RNA–Protein interactions for RNA: ENST00000466579.1

SDCCAG3-208, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best)

Gene SDCCAG3, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-208ENST00000466579 IGHV4-28A0A0C4DH34 117 aa6.84□□□□□ -1.31
SDCCAG3-208ENST00000466579 SMIM9A6NGZ8 99 aa6.84□□□□□ -1.31
SDCCAG3-208ENST00000466579 HMSDA8MTL9 139 aa6.84□□□□□ -1.31
SDCCAG3-208ENST00000466579 PRAC2D3DTV9 90 aa6.84□□□□□ -1.31
SDCCAG3-208ENST00000466579 BOLA2-SMG1P6H3BVE0 249 aa6.84□□□□□ -1.31
SDCCAG3-208ENST00000466579 TAAR5O14804 337 aa6.84□□□□□ -1.31
SDCCAG3-208ENST00000466579 NBEAP1P0C6P0 100 aa6.84□□□□□ -1.31
SDCCAG3-208ENST00000466579 RBMY1A1P0DJD3 496 aaKnown RBP6.84□□□□□ -1.31
SDCCAG3-208ENST00000466579 RBMY1CP0DJD4 496 aa6.84□□□□□ -1.31
SDCCAG3-208ENST00000466579 TAS2R45P59539 299 aa6.84□□□□□ -1.31
SDCCAG3-208ENST00000466579 ZNF345Q14585 488 aa6.84□□□□□ -1.31
SDCCAG3-208ENST00000466579 RBMY1FQ15415 496 aaKnown RBP6.84□□□□□ -1.31
SDCCAG3-208ENST00000466579 KHDC3LQ587J8 217 aa6.84□□□□□ -1.31
SDCCAG3-208ENST00000466579 C1orf158Q8N1D5 194 aa6.84□□□□□ -1.31
SDCCAG3-208ENST00000466579 LYPD1Q8N2G4 141 aa6.84□□□□□ -1.31
SDCCAG3-208ENST00000466579 RNF141Q8WVD5 230 aa6.84□□□□□ -1.31
SDCCAG3-208ENST00000466579 GNPNAT1Q96EK6 184 aaPredicted RBP6.84□□□□□ -1.31
SDCCAG3-208ENST00000466579 CYTL1Q9NRR1 136 aa6.84□□□□□ -1.31
SDCCAG3-208ENST00000466579 BORCS7-ASMTA0A0B4J1R7 106 aa6.83□□□□□ -1.32
SDCCAG3-208ENST00000466579 NPIPB6E9PJ23 425 aa6.83□□□□□ -1.32
SDCCAG3-208ENST00000466579 SMLR1H3BR10 107 aa6.83□□□□□ -1.32
SDCCAG3-208ENST00000466579 JTBO76095 146 aa6.83□□□□□ -1.32
SDCCAG3-208ENST00000466579 MBP02144 154 aa6.83□□□□□ -1.32
SDCCAG3-208ENST00000466579 FXYD7P58549 80 aa6.83□□□□□ -1.32
SDCCAG3-208ENST00000466579 RAB2AP61019 212 aa6.83□□□□□ -1.32
SDCCAG3-208ENST00000466579 HIST1H1AQ02539 215 aaPredicted RBP6.83□□□□□ -1.32
SDCCAG3-208ENST00000466579 RPL7L1Q6DKI1 246 aaKnown RBP6.83□□□□□ -1.32
SDCCAG3-208ENST00000466579 PQLC2Q6ZP29 291 aa6.83□□□□□ -1.32
SDCCAG3-208ENST00000466579 KCNRGQ8N5I3 272 aa6.83□□□□□ -1.32
SDCCAG3-208ENST00000466579 RPP25LQ8N5L8 163 aaKnown RBP6.83□□□□□ -1.32
SDCCAG3-208ENST00000466579 HSD17B11Q8NBQ5 300 aa6.83□□□□□ -1.32
SDCCAG3-208ENST00000466579 OR11H4Q8NGC9 324 aa6.83□□□□□ -1.32
SDCCAG3-208ENST00000466579 OR10G4Q8NGN3 311 aa6.83□□□□□ -1.32
SDCCAG3-208ENST00000466579 OR10G9Q8NGN4 311 aa6.83□□□□□ -1.32
SDCCAG3-208ENST00000466579 OR10G7Q8NGN6 311 aa6.83□□□□□ -1.32
SDCCAG3-208ENST00000466579 SUN5Q8TC36 379 aa6.83□□□□□ -1.32
SDCCAG3-208ENST00000466579 DNAH1Q9P2D7 4330 aa6.83□□□□□ -1.32
SDCCAG3-208ENST00000466579 M0R3E3 92 aa6.82□□□□□ -1.32
SDCCAG3-208ENST00000466579 ARPC5O15511 151 aa6.82□□□□□ -1.32
SDCCAG3-208ENST00000466579 OR7C2O60412 319 aa6.82□□□□□ -1.32
SDCCAG3-208ENST00000466579 OR10J4P0C629 311 aa6.82□□□□□ -1.32
SDCCAG3-208ENST00000466579 STAG3L2P0CL84 134 aa6.82□□□□□ -1.32
SDCCAG3-208ENST00000466579 STAG3L3P0CL85 134 aa6.82□□□□□ -1.32
SDCCAG3-208ENST00000466579 SPINK13Q1W4C9 94 aa6.82□□□□□ -1.32
SDCCAG3-208ENST00000466579 LCE2CQ5TA81 110 aa6.82□□□□□ -1.32
SDCCAG3-208ENST00000466579 ZFAND6Q6FIF0 208 aa6.82□□□□□ -1.32
SDCCAG3-208ENST00000466579 C9orf47Q6ZRZ4 202 aa6.82□□□□□ -1.32
SDCCAG3-208ENST00000466579 EXOC3-AS1Q8N2X6 119 aa6.82□□□□□ -1.32
SDCCAG3-208ENST00000466579 ARL6IP6Q8N6S5 226 aa6.82□□□□□ -1.32
SDCCAG3-208ENST00000466579 OR10J6PQ8NGY7 276 aa6.82□□□□□ -1.32
SDCCAG3-208ENST00000466579 BLNKQ8WV28 456 aa6.82□□□□□ -1.32
SDCCAG3-208ENST00000466579 PHYHIPLQ96FC7 376 aa6.82□□□□□ -1.32
SDCCAG3-208ENST00000466579 ST6GAL2Q96JF0 529 aa6.82□□□□□ -1.32
SDCCAG3-208ENST00000466579 FAM19A4Q96LR4 140 aa6.82□□□□□ -1.32
SDCCAG3-208ENST00000466579 SH3BGRL3Q9H299 93 aa6.82□□□□□ -1.32
SDCCAG3-208ENST00000466579 GOLT1BQ9Y3E0 138 aa6.82□□□□□ -1.32
SDCCAG3-208ENST00000466579 TENM2Q9NT68 2774 aa6.82□□□□□ -1.32
SDCCAG3-208ENST00000466579 RYR3Q15413 4870 aa6.82□□□□□ -1.32
SDCCAG3-208ENST00000466579 RYR2Q92736 4967 aa6.81□□□□□ -1.32
SDCCAG3-208ENST00000466579 LOC100996750A0A140TA64 210 aa6.81□□□□□ -1.32
SDCCAG3-208ENST00000466579 A0A1W2PPV4 95 aa6.81□□□□□ -1.32
SDCCAG3-208ENST00000466579 M0R2Z0 102 aa6.81□□□□□ -1.32
SDCCAG3-208ENST00000466579 INSP01308 110 aa6.81□□□□□ -1.32
SDCCAG3-208ENST00000466579 CT45A10P0DMU9 189 aa6.81□□□□□ -1.32
SDCCAG3-208ENST00000466579 CDKN1BP46527 198 aa6.81□□□□□ -1.32
SDCCAG3-208ENST00000466579 CDC34P49427 236 aaPredicted RBP6.81□□□□□ -1.32
SDCCAG3-208ENST00000466579 UBE2L3P68036 154 aaKnown RBP6.81□□□□□ -1.32
SDCCAG3-208ENST00000466579 ICAM4Q14773 271 aa6.81□□□□□ -1.32
SDCCAG3-208ENST00000466579 FAM122CQ6P4D5 195 aa6.81□□□□□ -1.32
SDCCAG3-208ENST00000466579 TCTE3Q8IZS6 198 aa6.81□□□□□ -1.32
SDCCAG3-208ENST00000466579 TMEM256Q8N2U0 113 aa6.81□□□□□ -1.32
SDCCAG3-208ENST00000466579 C11orf45Q8TAV5 145 aa6.81□□□□□ -1.32
SDCCAG3-208ENST00000466579 RAB24Q969Q5 203 aa6.81□□□□□ -1.32
SDCCAG3-208ENST00000466579 C20orf144Q9BQM9 153 aa6.81□□□□□ -1.32
SDCCAG3-208ENST00000466579 KRTAP4-6Q9BYQ5 205 aa6.81□□□□□ -1.32
SDCCAG3-208ENST00000466579 AAMDCQ9H7C9 122 aa6.81□□□□□ -1.32
SDCCAG3-208ENST00000466579 ALMS1Q8TCU4 4167 aa6.8□□□□□ -1.32
SDCCAG3-208ENST00000466579 A0A0D9SG52 128 aa6.8□□□□□ -1.32
SDCCAG3-208ENST00000466579 TRBV7-9A0A0J9YWB2 115 aa6.8□□□□□ -1.32
SDCCAG3-208ENST00000466579 TMEM189A5PLL7 270 aa6.8□□□□□ -1.32
SDCCAG3-208ENST00000466579 RBAKDNA6NC62 111 aa6.8□□□□□ -1.32
SDCCAG3-208ENST00000466579 DEFB4AO15263 64 aa6.8□□□□□ -1.32
SDCCAG3-208ENST00000466579 SLC25A5P05141 298 aaKnown RBP6.8□□□□□ -1.32
SDCCAG3-208ENST00000466579 NMBP08949 121 aa6.8□□□□□ -1.32
SDCCAG3-208ENST00000466579 CRISP2P16562 243 aa6.8□□□□□ -1.32
SDCCAG3-208ENST00000466579 TSPOP30536 169 aa6.8□□□□□ -1.32
SDCCAG3-208ENST00000466579 CEMP1Q6PRD7 247 aaPredicted RBP6.8□□□□□ -1.32
SDCCAG3-208ENST00000466579 BAP18Q8IXM2 172 aa6.8□□□□□ -1.32
SDCCAG3-208ENST00000466579 LINC00477Q96M19 166 aa6.8□□□□□ -1.32
SDCCAG3-208ENST00000466579 ARPC5LQ9BPX5 153 aa6.8□□□□□ -1.32
SDCCAG3-208ENST00000466579 AGPAT4-IT1Q9H0P7 198 aa6.8□□□□□ -1.32
SDCCAG3-208ENST00000466579 Q9H3A6 140 aa6.8□□□□□ -1.32
SDCCAG3-208ENST00000466579 OTORQ9NRC9 128 aa6.8□□□□□ -1.32
SDCCAG3-208ENST00000466579 PPP1R14DQ9NXH3 145 aa6.8□□□□□ -1.32
SDCCAG3-208ENST00000466579 TRAV12-2A0A075B6T6 113 aa6.79□□□□□ -1.32
SDCCAG3-208ENST00000466579 NUPR2A6NF83 97 aa6.79□□□□□ -1.32
SDCCAG3-208ENST00000466579 KLLNB2CW77 178 aa6.79□□□□□ -1.32
SDCCAG3-208ENST00000466579 EIF3GO75821 320 aaKnown RBP eCLIP6.79□□□□□ -1.32
SDCCAG3-208ENST00000466579 HBE1P02100 147 aa6.79□□□□□ -1.32
SDCCAG3-208ENST00000466579 ARL14EPLP0DKL9 152 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms