RNA–Protein interactions for RNA: ENST00000465039.5

LIMD1-203, Transcript of LIM domains containing 1, humanhuman

TSL 5

Gene LIMD1, Length 676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-203ENST00000465039 SH3BGRL3Q9H299 93 aa10.01□□□□□ -0.81
LIMD1-203ENST00000465039 C11orf68Q9H3H3 251 aaKnown RBP10.01□□□□□ -0.81
LIMD1-203ENST00000465039 ZNF705EA8MWA4 302 aaPredicted RBP10□□□□□ -0.81
LIMD1-203ENST00000465039 PFDN1O60925 122 aa10□□□□□ -0.81
LIMD1-203ENST00000465039 AKR1C8PQ5T2L2 129 aa10□□□□□ -0.81
LIMD1-203ENST00000465039 OR4B1Q8NGF8 309 aa10□□□□□ -0.81
LIMD1-203ENST00000465039 SUN5Q8TC36 379 aa10□□□□□ -0.81
LIMD1-203ENST00000465039 RAB24Q969Q5 203 aa10□□□□□ -0.81
LIMD1-203ENST00000465039 ZNF503Q96F45 646 aa10□□□□□ -0.81
LIMD1-203ENST00000465039 NEU1Q99519 415 aa10□□□□□ -0.81
LIMD1-203ENST00000465039 RETNQ9HD89 108 aa10□□□□□ -0.81
LIMD1-203ENST00000465039 TRBV7-9A0A0J9YWB2 115 aa9.99□□□□□ -0.81
LIMD1-203ENST00000465039 CTXND1A0A1B0GTU2 59 aa9.99□□□□□ -0.81
LIMD1-203ENST00000465039 NPIPB6E9PJ23 425 aa9.99□□□□□ -0.81
LIMD1-203ENST00000465039 F6UB75 175 aa9.99□□□□□ -0.81
LIMD1-203ENST00000465039 BOLA2-SMG1P6H3BVE0 249 aa9.99□□□□□ -0.81
LIMD1-203ENST00000465039 CXorf1O96002 111 aa9.99□□□□□ -0.81
LIMD1-203ENST00000465039 MIFP14174 115 aa9.99□□□□□ -0.81
LIMD1-203ENST00000465039 FAM74A1Q5RGS3 127 aa9.99□□□□□ -0.81
LIMD1-203ENST00000465039 IGFL4Q6B9Z1 124 aa9.99□□□□□ -0.81
LIMD1-203ENST00000465039 EIF5AL1Q6IS14 154 aaKnown RBP9.99□□□□□ -0.81
LIMD1-203ENST00000465039 FAM122CQ6P4D5 195 aa9.99□□□□□ -0.81
LIMD1-203ENST00000465039 DPPA3Q6W0C5 159 aa9.99□□□□□ -0.81
LIMD1-203ENST00000465039 ZNF705AQ6ZN79 300 aaPredicted RBP9.99□□□□□ -0.81
LIMD1-203ENST00000465039 RXFP4Q8TDU9 374 aa9.99□□□□□ -0.81
LIMD1-203ENST00000465039 RARRES2Q99969 163 aa9.99□□□□□ -0.81
LIMD1-203ENST00000465039 TMEM167BQ9NRX6 74 aa9.99□□□□□ -0.81
LIMD1-203ENST00000465039 RBAKDNA6NC62 111 aa9.98□□□□□ -0.81
LIMD1-203ENST00000465039 SMIM9A6NGZ8 99 aa9.98□□□□□ -0.81
LIMD1-203ENST00000465039 SLC25A5P05141 298 aaKnown RBP9.98□□□□□ -0.81
LIMD1-203ENST00000465039 OR10J4P0C629 311 aa9.98□□□□□ -0.81
LIMD1-203ENST00000465039 ARL14EPLP0DKL9 152 aa9.98□□□□□ -0.81
LIMD1-203ENST00000465039 TPT1P13693 172 aaKnown RBP9.98□□□□□ -0.81
LIMD1-203ENST00000465039 TSPOP30536 169 aa9.98□□□□□ -0.81
LIMD1-203ENST00000465039 HIST1H1AQ02539 215 aaPredicted RBP9.98□□□□□ -0.81
LIMD1-203ENST00000465039 TMUB2Q71RG4 321 aa9.98□□□□□ -0.81
LIMD1-203ENST00000465039 BAP18Q8IXM2 172 aa9.98□□□□□ -0.81
LIMD1-203ENST00000465039 OR11H2Q8NH07 326 aa9.98□□□□□ -0.81
LIMD1-203ENST00000465039 BLNKQ8WV28 456 aa9.98□□□□□ -0.81
LIMD1-203ENST00000465039 IGF2BP2-AS1Q96M15 143 aa9.98□□□□□ -0.81
LIMD1-203ENST00000465039 C20orf144Q9BQM9 153 aa9.98□□□□□ -0.81
LIMD1-203ENST00000465039 ZNF471Q9BX82 626 aaPredicted RBP9.98□□□□□ -0.81
LIMD1-203ENST00000465039 OTORQ9NRC9 128 aa9.98□□□□□ -0.81
LIMD1-203ENST00000465039 RFNGQ9Y644 331 aa9.98□□□□□ -0.81
LIMD1-203ENST00000465039 ZNF705FA8MVS1 300 aaPredicted RBP9.97□□□□□ -0.81
LIMD1-203ENST00000465039 H3BTX0 84 aa9.97□□□□□ -0.81
LIMD1-203ENST00000465039 INSP01308 110 aa9.97□□□□□ -0.81
LIMD1-203ENST00000465039 NMBP08949 121 aa9.97□□□□□ -0.81
LIMD1-203ENST00000465039 ZNF705DP0CH99 300 aaPredicted RBP9.97□□□□□ -0.81
LIMD1-203ENST00000465039 ZNF705BP0CI00 300 aaPredicted RBP9.97□□□□□ -0.81
LIMD1-203ENST00000465039 HLA-DMBP28068 263 aa9.97□□□□□ -0.81
LIMD1-203ENST00000465039 CSN1S1P47710 185 aa9.97□□□□□ -0.81
LIMD1-203ENST00000465039 DEFB1P60022 68 aa9.97□□□□□ -0.81
LIMD1-203ENST00000465039 C9orf47Q6ZRZ4 202 aa9.97□□□□□ -0.81
LIMD1-203ENST00000465039 TMEM256Q8N2U0 113 aa9.97□□□□□ -0.81
LIMD1-203ENST00000465039 PHYHIPLQ96FC7 376 aa9.97□□□□□ -0.81
LIMD1-203ENST00000465039 LINC00477Q96M19 166 aa9.97□□□□□ -0.81
LIMD1-203ENST00000465039 XCL2Q9UBD3 114 aa9.97□□□□□ -0.81
LIMD1-203ENST00000465039 GOLT1BQ9Y3E0 138 aa9.97□□□□□ -0.81
LIMD1-203ENST00000465039 hCG_2014768A0A024R1R8 64 aa9.96□□□□□ -0.82
LIMD1-203ENST00000465039 SERTM2A0A1B0GWG4 89 aa9.96□□□□□ -0.82
LIMD1-203ENST00000465039 C3orf84H3BNL1 204 aa9.96□□□□□ -0.82
LIMD1-203ENST00000465039 GCHFRP30047 84 aa9.96□□□□□ -0.82
LIMD1-203ENST00000465039 CDKN1BP46527 198 aa9.96□□□□□ -0.82
LIMD1-203ENST00000465039 RAB5CP51148 216 aa9.96□□□□□ -0.82
LIMD1-203ENST00000465039 ICAM4Q14773 271 aa9.96□□□□□ -0.82
LIMD1-203ENST00000465039 ZFP69Q49AA0 526 aa9.96□□□□□ -0.82
LIMD1-203ENST00000465039 TMED6Q8WW62 240 aa9.96□□□□□ -0.82
LIMD1-203ENST00000465039 SLC35B3Q9H1N7 401 aa9.96□□□□□ -0.82
LIMD1-203ENST00000465039 Q9H3A6 140 aa9.96□□□□□ -0.82
LIMD1-203ENST00000465039 PPP1R14DQ9NXH3 145 aa9.96□□□□□ -0.82
LIMD1-203ENST00000465039 ARL2-SNX15V9GYD0 113 aa9.96□□□□□ -0.82
LIMD1-203ENST00000465039 TMEM189A5PLL7 270 aa9.95□□□□□ -0.82
LIMD1-203ENST00000465039 M0R3E3 92 aa9.95□□□□□ -0.82
LIMD1-203ENST00000465039 IGKV3-20P01619 116 aa9.95□□□□□ -0.82
LIMD1-203ENST00000465039 SNRPCP09234 159 aaKnown RBP9.95□□□□□ -0.82
LIMD1-203ENST00000465039 LEPP41159 167 aa9.95□□□□□ -0.82
LIMD1-203ENST00000465039 RANP62826 216 aaKnown RBP9.95□□□□□ -0.82
LIMD1-203ENST00000465039 LGALSLQ3ZCW2 172 aaPredicted RBP9.95□□□□□ -0.82
LIMD1-203ENST00000465039 SLC51BQ86UW2 128 aa9.95□□□□□ -0.82
LIMD1-203ENST00000465039 EXOC3-AS1Q8N2X6 119 aa9.95□□□□□ -0.82
LIMD1-203ENST00000465039 Q8NAQ8 132 aa9.95□□□□□ -0.82
LIMD1-203ENST00000465039 MUC7Q8TAX7 377 aa9.95□□□□□ -0.82
LIMD1-203ENST00000465039 NKX6-2Q9C056 277 aaPredicted RBP9.95□□□□□ -0.82
LIMD1-203ENST00000465039 LENEPQ9Y5L5 61 aa9.95□□□□□ -0.82
LIMD1-203ENST00000465039 X6R8D5 127 aa9.95□□□□□ -0.82
LIMD1-203ENST00000465039 A0A1W2PRE2 83 aa9.94□□□□□ -0.82
LIMD1-203ENST00000465039 FBLL1A6NHQ2 334 aaKnown RBP9.94□□□□□ -0.82
LIMD1-203ENST00000465039 PRAC2D3DTV9 90 aa9.94□□□□□ -0.82
LIMD1-203ENST00000465039 CRISP2P16562 243 aa9.94□□□□□ -0.82
LIMD1-203ENST00000465039 ZNF726P1Q15940 193 aa9.94□□□□□ -0.82
LIMD1-203ENST00000465039 C5orf17Q8NAS9 161 aa9.94□□□□□ -0.82
LIMD1-203ENST00000465039 CMTM2Q8TAZ6 248 aa9.94□□□□□ -0.82
LIMD1-203ENST00000465039 TCEAL7Q9BRU2 100 aa9.94□□□□□ -0.82
LIMD1-203ENST00000465039 TEX48A0A1B0GUV7 120 aa9.93□□□□□ -0.82
LIMD1-203ENST00000465039 CRXO43186 299 aaPredicted RBP9.93□□□□□ -0.82
LIMD1-203ENST00000465039 SPINK13Q1W4C9 94 aa9.93□□□□□ -0.82
LIMD1-203ENST00000465039 TMEM78Q5T7P6 136 aa9.93□□□□□ -0.82
LIMD1-203ENST00000465039 C9orf62Q8N4C0 152 aa9.93□□□□□ -0.82
LIMD1-203ENST00000465039 FAM19A4Q96LR4 140 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 163.7 ms