNTC1P50748 2209 aa7□□□□□ -1.29
HPS4-209ENST00000466781 IGKV2D-24A0A075B6R9 120 aa7□□□□□ -1.29
HPS4-209ENST00000466781 FANCMQ8IYD8 2048 aa7□□□□□ -1.29
HPS4-209ENST00000466781 IGHV3-38A0A0C4DH36 116 aa7□□□□□ -1.29
HPS4-209ENST00000466781 ANGP03950 147 aaKnown RBP7□□□□□ -1.29
HPS4-209ENST00000466781 HGFACQ04756 655 aa7□□□□□ -1.29
HPS4-209ENST00000466781 TSSC4Q9Y5U2 329 aaPredicted RBP7□□□□□ -1.29
HPS4-209ENST00000466781 IGKV1OR2-108A0A075B7D4 117 aa7□□□□□ -1.29
HPS4-209ENST00000466781 LINC01551Q86U37 167 aa7□□□□□ -1.29
HPS4-209ENST00000466781 GFI1Q99684 422 aa7□□□□□ -1.29
HPS4-209ENST00000466781 NXPH4O95158 308 aa6.99□□□□□ -1.29
HPS4-209ENST00000466781 PFN1P07737 140 aaKnown RBP6.99□□□□□ -1.29
HPS4-209ENST00000466781 CDKN1BP46527 198 aa6.99□□□□□ -1.29
HPS4-209ENST00000466781 HS3ST6Q96QI5 342 aa6.99□□□□□ -1.29
HPS4-209ENST00000466781 DSCR8Q96T75 97 aa6.99□□□□□ -1.29
HPS4-209ENST00000466781 NAA38Q9BRA0 125 aaKnown RBP6.99□□□□□ -1.29
HPS4-209ENST00000466781 CT83Q5H943 113 aa6.99□□□□□ -1.29
HPS4-209ENST00000466781 REG4Q9BYZ8 158 aa6.99□□□□□ -1.29
HPS4-209ENST00000466781 TRAV12-2A0A075B6T6 113 aa6.99□□□□□ -1.29
HPS4-209ENST00000466781 A0A1W2PPI3 338 aa6.99□□□□□ -1.29
HPS4-209ENST00000466781 CRLF1O75462 422 aa6.99□□□□□ -1.29
HPS4-209ENST00000466781 A0A1B0GW64 132 aa6.99□□□□□ -1.29
HPS4-209ENST00000466781 C9JAW5 83 aa6.99□□□□□ -1.29
HPS4-209ENST00000466781 FGF16O43320 207 aa6.99□□□□□ -1.29
HPS4-209ENST00000466781 SLAQ13239 276 aa6.99□□□□□ -1.29
HPS4-209ENST00000466781 RPP25LQ8N5L8 163 aaKnown RBP6.99□□□□□ -1.29
HPS4-209ENST00000466781 TRAV1-1A0A0B4J248 108 aa6.99□□□□□ -1.29
HPS4-209ENST00000466781 C15orf62A8K5M9 175 aa6.99□□□□□ -1.29
HPS4-209ENST00000466781 YPEL3P61236 119 aaPredicted RBP6.99□□□□□ -1.29
HPS4-209ENST00000466781 A0A087X0K7 114 aa6.98□□□□□ -1.29
HPS4-209ENST00000466781 G3V318 75 aa6.98□□□□□ -1.29
HPS4-209ENST00000466781 CLPSL2Q6UWE3 100 aa6.98□□□□□ -1.29
HPS4-209ENST00000466781 C8orf86Q6ZUL3 223 aa6.98□□□□□ -1.29
HPS4-209ENST00000466781 Q8TCH9 128 aa6.98□□□□□ -1.29
HPS4-209ENST00000466781 ICE1Q9Y2F5 2266 aa6.98□□□□□ -1.29
HPS4-209ENST00000466781 RALGAPA1Q6GYQ0 2036 aa6.98□□□□□ -1.29
HPS4-209ENST00000466781 TEX48A0A1B0GUV7 120 aa6.98□□□□□ -1.29
HPS4-209ENST00000466781 SYS1-DBNDD2H3BUS1 97 aa6.98□□□□□ -1.29
HPS4-209ENST00000466781 ZC2HC1BQ5TFG8 222 aa6.98□□□□□ -1.29
HPS4-209ENST00000466781 LHFPL1Q86WI0 220 aa6.98□□□□□ -1.29
HPS4-209ENST00000466781 IGHV1-24A0A0C4DH33 117 aa6.98□□□□□ -1.29
HPS4-209ENST00000466781 IGKV1-16P04430 117 aa6.98□□□□□ -1.29
HPS4-209ENST00000466781 ATRAIDQ6UW56 229 aa6.98□□□□□ -1.29
HPS4-209ENST00000466781 CXCL1P09341 107 aa6.98□□□□□ -1.29
HPS4-209ENST00000466781 HLA-DRB4P13762 266 aa6.98□□□□□ -1.29
HPS4-209ENST00000466781 C1orf194Q5T5A4 169 aa6.98□□□□□ -1.29
HPS4-209ENST00000466781 RNF144BQ7Z419 303 aa6.98□□□□□ -1.29
HPS4-209ENST00000466781 MRPL27Q9P0M9 148 aaKnown RBP6.98□□□□□ -1.29
HPS4-209ENST00000466781 HLA-DRB4X5D2U9 266 aa6.98□□□□□ -1.29
HPS4-209ENST00000466781 C9orf66Q5T8R8 295 aa6.98□□□□□ -1.29
HPS4-209ENST00000466781 HIST1H2BLQ99880 126 aa6.98□□□□□ -1.29
HPS4-209ENST00000466781 C2orf16Q68DN1 1984 aa6.97□□□□□ -1.29
HPS4-209ENST00000466781 TRIOBPQ9H2D6 2365 aa6.97□□□□□ -1.29
HPS4-209ENST00000466781 PRSS46E5RG02 174 aa6.97□□□□□ -1.29
HPS4-209ENST00000466781 LINC00205P59089 165 aa6.97□□□□□ -1.29
HPS4-209ENST00000466781 UBL5Q9BZL1 73 aa6.97□□□□□ -1.29
HPS4-209ENST00000466781 TRBV24-1A0A075B6N3 115 aa6.97□□□□□ -1.29
HPS4-209ENST00000466781 KIR3DS1Q14943 382 aa6.97□□□□□ -1.29
HPS4-209ENST00000466781 ZNF362Q5T0B9 420 aaPredicted RBP6.97□□□□□ -1.29
HPS4-209ENST00000466781 ARTNQ5T4W7 220 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms