RNA–Protein interactions for RNA: ENST00000462970.5

PSMD4-208, Transcript of proteasome 26S subunit, non-ATPase 4, human

TSL 5

Gene PSMD4, Length 900 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD4-208	ENST00000462970	EXOC3-AS1	Q8N2X6	119 aa		6.98	□□□□□ -1.29
PSMD4-208	ENST00000462970	CSNK1G2-AS1	Q8NCQ2	148 aa		6.98	□□□□□ -1.29
PSMD4-208	ENST00000462970	RNF141	Q8WVD5	230 aa		6.98	□□□□□ -1.29
PSMD4-208	ENST00000462970	FAM167A-AS1	Q96KT0	104 aa		6.98	□□□□□ -1.29
PSMD4-208	ENST00000462970	PARD6G	Q9BYG4	376 aa	Predicted RBP	6.98	□□□□□ -1.29
PSMD4-208	ENST00000462970	AAMDC	Q9H7C9	122 aa		6.98	□□□□□ -1.29
PSMD4-208	ENST00000462970	hCG_2014768	A0A024R1R8	64 aa		6.97	□□□□□ -1.29
PSMD4-208	ENST00000462970	TRAV12-2	A0A075B6T6	113 aa		6.97	□□□□□ -1.29
PSMD4-208	ENST00000462970	RNF222	A6NCQ9	220 aa		6.97	□□□□□ -1.29
PSMD4-208	ENST00000462970	BOLA2-SMG1P6	H3BVE0	249 aa		6.97	□□□□□ -1.29
PSMD4-208	ENST00000462970		J3KRW8	73 aa		6.97	□□□□□ -1.29
PSMD4-208	ENST00000462970		M0R3E3	92 aa		6.97	□□□□□ -1.29
PSMD4-208	ENST00000462970	INS	P01308	110 aa		6.97	□□□□□ -1.29
PSMD4-208	ENST00000462970	AMBP	P02760	352 aa		6.97	□□□□□ -1.29
PSMD4-208	ENST00000462970	RBMY1A1	P0DJD3	496 aa	Known RBP	6.97	□□□□□ -1.29
PSMD4-208	ENST00000462970	RBMY1C	P0DJD4	496 aa		6.97	□□□□□ -1.29
PSMD4-208	ENST00000462970	MIF	P14174	115 aa		6.97	□□□□□ -1.29
PSMD4-208	ENST00000462970	M6PR	P20645	277 aa		6.97	□□□□□ -1.29
PSMD4-208	ENST00000462970	ATP6V0C	P27449	155 aa		6.97	□□□□□ -1.29
PSMD4-208	ENST00000462970	NANOS2	P60321	138 aa	Known RBP	6.97	□□□□□ -1.29
PSMD4-208	ENST00000462970	ICAM4	Q14773	271 aa		6.97	□□□□□ -1.29
PSMD4-208	ENST00000462970	RBMY1F	Q15415	496 aa	Known RBP	6.97	□□□□□ -1.29
PSMD4-208	ENST00000462970	RPL7L1	Q6DKI1	246 aa	Known RBP	6.97	□□□□□ -1.29
PSMD4-208	ENST00000462970	AMTN	Q6UX39	209 aa		6.97	□□□□□ -1.29
PSMD4-208	ENST00000462970		Q8NAQ8	132 aa		6.97	□□□□□ -1.29
PSMD4-208	ENST00000462970	OR10G4	Q8NGN3	311 aa		6.97	□□□□□ -1.29
PSMD4-208	ENST00000462970	OR10G9	Q8NGN4	311 aa		6.97	□□□□□ -1.29
PSMD4-208	ENST00000462970	OR10G7	Q8NGN6	311 aa		6.97	□□□□□ -1.29
PSMD4-208	ENST00000462970	C11orf45	Q8TAV5	145 aa		6.97	□□□□□ -1.29
PSMD4-208	ENST00000462970	SAT2	Q96F10	170 aa	Predicted RBP	6.97	□□□□□ -1.29
PSMD4-208	ENST00000462970	CLUHP3	Q96NS8	147 aa		6.97	□□□□□ -1.29
PSMD4-208	ENST00000462970	SH3BGRL3	Q9H299	93 aa		6.97	□□□□□ -1.29
PSMD4-208	ENST00000462970	C11orf68	Q9H3H3	251 aa	Known RBP	6.97	□□□□□ -1.29
PSMD4-208	ENST00000462970		X6R8D5	127 aa		6.97	□□□□□ -1.29
PSMD4-208	ENST00000462970	ZNF253	O75346	499 aa		6.96	□□□□□ -1.3
PSMD4-208	ENST00000462970	NDUFB4	O95168	129 aa		6.96	□□□□□ -1.3
PSMD4-208	ENST00000462970	RAN	P62826	216 aa	Known RBP	6.96	□□□□□ -1.3
PSMD4-208	ENST00000462970	ERCC8	Q13216	396 aa		6.96	□□□□□ -1.3
PSMD4-208	ENST00000462970	IQCF2	Q8IXL9	164 aa		6.96	□□□□□ -1.3
PSMD4-208	ENST00000462970	FXYD5	Q96DB9	178 aa		6.96	□□□□□ -1.3
PSMD4-208	ENST00000462970	PHYHIPL	Q96FC7	376 aa		6.96	□□□□□ -1.3
PSMD4-208	ENST00000462970	IGF2BP2-AS1	Q96M15	143 aa		6.96	□□□□□ -1.3
PSMD4-208	ENST00000462970	RPH3AL	Q9UNE2	315 aa		6.96	□□□□□ -1.3
PSMD4-208	ENST00000462970	DNAH7	Q8WXX0	4024 aa		6.96	□□□□□ -1.3
PSMD4-208	ENST00000462970	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	6.95	□□□□□ -1.3
PSMD4-208	ENST00000462970	ZNF705G	A8MUZ8	300 aa	Predicted RBP	6.95	□□□□□ -1.3
PSMD4-208	ENST00000462970	ZNF705E	A8MWA4	302 aa	Predicted RBP	6.95	□□□□□ -1.3
PSMD4-208	ENST00000462970		G3V3Q6	166 aa		6.95	□□□□□ -1.3
PSMD4-208	ENST00000462970	IGKV2D-40	P01614	121 aa	Predicted RBP	6.95	□□□□□ -1.3
PSMD4-208	ENST00000462970	HBE1	P02100	147 aa		6.95	□□□□□ -1.3
PSMD4-208	ENST00000462970	HTN1	P15515	57 aa		6.95	□□□□□ -1.3
PSMD4-208	ENST00000462970	TSPO	P30536	169 aa		6.95	□□□□□ -1.3
PSMD4-208	ENST00000462970	CDC34	P49427	236 aa	Predicted RBP	6.95	□□□□□ -1.3
PSMD4-208	ENST00000462970	PDE6H	Q13956	83 aa		6.95	□□□□□ -1.3
PSMD4-208	ENST00000462970	RPP25L	Q8N5L8	163 aa	Known RBP	6.95	□□□□□ -1.3
PSMD4-208	ENST00000462970	OR2G3	Q8NGZ4	309 aa		6.95	□□□□□ -1.3
PSMD4-208	ENST00000462970	GNPNAT1	Q96EK6	184 aa	Predicted RBP	6.95	□□□□□ -1.3
PSMD4-208	ENST00000462970	HYLS1	Q96M11	299 aa		6.95	□□□□□ -1.3
PSMD4-208	ENST00000462970	LINC01587	Q99440	93 aa		6.95	□□□□□ -1.3
PSMD4-208	ENST00000462970	PRELID1	Q9Y255	219 aa		6.95	□□□□□ -1.3
PSMD4-208	ENST00000462970	LOC102723971	A0A1B0GUV8	181 aa		6.94	□□□□□ -1.3
PSMD4-208	ENST00000462970		A8MTW9	85 aa		6.94	□□□□□ -1.3
PSMD4-208	ENST00000462970	MB	P02144	154 aa		6.94	□□□□□ -1.3
PSMD4-208	ENST00000462970	ARL14EPL	P0DKL9	152 aa		6.94	□□□□□ -1.3
PSMD4-208	ENST00000462970	LEP	P41159	167 aa		6.94	□□□□□ -1.3
PSMD4-208	ENST00000462970	CSN1S1	P47710	185 aa		6.94	□□□□□ -1.3
PSMD4-208	ENST00000462970	RRN3P1	Q2M238	152 aa		6.94	□□□□□ -1.3
PSMD4-208	ENST00000462970	ZNF705A	Q6ZN79	300 aa	Predicted RBP	6.94	□□□□□ -1.3
PSMD4-208	ENST00000462970	ZNF767P	Q75MW2	155 aa		6.94	□□□□□ -1.3
PSMD4-208	ENST00000462970	C1orf158	Q8N1D5	194 aa		6.94	□□□□□ -1.3
PSMD4-208	ENST00000462970	PHLDA1	Q8WV24	401 aa	Predicted RBP	6.94	□□□□□ -1.3
PSMD4-208	ENST00000462970	ZNF503	Q96F45	646 aa		6.94	□□□□□ -1.3
PSMD4-208	ENST00000462970	PSMG3	Q9BT73	122 aa	Predicted RBP	6.94	□□□□□ -1.3
PSMD4-208	ENST00000462970	ACTR3C	Q9C0K3	210 aa	Predicted RBP	6.94	□□□□□ -1.3
PSMD4-208	ENST00000462970		Q9H3A6	140 aa		6.94	□□□□□ -1.3
PSMD4-208	ENST00000462970	NUPR2	A6NF83	97 aa		6.93	□□□□□ -1.3
PSMD4-208	ENST00000462970	SMIM9	A6NGZ8	99 aa		6.93	□□□□□ -1.3
PSMD4-208	ENST00000462970	NPIPB6	E9PJ23	425 aa		6.93	□□□□□ -1.3
PSMD4-208	ENST00000462970	TAAR5	O14804	337 aa		6.93	□□□□□ -1.3
PSMD4-208	ENST00000462970	CRX	O43186	299 aa	Predicted RBP	6.93	□□□□□ -1.3
PSMD4-208	ENST00000462970	PFDN1	O60925	122 aa		6.93	□□□□□ -1.3
PSMD4-208	ENST00000462970	JTB	O76095	146 aa		6.93	□□□□□ -1.3
PSMD4-208	ENST00000462970	PRM2	P04554	102 aa		6.93	□□□□□ -1.3
PSMD4-208	ENST00000462970	CT45A10	P0DMU9	189 aa		6.93	□□□□□ -1.3
PSMD4-208	ENST00000462970	CDKN1B	P46527	198 aa		6.93	□□□□□ -1.3
PSMD4-208	ENST00000462970	AKR1C8P	Q5T2L2	129 aa		6.93	□□□□□ -1.3
PSMD4-208	ENST00000462970	TMEM78	Q5T7P6	136 aa		6.93	□□□□□ -1.3
PSMD4-208	ENST00000462970	CEMP1	Q6PRD7	247 aa	Predicted RBP	6.93	□□□□□ -1.3
PSMD4-208	ENST00000462970	PQLC2	Q6ZP29	291 aa		6.93	□□□□□ -1.3
PSMD4-208	ENST00000462970	CMTM2	Q8TAZ6	248 aa		6.93	□□□□□ -1.3
PSMD4-208	ENST00000462970	RAB24	Q969Q5	203 aa		6.93	□□□□□ -1.3
PSMD4-208	ENST00000462970	MRPL53	Q96EL3	112 aa	Known RBP	6.93	□□□□□ -1.3
PSMD4-208	ENST00000462970	ARPC5L	Q9BPX5	153 aa		6.93	□□□□□ -1.3
PSMD4-208	ENST00000462970	CELA1	Q9UNI1	258 aa		6.93	□□□□□ -1.3
PSMD4-208	ENST00000462970	TRAV12-3	A0A0B4J271	114 aa		6.92	□□□□□ -1.3
PSMD4-208	ENST00000462970	KANTR	A0A1W2PQU2	76 aa		6.92	□□□□□ -1.3
PSMD4-208	ENST00000462970	TMEM189	A5PLL7	270 aa		6.92	□□□□□ -1.3
PSMD4-208	ENST00000462970	RNASE4	P34096	147 aa	Known RBP	6.92	□□□□□ -1.3
PSMD4-208	ENST00000462970	SERF2	P84101	59 aa		6.92	□□□□□ -1.3
PSMD4-208	ENST00000462970	KIR3DS1	Q14943	382 aa		6.92	□□□□□ -1.3

Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms