RNA–Protein interactions for RNA: ENST00000464263.1

RAB11FIP3-208, Transcript of RAB11 family interacting protein 3, human

TSL 3

Gene RAB11FIP3, Length 329 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB11FIP3-208	ENST00000464263	TAS2R45	P59539	299 aa		11.17	□□□□□ -0.62
RAB11FIP3-208	ENST00000464263	HIST1H1A	Q02539	215 aa	Predicted RBP	11.17	□□□□□ -0.62
RAB11FIP3-208	ENST00000464263	KHDC3L	Q587J8	217 aa		11.17	□□□□□ -0.62
RAB11FIP3-208	ENST00000464263	FAM122C	Q6P4D5	195 aa		11.17	□□□□□ -0.62
RAB11FIP3-208	ENST00000464263	MRPL53	Q96EL3	112 aa	Known RBP	11.17	□□□□□ -0.62
RAB11FIP3-208	ENST00000464263	PRELID1	Q9Y255	219 aa		11.17	□□□□□ -0.62
RAB11FIP3-208	ENST00000464263		A0A0D9SG52	128 aa		11.16	□□□□□ -0.62
RAB11FIP3-208	ENST00000464263	C3orf84	H3BNL1	204 aa		11.16	□□□□□ -0.62
RAB11FIP3-208	ENST00000464263		M0R3E3	92 aa		11.16	□□□□□ -0.62
RAB11FIP3-208	ENST00000464263	MB	P02144	154 aa		11.16	□□□□□ -0.62
RAB11FIP3-208	ENST00000464263	ZNF705A	Q6ZN79	300 aa	Predicted RBP	11.16	□□□□□ -0.62
RAB11FIP3-208	ENST00000464263	TCTE3	Q8IZS6	198 aa		11.16	□□□□□ -0.62
RAB11FIP3-208	ENST00000464263	EXOC3-AS1	Q8N2X6	119 aa		11.16	□□□□□ -0.62
RAB11FIP3-208	ENST00000464263	ARPC5L	Q9BPX5	153 aa		11.16	□□□□□ -0.62
RAB11FIP3-208	ENST00000464263	CRX	O43186	299 aa	Predicted RBP	11.15	□□□□□ -0.62
RAB11FIP3-208	ENST00000464263	AMBP	P02760	352 aa		11.15	□□□□□ -0.62
RAB11FIP3-208	ENST00000464263	CDC34	P49427	236 aa	Predicted RBP	11.15	□□□□□ -0.62
RAB11FIP3-208	ENST00000464263	ICAM4	Q14773	271 aa		11.15	□□□□□ -0.62
RAB11FIP3-208	ENST00000464263	SPINK13	Q1W4C9	94 aa		11.15	□□□□□ -0.62
RAB11FIP3-208	ENST00000464263	PQLC2	Q6ZP29	291 aa		11.15	□□□□□ -0.62
RAB11FIP3-208	ENST00000464263		Q8NAQ8	132 aa		11.15	□□□□□ -0.62
RAB11FIP3-208	ENST00000464263	RAB24	Q969Q5	203 aa		11.15	□□□□□ -0.62
RAB11FIP3-208	ENST00000464263	PHYHIPL	Q96FC7	376 aa		11.15	□□□□□ -0.62
RAB11FIP3-208	ENST00000464263		M0R2Z0	102 aa		11.14	□□□□□ -0.63
RAB11FIP3-208	ENST00000464263	HMGB3	O15347	200 aa	Known RBP	11.14	□□□□□ -0.63
RAB11FIP3-208	ENST00000464263	STAG3L2	P0CL84	134 aa		11.14	□□□□□ -0.63
RAB11FIP3-208	ENST00000464263	STAG3L3	P0CL85	134 aa		11.14	□□□□□ -0.63
RAB11FIP3-208	ENST00000464263	RBMY1A1	P0DJD3	496 aa	Known RBP	11.14	□□□□□ -0.63
RAB11FIP3-208	ENST00000464263	RBMY1C	P0DJD4	496 aa		11.14	□□□□□ -0.63
RAB11FIP3-208	ENST00000464263	MIF	P14174	115 aa		11.14	□□□□□ -0.63
RAB11FIP3-208	ENST00000464263	UBE2L3	P68036	154 aa	Known RBP	11.14	□□□□□ -0.63
RAB11FIP3-208	ENST00000464263	RBMY1F	Q15415	496 aa	Known RBP	11.14	□□□□□ -0.63
RAB11FIP3-208	ENST00000464263	C1orf158	Q8N1D5	194 aa		11.14	□□□□□ -0.63
RAB11FIP3-208	ENST00000464263	LYPD1	Q8N2G4	141 aa		11.14	□□□□□ -0.63
RAB11FIP3-208	ENST00000464263	OR10J6P	Q8NGY7	276 aa		11.14	□□□□□ -0.63
RAB11FIP3-208	ENST00000464263	IL17D	Q8TAD2	202 aa		11.14	□□□□□ -0.63
RAB11FIP3-208	ENST00000464263	IGF2BP2-AS1	Q96M15	143 aa		11.14	□□□□□ -0.63
RAB11FIP3-208	ENST00000464263	NEU1	Q99519	415 aa		11.14	□□□□□ -0.63
RAB11FIP3-208	ENST00000464263	C11orf68	Q9H3H3	251 aa	Known RBP	11.14	□□□□□ -0.63
RAB11FIP3-208	ENST00000464263	AAMDC	Q9H7C9	122 aa		11.14	□□□□□ -0.63
RAB11FIP3-208	ENST00000464263	hCG_2014768	A0A024R1R8	64 aa		11.13	□□□□□ -0.63
RAB11FIP3-208	ENST00000464263	IGHV4-28	A0A0C4DH34	117 aa		11.13	□□□□□ -0.63
RAB11FIP3-208	ENST00000464263	NPIPB6	E9PJ23	425 aa		11.13	□□□□□ -0.63
RAB11FIP3-208	ENST00000464263	BOLA2-SMG1P6	H3BVE0	249 aa		11.13	□□□□□ -0.63
RAB11FIP3-208	ENST00000464263	DEFB4A	O15263	64 aa		11.13	□□□□□ -0.63
RAB11FIP3-208	ENST00000464263	RAN	P62826	216 aa	Known RBP	11.13	□□□□□ -0.63
RAB11FIP3-208	ENST00000464263	ACTR3C	Q9C0K3	210 aa	Predicted RBP	11.13	□□□□□ -0.63
RAB11FIP3-208	ENST00000464263	BCL2L11	O43521	198 aa		11.12	□□□□□ -0.63
RAB11FIP3-208	ENST00000464263	CT45A10	P0DMU9	189 aa		11.12	□□□□□ -0.63
RAB11FIP3-208	ENST00000464263	ERCC8	Q13216	396 aa		11.12	□□□□□ -0.63
RAB11FIP3-208	ENST00000464263	CASC10	Q5T4H9	136 aa		11.12	□□□□□ -0.63
RAB11FIP3-208	ENST00000464263	TMUB2	Q71RG4	321 aa		11.12	□□□□□ -0.63
RAB11FIP3-208	ENST00000464263	SSX7	Q7RTT5	188 aa		11.12	□□□□□ -0.63
RAB11FIP3-208	ENST00000464263	SUN5	Q8TC36	379 aa		11.12	□□□□□ -0.63
RAB11FIP3-208	ENST00000464263		Q9H3A6	140 aa		11.12	□□□□□ -0.63
RAB11FIP3-208	ENST00000464263	PPP1R14D	Q9NXH3	145 aa		11.12	□□□□□ -0.63
RAB11FIP3-208	ENST00000464263	CSMD3	Q7Z407	3707 aa		11.11	□□□□□ -0.63
RAB11FIP3-208	ENST00000464263	TRAV12-2	A0A075B6T6	113 aa		11.11	□□□□□ -0.63
RAB11FIP3-208	ENST00000464263		A0A1B0GVG6	124 aa		11.11	□□□□□ -0.63
RAB11FIP3-208	ENST00000464263	SMIM9	A6NGZ8	99 aa		11.11	□□□□□ -0.63
RAB11FIP3-208	ENST00000464263	C1QB	P02746	253 aa		11.11	□□□□□ -0.63
RAB11FIP3-208	ENST00000464263	ARL14EPL	P0DKL9	152 aa		11.11	□□□□□ -0.63
RAB11FIP3-208	ENST00000464263	CDKN1B	P46527	198 aa		11.11	□□□□□ -0.63
RAB11FIP3-208	ENST00000464263	ZNF726P1	Q15940	193 aa		11.11	□□□□□ -0.63
RAB11FIP3-208	ENST00000464263	LGALSL	Q3ZCW2	172 aa	Predicted RBP	11.11	□□□□□ -0.63
RAB11FIP3-208	ENST00000464263	ZFAND6	Q6FIF0	208 aa		11.11	□□□□□ -0.63
RAB11FIP3-208	ENST00000464263	BAP18	Q8IXM2	172 aa		11.11	□□□□□ -0.63
RAB11FIP3-208	ENST00000464263	LINC00477	Q96M19	166 aa		11.11	□□□□□ -0.63
RAB11FIP3-208	ENST00000464263	ODF3	Q96PU9	254 aa		11.11	□□□□□ -0.63
RAB11FIP3-208	ENST00000464263	AGPAT4-IT1	Q9H0P7	198 aa		11.11	□□□□□ -0.63
RAB11FIP3-208	ENST00000464263	PLA2G2E	Q9NZK7	142 aa		11.11	□□□□□ -0.63
RAB11FIP3-208	ENST00000464263	GOLT1B	Q9Y3E0	138 aa		11.11	□□□□□ -0.63
RAB11FIP3-208	ENST00000464263	IGHV3OR16-12	A0A075B7B8	117 aa		11.1	□□□□□ -0.63
RAB11FIP3-208	ENST00000464263	KANTR	A0A1W2PQU2	76 aa		11.1	□□□□□ -0.63
RAB11FIP3-208	ENST00000464263	KIR3DS1	Q14943	382 aa		11.1	□□□□□ -0.63
RAB11FIP3-208	ENST00000464263	C9orf47	Q6ZRZ4	202 aa		11.1	□□□□□ -0.63
RAB11FIP3-208	ENST00000464263	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	11.09	□□□□□ -0.63
RAB11FIP3-208	ENST00000464263	PGP	A6NDG6	321 aa		11.09	□□□□□ -0.63
RAB11FIP3-208	ENST00000464263	CXorf1	O96002	111 aa		11.09	□□□□□ -0.63
RAB11FIP3-208	ENST00000464263	INS	P01308	110 aa		11.09	□□□□□ -0.63
RAB11FIP3-208	ENST00000464263	IGKV2D-40	P01614	121 aa	Predicted RBP	11.09	□□□□□ -0.63
RAB11FIP3-208	ENST00000464263	SEC11B	P0C7V7	166 aa		11.09	□□□□□ -0.63
RAB11FIP3-208	ENST00000464263	GCHFR	P30047	84 aa		11.09	□□□□□ -0.63
RAB11FIP3-208	ENST00000464263	TSPO	P30536	169 aa		11.09	□□□□□ -0.63
RAB11FIP3-208	ENST00000464263	CD300C	Q08708	224 aa		11.09	□□□□□ -0.63
RAB11FIP3-208	ENST00000464263	AKR1C8P	Q5T2L2	129 aa		11.09	□□□□□ -0.63
RAB11FIP3-208	ENST00000464263	AKAP14	Q86UN6	197 aa		11.09	□□□□□ -0.63
RAB11FIP3-208	ENST00000464263	FAM19A4	Q96LR4	140 aa		11.09	□□□□□ -0.63
RAB11FIP3-208	ENST00000464263	VGLL1	Q99990	258 aa		11.09	□□□□□ -0.63
RAB11FIP3-208	ENST00000464263	ZNF471	Q9BX82	626 aa	Predicted RBP	11.09	□□□□□ -0.63
RAB11FIP3-208	ENST00000464263	OTOR	Q9NRC9	128 aa		11.09	□□□□□ -0.63
RAB11FIP3-208	ENST00000464263	CTXND1	A0A1B0GTU2	59 aa		11.08	□□□□□ -0.64
RAB11FIP3-208	ENST00000464263	ARL6IP6	Q8N6S5	226 aa		11.08	□□□□□ -0.64
RAB11FIP3-208	ENST00000464263	RXFP4	Q8TDU9	374 aa		11.08	□□□□□ -0.64
RAB11FIP3-208	ENST00000464263	HYLS1	Q96M11	299 aa		11.08	□□□□□ -0.64
RAB11FIP3-208	ENST00000464263	RBAKDN	A6NC62	111 aa		11.07	□□□□□ -0.64
RAB11FIP3-208	ENST00000464263	DIRC3	C9JPN6	131 aa		11.07	□□□□□ -0.64
RAB11FIP3-208	ENST00000464263	PFDN1	O60925	122 aa		11.07	□□□□□ -0.64
RAB11FIP3-208	ENST00000464263	PRM2	P04554	102 aa		11.07	□□□□□ -0.64
RAB11FIP3-208	ENST00000464263	SLC25A5	P05141	298 aa	Known RBP	11.07	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms