RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 PPT1P50897 306 aa5.58□□□□□ -1.52
UBE4B-204ENST00000462658 KHDC3LQ587J8 217 aa5.58□□□□□ -1.52
UBE4B-204ENST00000462658 ZNF506Q5JVG8 444 aa5.58□□□□□ -1.52
UBE4B-204ENST00000462658 C10orf99Q6UWK7 81 aa5.58□□□□□ -1.52
UBE4B-204ENST00000462658 ZNF600Q6ZNG1 722 aa5.58□□□□□ -1.52
UBE4B-204ENST00000462658 S100A7AQ86SG5 101 aa5.58□□□□□ -1.52
UBE4B-204ENST00000462658 OR4X2Q8NGF9 303 aa5.58□□□□□ -1.52
UBE4B-204ENST00000462658 RXFP4Q8TDU9 374 aa5.58□□□□□ -1.52
UBE4B-204ENST00000462658 NARS2Q96I59 477 aaKnown RBP5.58□□□□□ -1.52
UBE4B-204ENST00000462658 UHRF2Q96PU4 802 aa5.58□□□□□ -1.52
UBE4B-204ENST00000462658 MRPL27Q9P0M9 148 aaKnown RBP5.58□□□□□ -1.52
UBE4B-204ENST00000462658 PUS1Q9Y606 427 aaKnown RBP eCLIP5.58□□□□□ -1.52
UBE4B-204ENST00000462658 TRRAPQ9Y4A5 3859 aa5.58□□□□□ -1.52
UBE4B-204ENST00000462658 COL6A5A8TX70 2615 aa5.57□□□□□ -1.52
UBE4B-204ENST00000462658 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.57□□□□□ -1.52
UBE4B-204ENST00000462658 IGHV3-35A0A0C4DH35 117 aa5.57□□□□□ -1.52
UBE4B-204ENST00000462658 TMEM218A2RU14 115 aa5.57□□□□□ -1.52
UBE4B-204ENST00000462658 KRBOX1C9JBD0 128 aa5.57□□□□□ -1.52
UBE4B-204ENST00000462658 C9JQL5 133 aa5.57□□□□□ -1.52
UBE4B-204ENST00000462658 PPP5D1E7EU14 171 aa5.57□□□□□ -1.52
UBE4B-204ENST00000462658 OR7C2O60412 319 aa5.57□□□□□ -1.52
UBE4B-204ENST00000462658 BCL2P10415 239 aa5.57□□□□□ -1.52
UBE4B-204ENST00000462658 TAGLN2P37802 199 aaKnown RBP5.57□□□□□ -1.52
UBE4B-204ENST00000462658 RIPPLY3P57055 190 aa5.57□□□□□ -1.52
UBE4B-204ENST00000462658 SNRPEP62304 92 aaKnown RBP5.57□□□□□ -1.52
UBE4B-204ENST00000462658 CTAG1AP78358 180 aa5.57□□□□□ -1.52
UBE4B-204ENST00000462658 KIAA0141Q14154 515 aaPredicted RBP5.57□□□□□ -1.52
UBE4B-204ENST00000462658 USF2Q15853 346 aaPredicted RBP5.57□□□□□ -1.52
UBE4B-204ENST00000462658 ZNF343Q6P1L6 599 aa5.57□□□□□ -1.52
UBE4B-204ENST00000462658 TOMM20LQ6UXN7 152 aa5.57□□□□□ -1.52
UBE4B-204ENST00000462658 OR5AU1Q8NGC0 362 aa5.57□□□□□ -1.52
UBE4B-204ENST00000462658 FAM167A-AS1Q96KT0 104 aa5.57□□□□□ -1.52
UBE4B-204ENST00000462658 LINC00052Q96N35 136 aa5.57□□□□□ -1.52
UBE4B-204ENST00000462658 PAXXQ9BUH6 204 aa5.57□□□□□ -1.52
UBE4B-204ENST00000462658 SLC25A2Q9BXI2 301 aa5.57□□□□□ -1.52
UBE4B-204ENST00000462658 SLC25A39Q9BZJ4 359 aaPredicted RBP5.57□□□□□ -1.52
UBE4B-204ENST00000462658 OR51M1Q9H341 326 aa5.57□□□□□ -1.52
UBE4B-204ENST00000462658 SMDT1Q9H4I9 107 aa5.57□□□□□ -1.52
UBE4B-204ENST00000462658 MANBALQ9NQG1 85 aa5.57□□□□□ -1.52
UBE4B-204ENST00000462658 TMEM167BQ9NRX6 74 aa5.57□□□□□ -1.52
UBE4B-204ENST00000462658 VAX2Q9UIW0 290 aa5.57□□□□□ -1.52
UBE4B-204ENST00000462658 H3BRN7 92 aa5.56□□□□□ -1.52
UBE4B-204ENST00000462658 CRLF1O75462 422 aa5.56□□□□□ -1.52
UBE4B-204ENST00000462658 TRBV12-3P01733 135 aa5.56□□□□□ -1.52
UBE4B-204ENST00000462658 HSPB1P04792 205 aaKnown RBP5.56□□□□□ -1.52
UBE4B-204ENST00000462658 SRP19P09132 144 aaKnown RBP5.56□□□□□ -1.52
UBE4B-204ENST00000462658 OR10J4P0C629 311 aa5.56□□□□□ -1.52
UBE4B-204ENST00000462658 SFTA3P0C7M3 94 aa5.56□□□□□ -1.52
UBE4B-204ENST00000462658 ZP3P21754 424 aa5.56□□□□□ -1.52
UBE4B-204ENST00000462658 S100A7P31151 101 aa5.56□□□□□ -1.52
UBE4B-204ENST00000462658 LINC01547P58512 204 aaPredicted RBP5.56□□□□□ -1.52
UBE4B-204ENST00000462658 UBE2G2P60604 165 aa5.56□□□□□ -1.52
UBE4B-204ENST00000462658 CST9LP1Q5W188 147 aa5.56□□□□□ -1.52
UBE4B-204ENST00000462658 LEMD1Q68G75 181 aa5.56□□□□□ -1.52
UBE4B-204ENST00000462658 KLHDC1Q8N7A1 406 aa5.56□□□□□ -1.52
UBE4B-204ENST00000462658 STXBP6Q8NFX7 210 aa5.56□□□□□ -1.52
UBE4B-204ENST00000462658 ZNF414Q96IQ9 312 aa5.56□□□□□ -1.52
UBE4B-204ENST00000462658 C17orf77Q96MU5 243 aa5.56□□□□□ -1.52
UBE4B-204ENST00000462658 OR5B12Q96R08 314 aa5.56□□□□□ -1.52
UBE4B-204ENST00000462658 SHANK2-AS3Q9BTD1 123 aa5.56□□□□□ -1.52
UBE4B-204ENST00000462658 SLC35B3Q9H1N7 401 aa5.56□□□□□ -1.52
UBE4B-204ENST00000462658 C16orf95Q9H693 158 aa5.56□□□□□ -1.52
UBE4B-204ENST00000462658 PEF1Q9UBV8 284 aaKnown RBP5.56□□□□□ -1.52
UBE4B-204ENST00000462658 RABAC1Q9UI14 185 aa5.56□□□□□ -1.52
UBE4B-204ENST00000462658 PRELID1Q9Y255 219 aa5.56□□□□□ -1.52
UBE4B-204ENST00000462658 DNAH3Q8TD57 4116 aa5.55□□□□□ -1.52
UBE4B-204ENST00000462658 ZNF98A6NK75 572 aa5.55□□□□□ -1.52
UBE4B-204ENST00000462658 C11orf94C9JXX5 98 aa5.55□□□□□ -1.52
UBE4B-204ENST00000462658 F8W036 122 aa5.55□□□□□ -1.52
UBE4B-204ENST00000462658 NDUFA4O00483 81 aa5.55□□□□□ -1.52
UBE4B-204ENST00000462658 TCF21O43680 179 aa5.55□□□□□ -1.52
UBE4B-204ENST00000462658 GGCTO75223 188 aaKnown RBP5.55□□□□□ -1.52
UBE4B-204ENST00000462658 PYYP10082 97 aa5.55□□□□□ -1.52
UBE4B-204ENST00000462658 UBE2L3P68036 154 aaKnown RBP5.55□□□□□ -1.52
UBE4B-204ENST00000462658 MEF2BQ02080 365 aaPredicted RBP5.55□□□□□ -1.52
UBE4B-204ENST00000462658 GAGE2BQ13066 116 aa5.55□□□□□ -1.52
UBE4B-204ENST00000462658 GAGE5Q13069 117 aa5.55□□□□□ -1.52
UBE4B-204ENST00000462658 GAGE6Q13070 117 aa5.55□□□□□ -1.52
UBE4B-204ENST00000462658 KRTAP21-3Q3LHN1 58 aa5.55□□□□□ -1.52
UBE4B-204ENST00000462658 GAGE2EQ4V326 116 aa5.55□□□□□ -1.52
UBE4B-204ENST00000462658 SMUG1Q53HV7 270 aa5.55□□□□□ -1.52
UBE4B-204ENST00000462658 GAGE2AQ6NT46 116 aa5.55□□□□□ -1.52
UBE4B-204ENST00000462658 OR4F5Q8NH21 305 aa5.55□□□□□ -1.52
UBE4B-204ENST00000462658 SUN5Q8TC36 379 aa5.55□□□□□ -1.52
UBE4B-204ENST00000462658 MYOZ3Q8TDC0 251 aa5.55□□□□□ -1.52
UBE4B-204ENST00000462658 UBE2E2Q96LR5 201 aa5.55□□□□□ -1.52
UBE4B-204ENST00000462658 OR4F4Q96R69 305 aa5.55□□□□□ -1.52
UBE4B-204ENST00000462658 TMEM14CQ9P0S9 112 aa5.55□□□□□ -1.52
UBE4B-204ENST00000462658 GAGE2DQ9UEU5 116 aa5.55□□□□□ -1.52
UBE4B-204ENST00000462658 RNF24Q9Y225 148 aa5.55□□□□□ -1.52
UBE4B-204ENST00000462658 IGHV3OR16-8A0A075B7F1 116 aa5.54□□□□□ -1.52
UBE4B-204ENST00000462658 FAM74A7A6NL05 159 aa5.54□□□□□ -1.52
UBE4B-204ENST00000462658 NDUFS6O75380 124 aaKnown RBP5.54□□□□□ -1.52
UBE4B-204ENST00000462658 NDUFA7O95182 113 aa5.54□□□□□ -1.52
UBE4B-204ENST00000462658 LGALS1P09382 135 aaKnown RBP5.54□□□□□ -1.52
UBE4B-204ENST00000462658 NBEAP1P0C6P0 100 aa5.54□□□□□ -1.52
UBE4B-204ENST00000462658 GP9P14770 177 aa5.54□□□□□ -1.52
UBE4B-204ENST00000462658 ADCYAP1P18509 176 aa5.54□□□□□ -1.52
UBE4B-204ENST00000462658 NPPCP23582 126 aa5.54□□□□□ -1.52
UBE4B-204ENST00000462658 ATP5G3P48201 142 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms