RNA–Protein interactions for RNA: ENST00000466223.1

AGRN-204, Transcript of agrin, humanhuman

TSL 2

Gene AGRN, Length 459 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-204ENST00000466223 RETNQ9HD89 108 aa11.69□□□□□ -0.54
AGRN-204ENST00000466223 SEC11BP0C7V7 166 aa11.68□□□□□ -0.54
AGRN-204ENST00000466223 STAG3L2P0CL84 134 aa11.68□□□□□ -0.54
AGRN-204ENST00000466223 STAG3L3P0CL85 134 aa11.68□□□□□ -0.54
AGRN-204ENST00000466223 RANP62826 216 aaKnown RBP11.68□□□□□ -0.54
AGRN-204ENST00000466223 HIST1H1AQ02539 215 aaPredicted RBP11.68□□□□□ -0.54
AGRN-204ENST00000466223 EIF5AL1Q6IS14 154 aaKnown RBP11.68□□□□□ -0.54
AGRN-204ENST00000466223 BAP18Q8IXM2 172 aa11.68□□□□□ -0.54
AGRN-204ENST00000466223 LYPD1Q8N2G4 141 aa11.68□□□□□ -0.54
AGRN-204ENST00000466223 RNF183Q96D59 192 aa11.68□□□□□ -0.54
AGRN-204ENST00000466223 MRPL53Q96EL3 112 aaKnown RBP11.68□□□□□ -0.54
AGRN-204ENST00000466223 OVOL2Q9BRP0 275 aa11.68□□□□□ -0.54
AGRN-204ENST00000466223 CTXND1A0A1B0GTU2 59 aa11.67□□□□□ -0.54
AGRN-204ENST00000466223 ZNF705FA8MVS1 300 aaPredicted RBP11.67□□□□□ -0.54
AGRN-204ENST00000466223 EIF3GO75821 320 aaKnown RBP eCLIP11.67□□□□□ -0.54
AGRN-204ENST00000466223 NDUFB4O95168 129 aa11.67□□□□□ -0.54
AGRN-204ENST00000466223 CXorf1O96002 111 aa11.67□□□□□ -0.54
AGRN-204ENST00000466223 CNN1P51911 297 aaKnown RBP11.67□□□□□ -0.54
AGRN-204ENST00000466223 ICAM4Q14773 271 aa11.67□□□□□ -0.54
AGRN-204ENST00000466223 FAM74A1Q5RGS3 127 aa11.67□□□□□ -0.54
AGRN-204ENST00000466223 ZNF503Q96F45 646 aa11.67□□□□□ -0.54
AGRN-204ENST00000466223 UMAD1C9J7I0 102 aa11.66□□□□□ -0.54
AGRN-204ENST00000466223 ZNF705DP0CH99 300 aaPredicted RBP11.66□□□□□ -0.54
AGRN-204ENST00000466223 ZNF705BP0CI00 300 aaPredicted RBP11.66□□□□□ -0.54
AGRN-204ENST00000466223 ARL14EPLP0DKL9 152 aa11.66□□□□□ -0.54
AGRN-204ENST00000466223 CSN1S1P47710 185 aa11.66□□□□□ -0.54
AGRN-204ENST00000466223 EXOC3-AS1Q8N2X6 119 aa11.66□□□□□ -0.54
AGRN-204ENST00000466223 TMEM167BQ9NRX6 74 aa11.66□□□□□ -0.54
AGRN-204ENST00000466223 XCL2Q9UBD3 114 aa11.66□□□□□ -0.54
AGRN-204ENST00000466223 COL7A1Q02388 2944 aa11.65□□□□□ -0.54
AGRN-204ENST00000466223 CD300CQ08708 224 aa11.65□□□□□ -0.54
AGRN-204ENST00000466223 SLC51BQ86UW2 128 aa11.65□□□□□ -0.54
AGRN-204ENST00000466223 IQCF2Q8IXL9 164 aa11.65□□□□□ -0.54
AGRN-204ENST00000466223 STOML3Q8TAV4 291 aa11.65□□□□□ -0.54
AGRN-204ENST00000466223 RXFP4Q8TDU9 374 aa11.65□□□□□ -0.54
AGRN-204ENST00000466223 PHYHIPLQ96FC7 376 aa11.65□□□□□ -0.54
AGRN-204ENST00000466223 RARRES2Q99969 163 aa11.65□□□□□ -0.54
AGRN-204ENST00000466223 Q9H3A6 140 aa11.65□□□□□ -0.54
AGRN-204ENST00000466223 PRAC2D3DTV9 90 aa11.64□□□□□ -0.55
AGRN-204ENST00000466223 M0R3E3 92 aa11.64□□□□□ -0.55
AGRN-204ENST00000466223 AMBPP02760 352 aa11.64□□□□□ -0.55
AGRN-204ENST00000466223 GCHFRP30047 84 aa11.64□□□□□ -0.55
AGRN-204ENST00000466223 FXYD7P58549 80 aa11.64□□□□□ -0.55
AGRN-204ENST00000466223 OR11H2Q8NH07 326 aa11.64□□□□□ -0.55
AGRN-204ENST00000466223 CMTM2Q8TAZ6 248 aa11.64□□□□□ -0.55
AGRN-204ENST00000466223 SLC35B3Q9H1N7 401 aa11.64□□□□□ -0.55
AGRN-204ENST00000466223 OTORQ9NRC9 128 aa11.64□□□□□ -0.55
AGRN-204ENST00000466223 NBEAL2Q6ZNJ1 2754 aa11.64□□□□□ -0.55
AGRN-204ENST00000466223 PGPA6NDG6 321 aa11.63□□□□□ -0.55
AGRN-204ENST00000466223 A8MTW9 85 aa11.63□□□□□ -0.55
AGRN-204ENST00000466223 GIG44P09565 113 aaPredicted RBP11.63□□□□□ -0.55
AGRN-204ENST00000466223 C9orf62Q8N4C0 152 aa11.63□□□□□ -0.55
AGRN-204ENST00000466223 TMED6Q8WW62 240 aa11.63□□□□□ -0.55
AGRN-204ENST00000466223 BOLA2-SMG1P6H3BVE0 249 aa11.62□□□□□ -0.55
AGRN-204ENST00000466223 PRB4P10163 310 aaPredicted RBP11.62□□□□□ -0.55
AGRN-204ENST00000466223 TSPOP30536 169 aa11.62□□□□□ -0.55
AGRN-204ENST00000466223 DPPA3Q6W0C5 159 aa11.62□□□□□ -0.55
AGRN-204ENST00000466223 WWC2-AS2Q96NR7 200 aa11.62□□□□□ -0.55
AGRN-204ENST00000466223 MAP1LC3B2A6NCE7 125 aa11.61□□□□□ -0.55
AGRN-204ENST00000466223 RAB5CP51148 216 aa11.61□□□□□ -0.55
AGRN-204ENST00000466223 ZNF726P1Q15940 193 aa11.61□□□□□ -0.55
AGRN-204ENST00000466223 SPINK13Q1W4C9 94 aa11.61□□□□□ -0.55
AGRN-204ENST00000466223 TMEM78Q5T7P6 136 aa11.61□□□□□ -0.55
AGRN-204ENST00000466223 AMTNQ6UX39 209 aa11.61□□□□□ -0.55
AGRN-204ENST00000466223 SSX7Q7RTT5 188 aa11.61□□□□□ -0.55
AGRN-204ENST00000466223 FAM213BQ8TBF2 198 aa11.61□□□□□ -0.55
AGRN-204ENST00000466223 LINC00477Q96M19 166 aa11.61□□□□□ -0.55
AGRN-204ENST00000466223 MAP1LC3BQ9GZQ8 125 aa11.61□□□□□ -0.55
AGRN-204ENST00000466223 GOLT1BQ9Y3E0 138 aa11.61□□□□□ -0.55
AGRN-204ENST00000466223 NPIPB6E9PJ23 425 aa11.6□□□□□ -0.55
AGRN-204ENST00000466223 M0R2Z0 102 aa11.6□□□□□ -0.55
AGRN-204ENST00000466223 CDKN1BP46527 198 aa11.6□□□□□ -0.55
AGRN-204ENST00000466223 ARL6IP6Q8N6S5 226 aa11.6□□□□□ -0.55
AGRN-204ENST00000466223 CSNK1G2-AS1Q8NCQ2 148 aa11.6□□□□□ -0.55
AGRN-204ENST00000466223 SUN5Q8TC36 379 aa11.6□□□□□ -0.55
AGRN-204ENST00000466223 IGF2BP2-AS1Q96M15 143 aa11.6□□□□□ -0.55
AGRN-204ENST00000466223 TMEM208Q9BTX3 173 aa11.6□□□□□ -0.55
AGRN-204ENST00000466223 IGHV3OR16-12A0A075B7B8 117 aa11.59□□□□□ -0.55
AGRN-204ENST00000466223 INSP01308 110 aa11.59□□□□□ -0.55
AGRN-204ENST00000466223 SLC25A5P05141 298 aaKnown RBP11.59□□□□□ -0.55
AGRN-204ENST00000466223 LEPP41159 167 aa11.59□□□□□ -0.55
AGRN-204ENST00000466223 FHITP49789 147 aa11.59□□□□□ -0.55
AGRN-204ENST00000466223 FGF8P55075 233 aaPredicted RBP11.59□□□□□ -0.55
AGRN-204ENST00000466223 SFT2D1Q8WV19 159 aa11.59□□□□□ -0.55
AGRN-204ENST00000466223 RPH3ALQ9UNE2 315 aa11.59□□□□□ -0.55
AGRN-204ENST00000466223 IGKV2-40A0A087WW87 121 aaPredicted RBP11.58□□□□□ -0.56
AGRN-204ENST00000466223 A0A1W2PRE2 83 aa11.58□□□□□ -0.56
AGRN-204ENST00000466223 RBAKDNA6NC62 111 aa11.58□□□□□ -0.56
AGRN-204ENST00000466223 ZNF705EA8MWA4 302 aaPredicted RBP11.58□□□□□ -0.56
AGRN-204ENST00000466223 DIRC3C9JPN6 131 aa11.58□□□□□ -0.56
AGRN-204ENST00000466223 TEX46H3BTG2 121 aa11.58□□□□□ -0.56
AGRN-204ENST00000466223 IGKV2D-40P01614 121 aaPredicted RBP11.58□□□□□ -0.56
AGRN-204ENST00000466223 H2AFB1P0C5Y9 115 aa11.58□□□□□ -0.56
AGRN-204ENST00000466223 MIFP14174 115 aa11.58□□□□□ -0.56
AGRN-204ENST00000466223 ERCC8Q13216 396 aa11.58□□□□□ -0.56
AGRN-204ENST00000466223 C9orf47Q6ZRZ4 202 aa11.58□□□□□ -0.56
AGRN-204ENST00000466223 MBD3L1Q8WWY6 194 aa11.58□□□□□ -0.56
AGRN-204ENST00000466223 ODF3Q96PU9 254 aa11.58□□□□□ -0.56
AGRN-204ENST00000466223 NKX6-2Q9C056 277 aaPredicted RBP11.58□□□□□ -0.56
AGRN-204ENST00000466223 AGPAT4-IT1Q9H0P7 198 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms