RNA–Protein interactions for RNA: ENST00000463315.1

SEMA3D-203, Transcript of semaphorin 3D, humanhuman

TSL 2

Gene SEMA3D, Length 1,257 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-203ENST00000463315 RNF141Q8WVD5 230 aa9.97□□□□□ -0.81
SEMA3D-203ENST00000463315 FXYD5Q96DB9 178 aa9.97□□□□□ -0.81
SEMA3D-203ENST00000463315 AAMDCQ9H7C9 122 aa9.97□□□□□ -0.81
SEMA3D-203ENST00000463315 A0A0D9SG52 128 aa9.96□□□□□ -0.82
SEMA3D-203ENST00000463315 ZNF705FA8MVS1 300 aaPredicted RBP9.96□□□□□ -0.82
SEMA3D-203ENST00000463315 OR7C2O60412 319 aa9.96□□□□□ -0.82
SEMA3D-203ENST00000463315 ZNF705DP0CH99 300 aaPredicted RBP9.96□□□□□ -0.82
SEMA3D-203ENST00000463315 ZNF705BP0CI00 300 aaPredicted RBP9.96□□□□□ -0.82
SEMA3D-203ENST00000463315 PYYP10082 97 aa9.96□□□□□ -0.82
SEMA3D-203ENST00000463315 DEFB1P60022 68 aa9.96□□□□□ -0.82
SEMA3D-203ENST00000463315 RPL7L1Q6DKI1 246 aaKnown RBP9.96□□□□□ -0.82
SEMA3D-203ENST00000463315 KCNRGQ8N5I3 272 aa9.96□□□□□ -0.82
SEMA3D-203ENST00000463315 OR10J6PQ8NGY7 276 aa9.96□□□□□ -0.82
SEMA3D-203ENST00000463315 ODF3Q96PU9 254 aa9.96□□□□□ -0.82
SEMA3D-203ENST00000463315 XCL2Q9UBD3 114 aa9.96□□□□□ -0.82
SEMA3D-203ENST00000463315 A0A0J9YWU9 116 aa9.95□□□□□ -0.82
SEMA3D-203ENST00000463315 IGKV3-20P01619 116 aa9.95□□□□□ -0.82
SEMA3D-203ENST00000463315 HLA-DMBP28068 263 aa9.95□□□□□ -0.82
SEMA3D-203ENST00000463315 HIST1H1AQ02539 215 aaPredicted RBP9.95□□□□□ -0.82
SEMA3D-203ENST00000463315 RPP25LQ8N5L8 163 aaKnown RBP9.95□□□□□ -0.82
SEMA3D-203ENST00000463315 ARL6IP6Q8N6S5 226 aa9.95□□□□□ -0.82
SEMA3D-203ENST00000463315 IGF2BP2-AS1Q96M15 143 aa9.95□□□□□ -0.82
SEMA3D-203ENST00000463315 SLC35B3Q9H1N7 401 aa9.95□□□□□ -0.82
SEMA3D-203ENST00000463315 H3BTX0 84 aa9.94□□□□□ -0.82
SEMA3D-203ENST00000463315 BOLA2-SMG1P6H3BVE0 249 aa9.94□□□□□ -0.82
SEMA3D-203ENST00000463315 SNRPCP09234 159 aaKnown RBP9.94□□□□□ -0.82
SEMA3D-203ENST00000463315 TSPOP30536 169 aa9.94□□□□□ -0.82
SEMA3D-203ENST00000463315 TCTE3Q8IZS6 198 aa9.94□□□□□ -0.82
SEMA3D-203ENST00000463315 Q8NAQ8 132 aa9.94□□□□□ -0.82
SEMA3D-203ENST00000463315 BLNKQ8WV28 456 aa9.94□□□□□ -0.82
SEMA3D-203ENST00000463315 ZNF503Q96F45 646 aa9.94□□□□□ -0.82
SEMA3D-203ENST00000463315 ST6GAL2Q96JF0 529 aa9.94□□□□□ -0.82
SEMA3D-203ENST00000463315 ARPC5LQ9BPX5 153 aa9.94□□□□□ -0.82
SEMA3D-203ENST00000463315 GOLT1BQ9Y3E0 138 aa9.94□□□□□ -0.82
SEMA3D-203ENST00000463315 X6R8D5 127 aa9.94□□□□□ -0.82
SEMA3D-203ENST00000463315 TMEM189A5PLL7 270 aa9.93□□□□□ -0.82
SEMA3D-203ENST00000463315 NPIPB6E9PJ23 425 aa9.93□□□□□ -0.82
SEMA3D-203ENST00000463315 OR10J4P0C629 311 aa9.93□□□□□ -0.82
SEMA3D-203ENST00000463315 STAG3L2P0CL84 134 aa9.93□□□□□ -0.82
SEMA3D-203ENST00000463315 STAG3L3P0CL85 134 aa9.93□□□□□ -0.82
SEMA3D-203ENST00000463315 CDKN1BP46527 198 aa9.93□□□□□ -0.82
SEMA3D-203ENST00000463315 CDC34P49427 236 aaPredicted RBP9.93□□□□□ -0.82
SEMA3D-203ENST00000463315 RAB2AP61019 212 aa9.93□□□□□ -0.82
SEMA3D-203ENST00000463315 UBE2L3P68036 154 aaKnown RBP9.93□□□□□ -0.82
SEMA3D-203ENST00000463315 CASC10Q5T4H9 136 aa9.93□□□□□ -0.82
SEMA3D-203ENST00000463315 TMEM256Q8N2U0 113 aa9.93□□□□□ -0.82
SEMA3D-203ENST00000463315 OR11H4Q8NGC9 324 aa9.93□□□□□ -0.82
SEMA3D-203ENST00000463315 LINC00477Q96M19 166 aa9.93□□□□□ -0.82
SEMA3D-203ENST00000463315 C20orf144Q9BQM9 153 aa9.93□□□□□ -0.82
SEMA3D-203ENST00000463315 CYTL1Q9NRR1 136 aa9.93□□□□□ -0.82
SEMA3D-203ENST00000463315 PPP1R14DQ9NXH3 145 aa9.93□□□□□ -0.82
SEMA3D-203ENST00000463315 RFNGQ9Y644 331 aa9.93□□□□□ -0.82
SEMA3D-203ENST00000463315 SMLR1H3BR10 107 aa9.92□□□□□ -0.82
SEMA3D-203ENST00000463315 INSP01308 110 aa9.92□□□□□ -0.82
SEMA3D-203ENST00000463315 EIF5AP63241 154 aaKnown RBP9.92□□□□□ -0.82
SEMA3D-203ENST00000463315 ICAM4Q14773 271 aa9.92□□□□□ -0.82
SEMA3D-203ENST00000463315 FAM74A1Q5RGS3 127 aa9.92□□□□□ -0.82
SEMA3D-203ENST00000463315 FAM122CQ6P4D5 195 aa9.92□□□□□ -0.82
SEMA3D-203ENST00000463315 SUN5Q8TC36 379 aa9.92□□□□□ -0.82
SEMA3D-203ENST00000463315 ACTR3CQ9C0K3 210 aaPredicted RBP9.92□□□□□ -0.82
SEMA3D-203ENST00000463315 SH3BGRL3Q9H299 93 aa9.92□□□□□ -0.82
SEMA3D-203ENST00000463315 CSMD3Q7Z407 3707 aa9.91□□□□□ -0.82
SEMA3D-203ENST00000463315 IGHV4-28A0A0C4DH34 117 aa9.91□□□□□ -0.82
SEMA3D-203ENST00000463315 TRBV7-9A0A0J9YWB2 115 aa9.91□□□□□ -0.82
SEMA3D-203ENST00000463315 RBAKDNA6NC62 111 aa9.91□□□□□ -0.82
SEMA3D-203ENST00000463315 PRAC2D3DTV9 90 aa9.91□□□□□ -0.82
SEMA3D-203ENST00000463315 M0R3E3 92 aa9.91□□□□□ -0.82
SEMA3D-203ENST00000463315 CRXO43186 299 aaPredicted RBP9.91□□□□□ -0.82
SEMA3D-203ENST00000463315 SLC25A5P05141 298 aaKnown RBP9.91□□□□□ -0.82
SEMA3D-203ENST00000463315 NMBP08949 121 aa9.91□□□□□ -0.82
SEMA3D-203ENST00000463315 CSN1S1P47710 185 aa9.91□□□□□ -0.82
SEMA3D-203ENST00000463315 SPINK13Q1W4C9 94 aa9.91□□□□□ -0.82
SEMA3D-203ENST00000463315 C9orf47Q6ZRZ4 202 aa9.91□□□□□ -0.82
SEMA3D-203ENST00000463315 C1orf158Q8N1D5 194 aa9.91□□□□□ -0.82
SEMA3D-203ENST00000463315 EXOC3-AS1Q8N2X6 119 aa9.91□□□□□ -0.82
SEMA3D-203ENST00000463315 RXFP4Q8TDU9 374 aa9.91□□□□□ -0.82
SEMA3D-203ENST00000463315 RAB24Q969Q5 203 aa9.91□□□□□ -0.82
SEMA3D-203ENST00000463315 PHYHIPLQ96FC7 376 aa9.91□□□□□ -0.82
SEMA3D-203ENST00000463315 LOC100996750A0A140TA64 210 aa9.9□□□□□ -0.82
SEMA3D-203ENST00000463315 KANTRA0A1W2PQU2 76 aa9.9□□□□□ -0.82
SEMA3D-203ENST00000463315 FAM229AH3BQW9 127 aa9.9□□□□□ -0.82
SEMA3D-203ENST00000463315 M0R2Z0 102 aa9.9□□□□□ -0.82
SEMA3D-203ENST00000463315 BCL2L11O43521 198 aa9.9□□□□□ -0.82
SEMA3D-203ENST00000463315 CXorf1O96002 111 aa9.9□□□□□ -0.82
SEMA3D-203ENST00000463315 SEC11BP0C7V7 166 aa9.9□□□□□ -0.82
SEMA3D-203ENST00000463315 RBMY1A1P0DJD3 496 aaKnown RBP9.9□□□□□ -0.82
SEMA3D-203ENST00000463315 RBMY1CP0DJD4 496 aa9.9□□□□□ -0.82
SEMA3D-203ENST00000463315 FXYD7P58549 80 aa9.9□□□□□ -0.82
SEMA3D-203ENST00000463315 RANP62826 216 aaKnown RBP9.9□□□□□ -0.82
SEMA3D-203ENST00000463315 RBMY1FQ15415 496 aaKnown RBP9.9□□□□□ -0.82
SEMA3D-203ENST00000463315 AKR1C8PQ5T2L2 129 aa9.9□□□□□ -0.82
SEMA3D-203ENST00000463315 KRTAP4-6Q9BYQ5 205 aa9.9□□□□□ -0.82
SEMA3D-203ENST00000463315 Q9H3A6 140 aa9.9□□□□□ -0.82
SEMA3D-203ENST00000463315 TMEM167BQ9NRX6 74 aa9.9□□□□□ -0.82
SEMA3D-203ENST00000463315 TENM2Q9NT68 2774 aa9.9□□□□□ -0.83
SEMA3D-203ENST00000463315 TEX48A0A1B0GUV7 120 aa9.89□□□□□ -0.83
SEMA3D-203ENST00000463315 HBE1P02100 147 aa9.89□□□□□ -0.83
SEMA3D-203ENST00000463315 C1QBP02746 253 aa9.89□□□□□ -0.83
SEMA3D-203ENST00000463315 ARL14EPLP0DKL9 152 aa9.89□□□□□ -0.83
SEMA3D-203ENST00000463315 LEPP41159 167 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms