RNA–Protein interactions for RNA: ENST00000463908.2

LMNB1-204, Transcript of lamin B1, humanhuman

TSL 4

Gene LMNB1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-204ENST00000463908 C4BPBP20851 252 aa13.84□□□□□ -0.19
LMNB1-204ENST00000463908 PSG9Q00887 426 aa13.84□□□□□ -0.19
LMNB1-204ENST00000463908 ZFP69Q49AA0 526 aa13.84□□□□□ -0.19
LMNB1-204ENST00000463908 MORN3Q6PF18 240 aaPredicted RBP13.84□□□□□ -0.19
LMNB1-204ENST00000463908 PQLC2Q6ZP29 291 aa13.84□□□□□ -0.19
LMNB1-204ENST00000463908 BAP18Q8IXM2 172 aa13.84□□□□□ -0.19
LMNB1-204ENST00000463908 C9orf62Q8N4C0 152 aa13.84□□□□□ -0.19
LMNB1-204ENST00000463908 OR4B1Q8NGF8 309 aa13.84□□□□□ -0.19
LMNB1-204ENST00000463908 PHYHIPLQ96FC7 376 aa13.84□□□□□ -0.19
LMNB1-204ENST00000463908 RCHY1Q96PM5 261 aa13.84□□□□□ -0.19
LMNB1-204ENST00000463908 CLEC5AQ9NY25 188 aa13.84□□□□□ -0.19
LMNB1-204ENST00000463908 M0R3E3 92 aa13.83□□□□□ -0.2
LMNB1-204ENST00000463908 CA1P00915 261 aaPredicted RBP13.83□□□□□ -0.2
LMNB1-204ENST00000463908 CNN1P51911 297 aaKnown RBP13.83□□□□□ -0.2
LMNB1-204ENST00000463908 DEFB135Q30KP9 77 aa13.83□□□□□ -0.2
LMNB1-204ENST00000463908 AMTNQ6UX39 209 aa13.83□□□□□ -0.2
LMNB1-204ENST00000463908 OR8A1Q8NGG7 326 aa13.83□□□□□ -0.2
LMNB1-204ENST00000463908 STOML3Q8TAV4 291 aa13.83□□□□□ -0.2
LMNB1-204ENST00000463908 RNF183Q96D59 192 aa13.83□□□□□ -0.2
LMNB1-204ENST00000463908 SPRY2O43597 315 aa13.82□□□□□ -0.2
LMNB1-204ENST00000463908 ARL14EPLP0DKL9 152 aa13.82□□□□□ -0.2
LMNB1-204ENST00000463908 RANP62826 216 aaKnown RBP13.82□□□□□ -0.2
LMNB1-204ENST00000463908 UBE2L3P68036 154 aaKnown RBP13.82□□□□□ -0.2
LMNB1-204ENST00000463908 ICAM4Q14773 271 aa13.82□□□□□ -0.2
LMNB1-204ENST00000463908 AKR1C8PQ5T2L2 129 aa13.82□□□□□ -0.2
LMNB1-204ENST00000463908 CSNK1G2-AS1Q8NCQ2 148 aa13.82□□□□□ -0.2
LMNB1-204ENST00000463908 SUN5Q8TC36 379 aa13.82□□□□□ -0.2
LMNB1-204ENST00000463908 DUSP14O95147 198 aaKnown RBP13.81□□□□□ -0.2
LMNB1-204ENST00000463908 TPT1P13693 172 aaKnown RBP13.81□□□□□ -0.2
LMNB1-204ENST00000463908 FHITP49789 147 aa13.81□□□□□ -0.2
LMNB1-204ENST00000463908 FXYD7P58549 80 aa13.81□□□□□ -0.2
LMNB1-204ENST00000463908 EIF5AP63241 154 aaKnown RBP13.81□□□□□ -0.2
LMNB1-204ENST00000463908 SLC35B3Q9H1N7 401 aa13.81□□□□□ -0.2
LMNB1-204ENST00000463908 TP53TG1Q9Y2A0 90 aa13.81□□□□□ -0.2
LMNB1-204ENST00000463908 CTXND1A0A1B0GTU2 59 aa13.8□□□□□ -0.2
LMNB1-204ENST00000463908 GCHFRP30047 84 aa13.8□□□□□ -0.2
LMNB1-204ENST00000463908 NKX2-5P52952 324 aaPredicted RBP13.8□□□□□ -0.2
LMNB1-204ENST00000463908 HIST1H1AQ02539 215 aaPredicted RBP13.8□□□□□ -0.2
LMNB1-204ENST00000463908 TMED6Q8WW62 240 aa13.8□□□□□ -0.2
LMNB1-204ENST00000463908 MRPL53Q96EL3 112 aaKnown RBP13.8□□□□□ -0.2
LMNB1-204ENST00000463908 PRELID1Q9Y255 219 aa13.8□□□□□ -0.2
LMNB1-204ENST00000463908 TENM3Q9P273 2699 aa13.8□□□□□ -0.2
LMNB1-204ENST00000463908 NUTF2P61970 127 aaKnown RBP13.79□□□□□ -0.2
LMNB1-204ENST00000463908 LYPD1Q8N2G4 141 aa13.79□□□□□ -0.2
LMNB1-204ENST00000463908 Q9H3A6 140 aa13.79□□□□□ -0.2
LMNB1-204ENST00000463908 AAMDCQ9H7C9 122 aa13.79□□□□□ -0.2
LMNB1-204ENST00000463908 XCL2Q9UBD3 114 aa13.79□□□□□ -0.2
LMNB1-204ENST00000463908 CXorf1O96002 111 aa13.78□□□□□ -0.2
LMNB1-204ENST00000463908 SLC51BQ86UW2 128 aa13.78□□□□□ -0.2
LMNB1-204ENST00000463908 TMPRSS5Q9H3S3 457 aa13.78□□□□□ -0.2
LMNB1-204ENST00000463908 UMAD1C9J7I0 102 aa13.77□□□□□ -0.21
LMNB1-204ENST00000463908 PGPA6NDG6 321 aa13.76□□□□□ -0.21
LMNB1-204ENST00000463908 NPIPB6E9PJ23 425 aa13.76□□□□□ -0.21
LMNB1-204ENST00000463908 FGF8P55075 233 aaPredicted RBP13.76□□□□□ -0.21
LMNB1-204ENST00000463908 ERCC8Q13216 396 aa13.76□□□□□ -0.21
LMNB1-204ENST00000463908 OR10J6PQ8NGY7 276 aa13.76□□□□□ -0.21
LMNB1-204ENST00000463908 AGPAT4-IT1Q9H0P7 198 aa13.76□□□□□ -0.21
LMNB1-204ENST00000463908 OTORQ9NRC9 128 aa13.76□□□□□ -0.21
LMNB1-204ENST00000463908 BOLA1Q9Y3E2 137 aa13.76□□□□□ -0.21
LMNB1-204ENST00000463908 CRXO43186 299 aaPredicted RBP13.75□□□□□ -0.21
LMNB1-204ENST00000463908 CT45A10P0DMU9 189 aa13.75□□□□□ -0.21
LMNB1-204ENST00000463908 SPINK13Q1W4C9 94 aa13.75□□□□□ -0.21
LMNB1-204ENST00000463908 OR11H2Q8NH07 326 aa13.75□□□□□ -0.21
LMNB1-204ENST00000463908 MBD3L1Q8WWY6 194 aa13.75□□□□□ -0.21
LMNB1-204ENST00000463908 RARRES2Q99969 163 aa13.75□□□□□ -0.21
LMNB1-204ENST00000463908 C1QTNF4Q9BXJ3 329 aa13.75□□□□□ -0.21
LMNB1-204ENST00000463908 EDA2RQ9HAV5 297 aa13.75□□□□□ -0.21
LMNB1-204ENST00000463908 TMEM167BQ9NRX6 74 aa13.75□□□□□ -0.21
LMNB1-204ENST00000463908 IGKV2-40A0A087WW87 121 aaPredicted RBP13.74□□□□□ -0.21
LMNB1-204ENST00000463908 MAP1LC3B2A6NCE7 125 aa13.74□□□□□ -0.21
LMNB1-204ENST00000463908 M0R2Z0 102 aa13.74□□□□□ -0.21
LMNB1-204ENST00000463908 IGKV2D-40P01614 121 aaPredicted RBP13.74□□□□□ -0.21
LMNB1-204ENST00000463908 FAM213BQ8TBF2 198 aa13.74□□□□□ -0.21
LMNB1-204ENST00000463908 VGLL1Q99990 258 aa13.74□□□□□ -0.21
LMNB1-204ENST00000463908 MAP1LC3BQ9GZQ8 125 aa13.74□□□□□ -0.21
LMNB1-204ENST00000463908 X6R8D5 127 aa13.74□□□□□ -0.21
LMNB1-204ENST00000463908 ZNF705EA8MWA4 302 aaPredicted RBP13.73□□□□□ -0.21
LMNB1-204ENST00000463908 BOLA2-SMG1P6H3BVE0 249 aa13.73□□□□□ -0.21
LMNB1-204ENST00000463908 KIR3DS1Q14943 382 aa13.73□□□□□ -0.21
LMNB1-204ENST00000463908 DPPA3Q6W0C5 159 aa13.73□□□□□ -0.21
LMNB1-204ENST00000463908 C9orf47Q6ZRZ4 202 aa13.73□□□□□ -0.21
LMNB1-204ENST00000463908 C1orf158Q8N1D5 194 aa13.73□□□□□ -0.21
LMNB1-204ENST00000463908 TRAV12-2A0A075B6T6 113 aa13.72□□□□□ -0.21
LMNB1-204ENST00000463908 DIRC3C9JPN6 131 aa13.72□□□□□ -0.21
LMNB1-204ENST00000463908 EIF5AL1Q6IS14 154 aaKnown RBP13.72□□□□□ -0.21
LMNB1-204ENST00000463908 ZNF705AQ6ZN79 300 aaPredicted RBP13.72□□□□□ -0.21
LMNB1-204ENST00000463908 IQCF2Q8IXL9 164 aa13.72□□□□□ -0.21
LMNB1-204ENST00000463908 RXFP4Q8TDU9 374 aa13.72□□□□□ -0.21
LMNB1-204ENST00000463908 SFT2D1Q8WV19 159 aa13.72□□□□□ -0.21
LMNB1-204ENST00000463908 FAM19A4Q96LR4 140 aa13.72□□□□□ -0.21
LMNB1-204ENST00000463908 LINC00477Q96M19 166 aa13.72□□□□□ -0.21
LMNB1-204ENST00000463908 CSN1S1P47710 185 aa13.71□□□□□ -0.21
LMNB1-204ENST00000463908 SULT1A2P50226 295 aa13.71□□□□□ -0.21
LMNB1-204ENST00000463908 SUMO1P63165 101 aaKnown RBP13.71□□□□□ -0.21
LMNB1-204ENST00000463908 IGF2BP2-AS1Q96M15 143 aa13.71□□□□□ -0.21
LMNB1-204ENST00000463908 PPP1R14DQ9NXH3 145 aa13.71□□□□□ -0.21
LMNB1-204ENST00000463908 YTHDF2Q9Y5A9 579 aaKnown RBP13.71□□□□□ -0.21
LMNB1-204ENST00000463908 A0A1W2PRE2 83 aa13.7□□□□□ -0.22
LMNB1-204ENST00000463908 GGTLC3B5MD39 225 aa13.7□□□□□ -0.22
LMNB1-204ENST00000463908 AMBPP02760 352 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 106.4 ms