RNA–Protein interactions for RNA: ENST00000464480.1

HMGXB4-205, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-205ENST00000464480 ADGRB2O60241 1585 aa1.93□□□□□ -2.1
HMGXB4-205ENST00000464480 NUP210LQ5VU65 1888 aa1.92□□□□□ -2.1
HMGXB4-205ENST00000464480 MYO5AQ9Y4I1 1855 aaKnown RBP1.92□□□□□ -2.1
HMGXB4-205ENST00000464480 DLC1Q96QB1 1528 aa1.92□□□□□ -2.1
HMGXB4-205ENST00000464480 USP32Q8NFA0 1604 aa1.92□□□□□ -2.1
HMGXB4-205ENST00000464480 FMN2Q9NZ56 1722 aa1.92□□□□□ -2.1
HMGXB4-205ENST00000464480 hCG_1818297A0A087WSY0 165 aa1.92□□□□□ -2.1
HMGXB4-205ENST00000464480 TRAV26-2A0A0B4J265 109 aa1.92□□□□□ -2.1
HMGXB4-205ENST00000464480 A0A1W2PPM0 123 aa1.92□□□□□ -2.1
HMGXB4-205ENST00000464480 FAM24AA6NFZ4 105 aa1.92□□□□□ -2.1
HMGXB4-205ENST00000464480 A8MT66 165 aa1.92□□□□□ -2.1
HMGXB4-205ENST00000464480 H3BMG7 143 aa1.92□□□□□ -2.1
HMGXB4-205ENST00000464480 NDUFB6O95139 128 aa1.92□□□□□ -2.1
HMGXB4-205ENST00000464480 APOMO95445 188 aa1.92□□□□□ -2.1
HMGXB4-205ENST00000464480 TRACP01848 142 aa1.92□□□□□ -2.1
HMGXB4-205ENST00000464480 IGHMP01871 453 aa1.92□□□□□ -2.1
HMGXB4-205ENST00000464480 APOC2P02655 101 aa1.92□□□□□ -2.1
HMGXB4-205ENST00000464480 CXCL1P09341 107 aa1.92□□□□□ -2.1
HMGXB4-205ENST00000464480 CECR9P0C854 216 aa1.92□□□□□ -2.1
HMGXB4-205ENST00000464480 P0DMU3 169 aa1.92□□□□□ -2.1
HMGXB4-205ENST00000464480 FAM231AP0DMU4 169 aa1.92□□□□□ -2.1
HMGXB4-205ENST00000464480 FAM231CP0DMU5 169 aa1.92□□□□□ -2.1
HMGXB4-205ENST00000464480 ZNF708P17019 499 aa1.92□□□□□ -2.1
HMGXB4-205ENST00000464480 PSMB8P28062 276 aa1.92□□□□□ -2.1
HMGXB4-205ENST00000464480 CCR2P41597 374 aa1.92□□□□□ -2.1
HMGXB4-205ENST00000464480 LPAR6P43657 344 aa1.92□□□□□ -2.1
HMGXB4-205ENST00000464480 H2BFSP57053 126 aa1.92□□□□□ -2.1
HMGXB4-205ENST00000464480 HERVK_113P63121 156 aa1.92□□□□□ -2.1
HMGXB4-205ENST00000464480 HLA-DRB3P79483 266 aa1.92□□□□□ -2.1
HMGXB4-205ENST00000464480 PRDX1Q06830 199 aaKnown RBP1.92□□□□□ -2.1
HMGXB4-205ENST00000464480 EIF3IQ13347 325 aaKnown RBP1.92□□□□□ -2.1
HMGXB4-205ENST00000464480 MSMO1Q15800 293 aa1.92□□□□□ -2.1
HMGXB4-205ENST00000464480 Q56UQ5 140 aa1.92□□□□□ -2.1
HMGXB4-205ENST00000464480 FAM201AQ5SY85 155 aa1.92□□□□□ -2.1
HMGXB4-205ENST00000464480 MRPL2Q5T653 305 aaKnown RBP1.92□□□□□ -2.1
HMGXB4-205ENST00000464480 KRTAP5-5Q701N2 237 aaPredicted RBP1.92□□□□□ -2.1
HMGXB4-205ENST00000464480 ZNF550Q7Z398 422 aa1.92□□□□□ -2.1
HMGXB4-205ENST00000464480 LINC00471Q8N535 108 aa1.92□□□□□ -2.1
HMGXB4-205ENST00000464480 C3orf22Q8N5N4 141 aa1.92□□□□□ -2.1
HMGXB4-205ENST00000464480 SGMS2Q8NHU3 365 aa1.92□□□□□ -2.1
HMGXB4-205ENST00000464480 PPDPFLQ8WWR9 84 aa1.92□□□□□ -2.1
HMGXB4-205ENST00000464480 CLDN23Q96B33 292 aa1.92□□□□□ -2.1
HMGXB4-205ENST00000464480 LINC00526Q96FQ7 95 aa1.92□□□□□ -2.1
HMGXB4-205ENST00000464480 SPACA5Q96QH8 159 aa1.92□□□□□ -2.1
HMGXB4-205ENST00000464480 LINC01587Q99440 93 aa1.92□□□□□ -2.1
HMGXB4-205ENST00000464480 NAA38Q9BRA0 125 aaKnown RBP1.92□□□□□ -2.1
HMGXB4-205ENST00000464480 TMEM147Q9BVK8 224 aa1.92□□□□□ -2.1
HMGXB4-205ENST00000464480 IMUPQ9GZP8 106 aa1.92□□□□□ -2.1
HMGXB4-205ENST00000464480 COMMD5Q9GZQ3 224 aa1.92□□□□□ -2.1
HMGXB4-205ENST00000464480 LINC00312Q9Y6C7 94 aa1.92□□□□□ -2.1
HMGXB4-205ENST00000464480 CHCHD2Q9Y6H1 151 aaPredicted RBP1.92□□□□□ -2.1
HMGXB4-205ENST00000464480 PTPRMP28827 1452 aa1.92□□□□□ -2.1
HMGXB4-205ENST00000464480 CLTCQ00610 1675 aaKnown RBP1.92□□□□□ -2.1
HMGXB4-205ENST00000464480 ANKRD36CQ5JPF3 1778 aa1.92□□□□□ -2.1
HMGXB4-205ENST00000464480 SBF1O95248 1867 aa1.92□□□□□ -2.1
HMGXB4-205ENST00000464480 TECPR2O15040 1411 aa1.91□□□□□ -2.1
HMGXB4-205ENST00000464480 MAP3K4Q9Y6R4 1608 aa1.91□□□□□ -2.1
HMGXB4-205ENST00000464480 CRYBG1Q9Y4K1 1723 aa1.91□□□□□ -2.1
HMGXB4-205ENST00000464480 XIRP1Q702N8 1843 aaKnown RBP1.91□□□□□ -2.1
HMGXB4-205ENST00000464480 ATG2AQ2TAZ0 1938 aa1.91□□□□□ -2.1
HMGXB4-205ENST00000464480 RGPD8O14715 1765 aaPredicted RBP1.91□□□□□ -2.1
HMGXB4-205ENST00000464480 KDM3BQ7LBC6 1761 aa1.91□□□□□ -2.1
HMGXB4-205ENST00000464480 RGPD5Q99666 1765 aa1.91□□□□□ -2.1
HMGXB4-205ENST00000464480 CEP170Q5SW79 1584 aa1.91□□□□□ -2.1
HMGXB4-205ENST00000464480 TRBV20-1A0A075B6N2 111 aa1.91□□□□□ -2.1
HMGXB4-205ENST00000464480 TRAV9-1A0A075B6T8 112 aa1.91□□□□□ -2.1
HMGXB4-205ENST00000464480 MUC21A0A0G2JKD1 596 aa1.91□□□□□ -2.1
HMGXB4-205ENST00000464480 LOC107984640A0A0U1RRK4 108 aa1.91□□□□□ -2.1
HMGXB4-205ENST00000464480 MUC21A0A140T8X8 626 aa1.91□□□□□ -2.1
HMGXB4-205ENST00000464480 TRDV1A0A1B0GX56 115 aa1.91□□□□□ -2.1
HMGXB4-205ENST00000464480 MYBPHLA2RUH7 354 aa1.91□□□□□ -2.1
HMGXB4-205ENST00000464480 IZUMO1RA6ND01 250 aa1.91□□□□□ -2.1
HMGXB4-205ENST00000464480 DPRXA6NFQ7 191 aa1.91□□□□□ -2.1
HMGXB4-205ENST00000464480 KNCNA6PVL3 124 aa1.91□□□□□ -2.1
HMGXB4-205ENST00000464480 J3QQQ9 107 aa1.91□□□□□ -2.1
HMGXB4-205ENST00000464480 UPK2O00526 184 aa1.91□□□□□ -2.1
HMGXB4-205ENST00000464480 IGHG2P01859 326 aa1.91□□□□□ -2.1
HMGXB4-205ENST00000464480 MT-ATP8P03928 68 aa1.91□□□□□ -2.1
HMGXB4-205ENST00000464480 SLC25A5P05141 298 aaKnown RBP1.91□□□□□ -2.1
HMGXB4-205ENST00000464480 CRYGSP22914 178 aa1.91□□□□□ -2.1
HMGXB4-205ENST00000464480 TAS2R45P59539 299 aa1.91□□□□□ -2.1
HMGXB4-205ENST00000464480 SSBP1Q04837 148 aaKnown RBP1.91□□□□□ -2.1
HMGXB4-205ENST00000464480 SLC38A11Q08AI6 406 aa1.91□□□□□ -2.1
HMGXB4-205ENST00000464480 MPV17LQ2QL34 196 aa1.91□□□□□ -2.1
HMGXB4-205ENST00000464480 LINC00303Q3SY05 128 aa1.91□□□□□ -2.1
HMGXB4-205ENST00000464480 LAIR2Q6ISS4 152 aa1.91□□□□□ -2.1
HMGXB4-205ENST00000464480 TMEM14EPQ6UXP3 125 aa1.91□□□□□ -2.1
HMGXB4-205ENST00000464480 SCGB1D4Q6XE38 83 aa1.91□□□□□ -2.1
HMGXB4-205ENST00000464480 TMEM91Q6ZNR0 172 aa1.91□□□□□ -2.1
HMGXB4-205ENST00000464480 TMEM136Q6ZRR5 245 aa1.91□□□□□ -2.1
HMGXB4-205ENST00000464480 TRAPPC6BQ86SZ2 158 aa1.91□□□□□ -2.1
HMGXB4-205ENST00000464480 BPIFA4PQ86YQ2 179 aa1.91□□□□□ -2.1
HMGXB4-205ENST00000464480 ATOH7Q8N100 152 aa1.91□□□□□ -2.1
HMGXB4-205ENST00000464480 ZIC4Q8N9L1 334 aa1.91□□□□□ -2.1
HMGXB4-205ENST00000464480 LINC00304Q8N9R0 145 aa1.91□□□□□ -2.1
HMGXB4-205ENST00000464480 OTOSQ8NHW6 89 aa1.91□□□□□ -2.1
HMGXB4-205ENST00000464480 C18orf32Q8TCD1 76 aa1.91□□□□□ -2.1
HMGXB4-205ENST00000464480 SMIM4Q8WVI0 70 aa1.91□□□□□ -2.1
HMGXB4-205ENST00000464480 BORCS8Q96FH0 119 aa1.91□□□□□ -2.1
HMGXB4-205ENST00000464480 RTL8AQ9BWD3 113 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms