RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 CST9LP1Q5W188 147 aa10.69□□□□□ -0.7
COL6A1-202ENST00000463060 FAM110AQ9BQ89 295 aa10.69□□□□□ -0.7
COL6A1-202ENST00000463060 GPR61Q9BZJ8 451 aa10.69□□□□□ -0.7
COL6A1-202ENST00000463060 C19orf73Q9NVV2 129 aa10.69□□□□□ -0.7
COL6A1-202ENST00000463060 ZNF705FA8MVS1 300 aaPredicted RBP10.68□□□□□ -0.7
COL6A1-202ENST00000463060 C9JQL5 133 aa10.68□□□□□ -0.7
COL6A1-202ENST00000463060 C11orf94C9JXX5 98 aa10.68□□□□□ -0.7
COL6A1-202ENST00000463060 ZNF688P0C7X2 276 aa10.68□□□□□ -0.7
COL6A1-202ENST00000463060 GUCA2BQ16661 112 aa10.68□□□□□ -0.7
COL6A1-202ENST00000463060 ODF3L2Q3SX64 289 aa10.68□□□□□ -0.7
COL6A1-202ENST00000463060 TOR2AQ5JU69 321 aa10.68□□□□□ -0.7
COL6A1-202ENST00000463060 SAMD5Q5TGI4 173 aa10.68□□□□□ -0.7
COL6A1-202ENST00000463060 EIF4E3Q8N5X7 224 aaKnown RBP10.68□□□□□ -0.7
COL6A1-202ENST00000463060 C5orf17Q8NAS9 161 aa10.68□□□□□ -0.7
COL6A1-202ENST00000463060 AAMDCQ9H7C9 122 aa10.68□□□□□ -0.7
COL6A1-202ENST00000463060 EPDR1Q9UM22 224 aa10.68□□□□□ -0.7
COL6A1-202ENST00000463060 PRAC2D3DTV9 90 aa10.67□□□□□ -0.7
COL6A1-202ENST00000463060 RXFP4Q8TDU9 374 aa10.67□□□□□ -0.7
COL6A1-202ENST00000463060 C11orf52Q96A22 123 aa10.67□□□□□ -0.7
COL6A1-202ENST00000463060 TCEAL7Q9BRU2 100 aa10.67□□□□□ -0.7
COL6A1-202ENST00000463060 SMDT1Q9H4I9 107 aa10.67□□□□□ -0.7
COL6A1-202ENST00000463060 MAP6D1Q9H9H5 199 aa10.67□□□□□ -0.7
COL6A1-202ENST00000463060 NBEAL1Q6ZS30 2694 aa10.67□□□□□ -0.7
COL6A1-202ENST00000463060 DIRC3C9JPN6 131 aa10.66□□□□□ -0.7
COL6A1-202ENST00000463060 TCRAP04437 139 aa10.66□□□□□ -0.7
COL6A1-202ENST00000463060 SLC25A5P05141 298 aaKnown RBP10.66□□□□□ -0.7
COL6A1-202ENST00000463060 SRP19P09132 144 aaKnown RBP10.66□□□□□ -0.7
COL6A1-202ENST00000463060 CD7P09564 240 aa10.66□□□□□ -0.7
COL6A1-202ENST00000463060 SNRPD3P62318 126 aaKnown RBP10.66□□□□□ -0.7
COL6A1-202ENST00000463060 RPUSD4Q96CM3 377 aaKnown RBP10.66□□□□□ -0.7
COL6A1-202ENST00000463060 LINC00052Q96N35 136 aa10.66□□□□□ -0.7
COL6A1-202ENST00000463060 EIF5A2Q9GZV4 153 aaKnown RBP10.66□□□□□ -0.7
COL6A1-202ENST00000463060 G3V4G9 280 aa10.65□□□□□ -0.7
COL6A1-202ENST00000463060 TMEM250H0YL14 139 aa10.65□□□□□ -0.7
COL6A1-202ENST00000463060 PDE6DO43924 150 aa10.65□□□□□ -0.7
COL6A1-202ENST00000463060 CMC4P56277 68 aaPredicted RBP10.65□□□□□ -0.7
COL6A1-202ENST00000463060 DEFB131AP59861 70 aa10.65□□□□□ -0.7
COL6A1-202ENST00000463060 DEFB1P60022 68 aa10.65□□□□□ -0.7
COL6A1-202ENST00000463060 KRTAP10-11P60412 298 aa10.65□□□□□ -0.7
COL6A1-202ENST00000463060 GNG5P63218 68 aa10.65□□□□□ -0.7
COL6A1-202ENST00000463060 PSMG4Q5JS54 123 aa10.65□□□□□ -0.7
COL6A1-202ENST00000463060 C2CD4CQ8TF44 421 aa10.65□□□□□ -0.7
COL6A1-202ENST00000463060 HIST1H2BAQ96A08 127 aa10.65□□□□□ -0.7
COL6A1-202ENST00000463060 KLF12Q9Y4X4 402 aa10.65□□□□□ -0.7
COL6A1-202ENST00000463060 A0A0J9YX75 114 aa10.64□□□□□ -0.71
COL6A1-202ENST00000463060 SCO2A0A1W2PP80 73 aa10.64□□□□□ -0.71
COL6A1-202ENST00000463060 RBAKDNA6NC62 111 aa10.64□□□□□ -0.71
COL6A1-202ENST00000463060 A8MTW9 85 aa10.64□□□□□ -0.71
COL6A1-202ENST00000463060 F6UZH7 168 aa10.64□□□□□ -0.71
COL6A1-202ENST00000463060 PEX7O00628 323 aa10.64□□□□□ -0.71
COL6A1-202ENST00000463060 IGLV2-11P01706 119 aa10.64□□□□□ -0.71
COL6A1-202ENST00000463060 PRB4P10163 310 aaPredicted RBP10.64□□□□□ -0.71
COL6A1-202ENST00000463060 PEA15Q15121 130 aa10.64□□□□□ -0.71
COL6A1-202ENST00000463060 COMMD7Q86VX2 200 aa10.64□□□□□ -0.71
COL6A1-202ENST00000463060 Q8N1Y9 231 aa10.64□□□□□ -0.71
COL6A1-202ENST00000463060 ZNF738Q8NE65 137 aa10.64□□□□□ -0.71
COL6A1-202ENST00000463060 CMTM2Q8TAZ6 248 aa10.64□□□□□ -0.71
COL6A1-202ENST00000463060 ATG101Q9BSB4 218 aa10.64□□□□□ -0.71
COL6A1-202ENST00000463060 F6UB75 175 aa10.63□□□□□ -0.71
COL6A1-202ENST00000463060 CSN1S1P47710 185 aa10.63□□□□□ -0.71
COL6A1-202ENST00000463060 KPRPQ5T749 579 aaPredicted RBP10.63□□□□□ -0.71
COL6A1-202ENST00000463060 GDF5OSQ5U4N7 250 aa10.63□□□□□ -0.71
COL6A1-202ENST00000463060 UQCC3Q6UW78 93 aa10.63□□□□□ -0.71
COL6A1-202ENST00000463060 C9orf47Q6ZRZ4 202 aa10.63□□□□□ -0.71
COL6A1-202ENST00000463060 GOLT1AQ6ZVE7 132 aa10.63□□□□□ -0.71
COL6A1-202ENST00000463060 OR8A1Q8NGG7 326 aa10.63□□□□□ -0.71
COL6A1-202ENST00000463060 LINC00479Q96M42 142 aa10.63□□□□□ -0.71
COL6A1-202ENST00000463060 SAV1Q9H4B6 383 aaPredicted RBP10.63□□□□□ -0.71
COL6A1-202ENST00000463060 IGKV2-40A0A087WW87 121 aaPredicted RBP10.62□□□□□ -0.71
COL6A1-202ENST00000463060 SERTM2A0A1B0GWG4 89 aa10.62□□□□□ -0.71
COL6A1-202ENST00000463060 OR11H12B2RN74 326 aa10.62□□□□□ -0.71
COL6A1-202ENST00000463060 NPIPB6E9PJ23 425 aa10.62□□□□□ -0.71
COL6A1-202ENST00000463060 IGKV2D-40P01614 121 aaPredicted RBP10.62□□□□□ -0.71
COL6A1-202ENST00000463060 ZNF124Q15973 351 aa10.62□□□□□ -0.71
COL6A1-202ENST00000463060 FOXI2Q6ZQN5 318 aa10.62□□□□□ -0.71
COL6A1-202ENST00000463060 CYB561D1Q8N8Q1 229 aa10.62□□□□□ -0.71
COL6A1-202ENST00000463060 CITED4Q96RK1 184 aa10.62□□□□□ -0.71
COL6A1-202ENST00000463060 VGLL1Q99990 258 aa10.62□□□□□ -0.71
COL6A1-202ENST00000463060 AGPAT4-IT1Q9H0P7 198 aa10.62□□□□□ -0.71
COL6A1-202ENST00000463060 SLC35B3Q9H1N7 401 aa10.62□□□□□ -0.71
COL6A1-202ENST00000463060 PPP1R14DQ9NXH3 145 aa10.62□□□□□ -0.71
COL6A1-202ENST00000463060 MGAM2Q2M2H8 2515 aa10.62□□□□□ -0.71
COL6A1-202ENST00000463060 TRBV6-1A0A0K0K1D8 114 aa10.61□□□□□ -0.71
COL6A1-202ENST00000463060 H3BMM0 161 aa10.61□□□□□ -0.71
COL6A1-202ENST00000463060 ZNF705DP0CH99 300 aaPredicted RBP10.61□□□□□ -0.71
COL6A1-202ENST00000463060 ZNF705BP0CI00 300 aaPredicted RBP10.61□□□□□ -0.71
COL6A1-202ENST00000463060 ERCC8Q13216 396 aa10.61□□□□□ -0.71
COL6A1-202ENST00000463060 APRG1Q8IVJ8 170 aa10.61□□□□□ -0.71
COL6A1-202ENST00000463060 SLC7A5P1Q8MH63 180 aa10.61□□□□□ -0.71
COL6A1-202ENST00000463060 TMEM75Q8N9X5 138 aa10.61□□□□□ -0.71
COL6A1-202ENST00000463060 CLUHP3Q96NS8 147 aa10.61□□□□□ -0.71
COL6A1-202ENST00000463060 DERL1Q9BUN8 251 aa10.61□□□□□ -0.71
COL6A1-202ENST00000463060 ZMAT5Q9UDW3 170 aaKnown RBP10.61□□□□□ -0.71
COL6A1-202ENST00000463060 AGRNO00468 2067 aa10.61□□□□□ -0.71
COL6A1-202ENST00000463060 TRAV8-1A0A0A6YYK1 113 aa10.6□□□□□ -0.71
COL6A1-202ENST00000463060 KNCNA6PVL3 124 aa10.6□□□□□ -0.71
COL6A1-202ENST00000463060 HLA-DRB4P13762 266 aa10.6□□□□□ -0.71
COL6A1-202ENST00000463060 NDUFA5Q16718 116 aa10.6□□□□□ -0.71
COL6A1-202ENST00000463060 TMEM183BQ1AE95 376 aa10.6□□□□□ -0.71
COL6A1-202ENST00000463060 FAM19A4Q96LR4 140 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms