RNA–Protein interactions for RNA: ENST00000465627.5

UBA3-208, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-208ENST00000465627 OTORQ9NRC9 128 aa6.66□□□□□ -1.34
UBA3-208ENST00000465627 UFC1Q9Y3C8 167 aa6.66□□□□□ -1.34
UBA3-208ENST00000465627 KLF12Q9Y4X4 402 aa6.66□□□□□ -1.34
UBA3-208ENST00000465627 UBR4Q5T4S7 5183 aa6.65□□□□□ -1.34
UBA3-208ENST00000465627 IGHV3OR16-13A0A075B7E8 117 aa6.65□□□□□ -1.35
UBA3-208ENST00000465627 IGHV3-74A0A0B4J1X5 117 aa6.65□□□□□ -1.35
UBA3-208ENST00000465627 TRAV8-2A0A0B4J237 113 aa6.65□□□□□ -1.35
UBA3-208ENST00000465627 IGHV3-66A0A0C4DH42 116 aa6.65□□□□□ -1.35
UBA3-208ENST00000465627 C2orf70A6NJV1 201 aa6.65□□□□□ -1.35
UBA3-208ENST00000465627 F8W036 122 aa6.65□□□□□ -1.35
UBA3-208ENST00000465627 RANP62826 216 aaKnown RBP6.65□□□□□ -1.35
UBA3-208ENST00000465627 SOHLH1Q5JUK2 328 aa6.65□□□□□ -1.35
UBA3-208ENST00000465627 ATRAIDQ6UW56 229 aa6.65□□□□□ -1.35
UBA3-208ENST00000465627 ARL6IP6Q8N6S5 226 aa6.65□□□□□ -1.35
UBA3-208ENST00000465627 C11orf44Q8N8P7 122 aa6.65□□□□□ -1.35
UBA3-208ENST00000465627 BLNKQ8WV28 456 aa6.65□□□□□ -1.35
UBA3-208ENST00000465627 DLX4Q92988 240 aaPredicted RBP6.65□□□□□ -1.35
UBA3-208ENST00000465627 NARS2Q96I59 477 aaKnown RBP6.65□□□□□ -1.35
UBA3-208ENST00000465627 DUX3Q96PT4 197 aa6.65□□□□□ -1.35
UBA3-208ENST00000465627 RHPN1-AS1Q9BWJ2 59 aa6.65□□□□□ -1.35
UBA3-208ENST00000465627 PARLQ9H300 379 aa6.65□□□□□ -1.35
UBA3-208ENST00000465627 EPDR1Q9UM22 224 aa6.65□□□□□ -1.35
UBA3-208ENST00000465627 ZNF320A2RRD8 509 aa6.64□□□□□ -1.35
UBA3-208ENST00000465627 ZNF785A8K8V0 405 aa6.64□□□□□ -1.35
UBA3-208ENST00000465627 CCL24O00175 119 aa6.64□□□□□ -1.35
UBA3-208ENST00000465627 IGLV2-11P01706 119 aa6.64□□□□□ -1.35
UBA3-208ENST00000465627 CBLN1P23435 193 aa6.64□□□□□ -1.35
UBA3-208ENST00000465627 FOXL1Q12952 345 aa6.64□□□□□ -1.35
UBA3-208ENST00000465627 FAM74A3Q4VXF1 159 aa6.64□□□□□ -1.35
UBA3-208ENST00000465627 AWAT1Q58HT5 328 aa6.64□□□□□ -1.35
UBA3-208ENST00000465627 NDUFA11Q86Y39 141 aa6.64□□□□□ -1.35
UBA3-208ENST00000465627 EXOC3-AS1Q8N2X6 119 aa6.64□□□□□ -1.35
UBA3-208ENST00000465627 C5orf17Q8NAS9 161 aa6.64□□□□□ -1.35
UBA3-208ENST00000465627 IGF2BP2-AS1Q96M15 143 aa6.64□□□□□ -1.35
UBA3-208ENST00000465627 CITED1Q99966 193 aa6.64□□□□□ -1.35
UBA3-208ENST00000465627 TRBV6-1A0A0K0K1D8 114 aa6.63□□□□□ -1.35
UBA3-208ENST00000465627 A0A1W2PS18 150 aa6.63□□□□□ -1.35
UBA3-208ENST00000465627 PGPA6NDG6 321 aa6.63□□□□□ -1.35
UBA3-208ENST00000465627 M0R3E3 92 aa6.63□□□□□ -1.35
UBA3-208ENST00000465627 PEX7O00628 323 aa6.63□□□□□ -1.35
UBA3-208ENST00000465627 IGLV2-8P01709 118 aa6.63□□□□□ -1.35
UBA3-208ENST00000465627 TCRAP04437 139 aa6.63□□□□□ -1.35
UBA3-208ENST00000465627 CSN3P07498 182 aa6.63□□□□□ -1.35
UBA3-208ENST00000465627 GALR1P47211 349 aa6.63□□□□□ -1.35
UBA3-208ENST00000465627 MEOX2P50222 304 aa6.63□□□□□ -1.35
UBA3-208ENST00000465627 OR9G4Q8NGQ1 327 aa6.63□□□□□ -1.35
UBA3-208ENST00000465627 DCANP1Q8TF63 244 aa6.63□□□□□ -1.35
UBA3-208ENST00000465627 HIST1H2BAQ96A08 127 aa6.63□□□□□ -1.35
UBA3-208ENST00000465627 ZNF747Q9BV97 191 aa6.63□□□□□ -1.35
UBA3-208ENST00000465627 SDF2L1Q9HCN8 221 aa6.63□□□□□ -1.35
UBA3-208ENST00000465627 SIGLEC8Q9NYZ4 499 aa6.63□□□□□ -1.35
UBA3-208ENST00000465627 MLXQ9UH92 298 aa6.63□□□□□ -1.35
UBA3-208ENST00000465627 C9JCJ5 164 aa6.62□□□□□ -1.35
UBA3-208ENST00000465627 APOC3P02656 99 aa6.62□□□□□ -1.35
UBA3-208ENST00000465627 FOLR2P14207 255 aa6.62□□□□□ -1.35
UBA3-208ENST00000465627 HLA-DMBP28068 263 aa6.62□□□□□ -1.35
UBA3-208ENST00000465627 RPL35P42766 123 aaKnown RBP6.62□□□□□ -1.35
UBA3-208ENST00000465627 GNG5P63218 68 aa6.62□□□□□ -1.35
UBA3-208ENST00000465627 KHDC1LQ5JSQ8 128 aa6.62□□□□□ -1.35
UBA3-208ENST00000465627 DPF1Q92782 380 aa6.62□□□□□ -1.35
UBA3-208ENST00000465627 RPUSD4Q96CM3 377 aaKnown RBP6.62□□□□□ -1.35
UBA3-208ENST00000465627 MRPL53Q96EL3 112 aaKnown RBP6.62□□□□□ -1.35
UBA3-208ENST00000465627 GRAMD2BQ96HH9 432 aa6.62□□□□□ -1.35
UBA3-208ENST00000465627 LINC00479Q96M42 142 aa6.62□□□□□ -1.35
UBA3-208ENST00000465627 SMIM7Q9BQ49 75 aa6.62□□□□□ -1.35
UBA3-208ENST00000465627 SLC50A1Q9BRV3 221 aa6.62□□□□□ -1.35
UBA3-208ENST00000465627 ATG101Q9BSB4 218 aa6.62□□□□□ -1.35
UBA3-208ENST00000465627 LY96Q9Y6Y9 160 aa6.62□□□□□ -1.35
UBA3-208ENST00000465627 STAB2Q8WWQ8 2551 aa6.61□□□□□ -1.35
UBA3-208ENST00000465627 A0A1W2PRX2 142 aa6.61□□□□□ -1.35
UBA3-208ENST00000465627 HELTA6NFD8 242 aa6.61□□□□□ -1.35
UBA3-208ENST00000465627 ZNF727A8MUV8 499 aa6.61□□□□□ -1.35
UBA3-208ENST00000465627 DIRC3C9JPN6 131 aa6.61□□□□□ -1.35
UBA3-208ENST00000465627 ISLRO14498 428 aa6.61□□□□□ -1.35
UBA3-208ENST00000465627 SLC25A5P05141 298 aaKnown RBP6.61□□□□□ -1.35
UBA3-208ENST00000465627 ATF4P18848 351 aaPredicted RBP6.61□□□□□ -1.35
UBA3-208ENST00000465627 RPL23P62829 140 aaKnown RBP6.61□□□□□ -1.35
UBA3-208ENST00000465627 PSG9Q00887 426 aa6.61□□□□□ -1.35
UBA3-208ENST00000465627 TMEM183BQ1AE95 376 aa6.61□□□□□ -1.35
UBA3-208ENST00000465627 IGFL4Q6B9Z1 124 aa6.61□□□□□ -1.35
UBA3-208ENST00000465627 TCF24Q7RTU0 167 aa6.61□□□□□ -1.35
UBA3-208ENST00000465627 SVBPQ8N300 66 aa6.61□□□□□ -1.35
UBA3-208ENST00000465627 CLRN3Q8NCR9 226 aa6.61□□□□□ -1.35
UBA3-208ENST00000465627 C20orf173Q96LM9 149 aa6.61□□□□□ -1.35
UBA3-208ENST00000465627 MLST8Q9BVC4 326 aa6.61□□□□□ -1.35
UBA3-208ENST00000465627 NRN1Q9NPD7 142 aa6.61□□□□□ -1.35
UBA3-208ENST00000465627 PRAC2D3DTV9 90 aa6.6□□□□□ -1.35
UBA3-208ENST00000465627 K7EN84 100 aa6.6□□□□□ -1.35
UBA3-208ENST00000465627 K7EQG2 157 aa6.6□□□□□ -1.35
UBA3-208ENST00000465627 TAS2R60P59551 318 aa6.6□□□□□ -1.35
UBA3-208ENST00000465627 PNRC1Q12796 327 aaPredicted RBP6.6□□□□□ -1.35
UBA3-208ENST00000465627 TMEM241Q24JQ0 296 aa6.6□□□□□ -1.35
UBA3-208ENST00000465627 COX8CQ7Z4L0 72 aa6.6□□□□□ -1.35
UBA3-208ENST00000465627 LINC01551Q86U37 167 aa6.6□□□□□ -1.35
UBA3-208ENST00000465627 TVP23CQ96ET8 276 aa6.6□□□□□ -1.35
UBA3-208ENST00000465627 LYSTQ99698 3801 aa6.6□□□□□ -1.35
UBA3-208ENST00000465627 NIPSNAP3BQ9BS92 247 aa6.6□□□□□ -1.35
UBA3-208ENST00000465627 PEMTQ9UBM1 199 aa6.6□□□□□ -1.35
UBA3-208ENST00000465627 NAT8Q9UHE5 227 aa6.6□□□□□ -1.35
UBA3-208ENST00000465627 PRELID1Q9Y255 219 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms