RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 A0A1B0GWB2 263 aa7.29□□□□□ -1.24
HPS4-208ENST00000464362 SH2D1AO60880 128 aa7.29□□□□□ -1.24
HPS4-208ENST00000464362 IGLV1-44P01699 117 aa7.29□□□□□ -1.24
HPS4-208ENST00000464362 EMP1P54849 157 aa7.29□□□□□ -1.24
HPS4-208ENST00000464362 RNF182Q8N6D2 247 aa7.29□□□□□ -1.24
HPS4-208ENST00000464362 C20orf144Q9BQM9 153 aa7.29□□□□□ -1.24
HPS4-208ENST00000464362 ST20Q9HBF5 79 aa7.29□□□□□ -1.24
HPS4-208ENST00000464362 ATG2AQ2TAZ0 1938 aa7.29□□□□□ -1.24
HPS4-208ENST00000464362 ABCA12Q86UK0 2595 aa7.28□□□□□ -1.24
HPS4-208ENST00000464362 HCFC1P51610 2035 aa7.28□□□□□ -1.24
HPS4-208ENST00000464362 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.28□□□□□ -1.24
HPS4-208ENST00000464362 THBDP07204 575 aa7.28□□□□□ -1.24
HPS4-208ENST00000464362 ASIPP42127 132 aa7.28□□□□□ -1.24
HPS4-208ENST00000464362 RAB9AP51151 201 aa7.28□□□□□ -1.24
HPS4-208ENST00000464362 LCNL1Q6ZST4 164 aa7.28□□□□□ -1.24
HPS4-208ENST00000464362 TMEM75Q8N9X5 138 aa7.28□□□□□ -1.24
HPS4-208ENST00000464362 OR2K2Q8NGT1 345 aa7.28□□□□□ -1.24
HPS4-208ENST00000464362 CHCHD1Q96BP2 118 aaKnown RBP7.28□□□□□ -1.24
HPS4-208ENST00000464362 C8orf49Q96NF6 230 aa7.28□□□□□ -1.24
HPS4-208ENST00000464362 IGHV3-64A0A075B6Q5 118 aa7.28□□□□□ -1.24
HPS4-208ENST00000464362 HAX1O00165 279 aa7.28□□□□□ -1.24
HPS4-208ENST00000464362 PROP1O75360 226 aa7.28□□□□□ -1.24
HPS4-208ENST00000464362 CEACAM4O75871 244 aa7.28□□□□□ -1.24
HPS4-208ENST00000464362 CEACAM8P31997 349 aaPredicted RBP7.28□□□□□ -1.24
HPS4-208ENST00000464362 TTC32Q5I0X7 151 aa7.28□□□□□ -1.24
HPS4-208ENST00000464362 LYRM7Q5U5X0 104 aa7.28□□□□□ -1.24
HPS4-208ENST00000464362 ZNF295-AS1Q8N0V1 137 aa7.28□□□□□ -1.24
HPS4-208ENST00000464362 C11orf44Q8N8P7 122 aa7.28□□□□□ -1.24
HPS4-208ENST00000464362 CST9LQ9H4G1 147 aa7.28□□□□□ -1.24
HPS4-208ENST00000464362 TRIOO75962 3097 aa7.28□□□□□ -1.24
HPS4-208ENST00000464362 CDKN1BP46527 198 aa7.28□□□□□ -1.24
HPS4-208ENST00000464362 PKD1L2Q7Z442 2459 aa7.27□□□□□ -1.24
HPS4-208ENST00000464362 IGKV1OR2-108A0A075B7D4 117 aa7.27□□□□□ -1.24
HPS4-208ENST00000464362 IGKV3D-20A0A0C4DH25 116 aa7.27□□□□□ -1.24
HPS4-208ENST00000464362 ATP5LO75964 103 aa7.27□□□□□ -1.24
HPS4-208ENST00000464362 TOMM40O96008 361 aa7.27□□□□□ -1.24
HPS4-208ENST00000464362 CD7P09564 240 aa7.27□□□□□ -1.24
HPS4-208ENST00000464362 TMEM155Q4W5P6 130 aa7.27□□□□□ -1.24
HPS4-208ENST00000464362 DUX5Q96PT3 197 aa7.27□□□□□ -1.24
HPS4-208ENST00000464362 KIAA1549Q9HCM3 1950 aa7.27□□□□□ -1.25
HPS4-208ENST00000464362 LGALS3P17931 250 aaKnown RBP7.27□□□□□ -1.25
HPS4-208ENST00000464362 KRTAP27-1Q3LI81 207 aa7.27□□□□□ -1.25
HPS4-208ENST00000464362 CD300EQ496F6 205 aaPredicted RBP7.27□□□□□ -1.25
HPS4-208ENST00000464362 PRSS57Q6UWY2 283 aa7.27□□□□□ -1.25
HPS4-208ENST00000464362 NEU4Q8WWR8 484 aaPredicted RBP7.27□□□□□ -1.25
HPS4-208ENST00000464362 PYGO2Q9BRQ0 406 aa7.27□□□□□ -1.25
HPS4-208ENST00000464362 MRPL27Q9P0M9 148 aaKnown RBP7.27□□□□□ -1.25
HPS4-208ENST00000464362 DKK4Q9UBT3 224 aa7.27□□□□□ -1.25
HPS4-208ENST00000464362 KMT2EQ8IZD2 1858 aa7.27□□□□□ -1.25
HPS4-208ENST00000464362 TMEM238LA0A1B0GVL6 79 aa7.27□□□□□ -1.25
HPS4-208ENST00000464362 GAGE12BA1L429 117 aa7.27□□□□□ -1.25
HPS4-208ENST00000464362 A6NJY4 79 aa7.27□□□□□ -1.25
HPS4-208ENST00000464362 G3V318 75 aa7.27□□□□□ -1.25
HPS4-208ENST00000464362 ZC2HC1BQ5TFG8 222 aa7.27□□□□□ -1.25
HPS4-208ENST00000464362 RNASE8Q8TDE3 154 aaKnown RBP7.27□□□□□ -1.25
HPS4-208ENST00000464362 C11orf1Q9H5F2 150 aa7.27□□□□□ -1.25
HPS4-208ENST00000464362 MYO15AQ9UKN7 3530 aa7.27□□□□□ -1.25
HPS4-208ENST00000464362 E7EUB6 86 aa7.27□□□□□ -1.25
HPS4-208ENST00000464362 PSG3Q16557 428 aa7.27□□□□□ -1.25
HPS4-208ENST00000464362 CENPVQ7Z7K6 275 aaPredicted RBP7.27□□□□□ -1.25
HPS4-208ENST00000464362 C19orf67A6NJJ6 358 aa7.26□□□□□ -1.25
HPS4-208ENST00000464362 SPRY2O43597 315 aa7.26□□□□□ -1.25
HPS4-208ENST00000464362 NDUFS7O75251 213 aa7.26□□□□□ -1.25
HPS4-208ENST00000464362 BCL6BQ8N143 479 aaPredicted RBP7.26□□□□□ -1.25
HPS4-208ENST00000464362 DDB2Q92466 427 aa7.26□□□□□ -1.25
HPS4-208ENST00000464362 RITA1Q96K30 269 aa7.26□□□□□ -1.25
HPS4-208ENST00000464362 CTSZQ9UBR2 303 aa7.26□□□□□ -1.25
HPS4-208ENST00000464362 TMEM131Q92545 1883 aa7.26□□□□□ -1.25
HPS4-208ENST00000464362 A0A0U1RRA0 63 aa7.26□□□□□ -1.25
HPS4-208ENST00000464362 NDUFB8O95169 186 aa7.26□□□□□ -1.25
HPS4-208ENST00000464362 GRNP28799 593 aaKnown RBP7.26□□□□□ -1.25
HPS4-208ENST00000464362 TMEM249Q2WGJ8 235 aa7.26□□□□□ -1.25
HPS4-208ENST00000464362 ANKRD39Q53RE8 183 aa7.26□□□□□ -1.25
HPS4-208ENST00000464362 C11orf52Q96A22 123 aa7.26□□□□□ -1.25
HPS4-208ENST00000464362 FXYD5Q96DB9 178 aa7.26□□□□□ -1.25
HPS4-208ENST00000464362 HLA-DMBP28068 263 aa7.26□□□□□ -1.25
HPS4-208ENST00000464362 BRWD1-AS2P59051 145 aa7.26□□□□□ -1.25
HPS4-208ENST00000464362 LINC00173Q6ZV60 143 aa7.26□□□□□ -1.25
HPS4-208ENST00000464362 PIMREGQ9BSJ6 248 aa7.26□□□□□ -1.25
HPS4-208ENST00000464362 A0A1B0GW15 77 aa7.25□□□□□ -1.25
HPS4-208ENST00000464362 ZNF833PQ6ZTB9 187 aa7.25□□□□□ -1.25
HPS4-208ENST00000464362 MRPL52Q86TS9 123 aaKnown RBP7.25□□□□□ -1.25
HPS4-208ENST00000464362 C14orf178Q8N769 122 aaPredicted RBP7.25□□□□□ -1.25
HPS4-208ENST00000464362 NUP37Q8NFH4 326 aa7.25□□□□□ -1.25
HPS4-208ENST00000464362 TMEM158Q8WZ71 300 aa7.25□□□□□ -1.25
HPS4-208ENST00000464362 MRPL36Q9P0J6 103 aaKnown RBP7.25□□□□□ -1.25
HPS4-208ENST00000464362 DPM2O94777 84 aa7.25□□□□□ -1.25
HPS4-208ENST00000464362 GATA4P43694 442 aa7.25□□□□□ -1.25
HPS4-208ENST00000464362 PAX8Q06710 450 aa7.25□□□□□ -1.25
HPS4-208ENST00000464362 DMDP11532 3685 aa7.25□□□□□ -1.25
HPS4-208ENST00000464362 COL6A3P12111 3177 aa7.25□□□□□ -1.25
HPS4-208ENST00000464362 ZNF688P0C7X2 276 aa7.25□□□□□ -1.25
HPS4-208ENST00000464362 SHANK2-AS3Q9BTD1 123 aa7.25□□□□□ -1.25
HPS4-208ENST00000464362 BPESC1Q9GZL8 116 aa7.25□□□□□ -1.25
HPS4-208ENST00000464362 CYSLTR1Q9Y271 337 aa7.25□□□□□ -1.25
HPS4-208ENST00000464362 COX11Q9Y6N1 276 aa7.25□□□□□ -1.25
HPS4-208ENST00000464362 IGHV1-24A0A0C4DH33 117 aa7.24□□□□□ -1.25
HPS4-208ENST00000464362 CCL19Q99731 98 aa7.24□□□□□ -1.25
HPS4-208ENST00000464362 NXT2Q9NPJ8 142 aaKnown RBP7.24□□□□□ -1.25
HPS4-208ENST00000464362 FNDC10F2Z333 226 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 217 ms