RNA–Protein interactions for RNA: ENST00000462613.1

SF3B1-206, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 3

Gene SF3B1, Length 141 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-206ENST00000462613 H3BMM0 161 aa4.71□□□□□ -1.66
SF3B1-206ENST00000462613 HMGB3O15347 200 aaKnown RBP4.71□□□□□ -1.66
SF3B1-206ENST00000462613 SPRY2O43597 315 aa4.71□□□□□ -1.66
SF3B1-206ENST00000462613 IGKV3-20P01619 116 aa4.71□□□□□ -1.66
SF3B1-206ENST00000462613 HBE1P02100 147 aa4.71□□□□□ -1.66
SF3B1-206ENST00000462613 GCHFRP30047 84 aa4.71□□□□□ -1.66
SF3B1-206ENST00000462613 PPT1P50897 306 aa4.71□□□□□ -1.66
SF3B1-206ENST00000462613 CNN1P51911 297 aaKnown RBP4.71□□□□□ -1.66
SF3B1-206ENST00000462613 DEFB135Q30KP9 77 aa4.71□□□□□ -1.66
SF3B1-206ENST00000462613 TMEM78Q5T7P6 136 aa4.71□□□□□ -1.66
SF3B1-206ENST00000462613 IGFL4Q6B9Z1 124 aa4.71□□□□□ -1.66
SF3B1-206ENST00000462613 LINC00322Q6ZN03 302 aaPredicted RBP4.71□□□□□ -1.66
SF3B1-206ENST00000462613 SBSPONQ8IVN8 264 aa4.71□□□□□ -1.66
SF3B1-206ENST00000462613 OR8A1Q8NGG7 326 aa4.71□□□□□ -1.66
SF3B1-206ENST00000462613 FAM213BQ8TBF2 198 aa4.71□□□□□ -1.66
SF3B1-206ENST00000462613 FXYD5Q96DB9 178 aa4.71□□□□□ -1.66
SF3B1-206ENST00000462613 SAT2Q96F10 170 aaPredicted RBP4.71□□□□□ -1.66
SF3B1-206ENST00000462613 PHYHIPLQ96FC7 376 aa4.71□□□□□ -1.66
SF3B1-206ENST00000462613 C17orf77Q96MU5 243 aa4.71□□□□□ -1.66
SF3B1-206ENST00000462613 CITED4Q96RK1 184 aa4.71□□□□□ -1.66
SF3B1-206ENST00000462613 TM2D3Q9BRN9 247 aa4.71□□□□□ -1.66
SF3B1-206ENST00000462613 TMEM208Q9BTX3 173 aa4.71□□□□□ -1.66
SF3B1-206ENST00000462613 MAP1LC3BQ9GZQ8 125 aa4.71□□□□□ -1.66
SF3B1-206ENST00000462613 Q9H3A6 140 aa4.71□□□□□ -1.66
SF3B1-206ENST00000462613 OTORQ9NRC9 128 aa4.71□□□□□ -1.66
SF3B1-206ENST00000462613 TP53TG1Q9Y2A0 90 aa4.71□□□□□ -1.66
SF3B1-206ENST00000462613 RFNGQ9Y644 331 aa4.71□□□□□ -1.66
SF3B1-206ENST00000462613 U3KQK5 164 aa4.71□□□□□ -1.66
SF3B1-206ENST00000462613 TRAV8-2A0A0B4J237 113 aa4.7□□□□□ -1.66
SF3B1-206ENST00000462613 SERTM2A0A1B0GWG4 89 aa4.7□□□□□ -1.66
SF3B1-206ENST00000462613 PGPA6NDG6 321 aa4.7□□□□□ -1.66
SF3B1-206ENST00000462613 F6UB75 175 aa4.7□□□□□ -1.66
SF3B1-206ENST00000462613 F6UZH7 168 aa4.7□□□□□ -1.66
SF3B1-206ENST00000462613 BOLA2-SMG1P6H3BVE0 249 aa4.7□□□□□ -1.66
SF3B1-206ENST00000462613 SLC17A3O00476 420 aa4.7□□□□□ -1.66
SF3B1-206ENST00000462613 H2AFB1P0C5Y9 115 aa4.7□□□□□ -1.66
SF3B1-206ENST00000462613 EXOC3-AS1Q8N2X6 119 aa4.7□□□□□ -1.66
SF3B1-206ENST00000462613 C9orf62Q8N4C0 152 aa4.7□□□□□ -1.66
SF3B1-206ENST00000462613 ARL6IP6Q8N6S5 226 aa4.7□□□□□ -1.66
SF3B1-206ENST00000462613 SFT2D1Q8WV19 159 aa4.7□□□□□ -1.66
SF3B1-206ENST00000462613 C20orf173Q96LM9 149 aa4.7□□□□□ -1.66
SF3B1-206ENST00000462613 GOLT1BQ9Y3E0 138 aa4.7□□□□□ -1.66
SF3B1-206ENST00000462613 A0A1W2PRE2 83 aa4.69□□□□□ -1.66
SF3B1-206ENST00000462613 FBLL1A6NHQ2 334 aaKnown RBP4.69□□□□□ -1.66
SF3B1-206ENST00000462613 ZNF705FA8MVS1 300 aaPredicted RBP4.69□□□□□ -1.66
SF3B1-206ENST00000462613 M0R3E3 92 aa4.69□□□□□ -1.66
SF3B1-206ENST00000462613 NDUFB4O95168 129 aa4.69□□□□□ -1.66
SF3B1-206ENST00000462613 INSP01308 110 aa4.69□□□□□ -1.66
SF3B1-206ENST00000462613 IFNA1P01562 189 aa4.69□□□□□ -1.66
SF3B1-206ENST00000462613 IFNA7P01567 189 aa4.69□□□□□ -1.66
SF3B1-206ENST00000462613 SLC25A5P05141 298 aaKnown RBP4.69□□□□□ -1.66
SF3B1-206ENST00000462613 HLA-DMBP28068 263 aa4.69□□□□□ -1.66
SF3B1-206ENST00000462613 LEPP41159 167 aa4.69□□□□□ -1.66
SF3B1-206ENST00000462613 CDKN1BP46527 198 aa4.69□□□□□ -1.66
SF3B1-206ENST00000462613 SULT1A2P50226 295 aa4.69□□□□□ -1.66
SF3B1-206ENST00000462613 CD300CQ08708 224 aa4.69□□□□□ -1.66
SF3B1-206ENST00000462613 GDF5OSQ5U4N7 250 aa4.69□□□□□ -1.66
SF3B1-206ENST00000462613 TMEM256Q8N2U0 113 aa4.69□□□□□ -1.66
SF3B1-206ENST00000462613 C5orf17Q8NAS9 161 aa4.69□□□□□ -1.66
SF3B1-206ENST00000462613 RNF183Q96D59 192 aa4.69□□□□□ -1.66
SF3B1-206ENST00000462613 ZNF503Q96F45 646 aa4.69□□□□□ -1.66
SF3B1-206ENST00000462613 LINC00477Q96M19 166 aa4.69□□□□□ -1.66
SF3B1-206ENST00000462613 ODF3Q96PU9 254 aa4.69□□□□□ -1.66
SF3B1-206ENST00000462613 RARRES2Q99969 163 aa4.69□□□□□ -1.66
SF3B1-206ENST00000462613 C20orf144Q9BQM9 153 aa4.69□□□□□ -1.66
SF3B1-206ENST00000462613 NDFIP1Q9BT67 221 aa4.69□□□□□ -1.66
SF3B1-206ENST00000462613 XCL2Q9UBD3 114 aa4.69□□□□□ -1.66
SF3B1-206ENST00000462613 RPH3ALQ9UNE2 315 aa4.69□□□□□ -1.66
SF3B1-206ENST00000462613 ARL2-SNX15V9GYD0 113 aa4.69□□□□□ -1.66
SF3B1-206ENST00000462613 MEGF8Q7Z7M0 2845 aa4.69□□□□□ -1.66
SF3B1-206ENST00000462613 IGHV3OR16-12A0A075B7B8 117 aa4.68□□□□□ -1.66
SF3B1-206ENST00000462613 RBAKDNA6NC62 111 aa4.68□□□□□ -1.66
SF3B1-206ENST00000462613 ZNF705EA8MWA4 302 aaPredicted RBP4.68□□□□□ -1.66
SF3B1-206ENST00000462613 EIF3GO75821 320 aaKnown RBP eCLIP4.68□□□□□ -1.66
SF3B1-206ENST00000462613 ZNF705DP0CH99 300 aaPredicted RBP4.68□□□□□ -1.66
SF3B1-206ENST00000462613 ZNF705BP0CI00 300 aaPredicted RBP4.68□□□□□ -1.66
SF3B1-206ENST00000462613 MIFP14174 115 aa4.68□□□□□ -1.66
SF3B1-206ENST00000462613 NKX2-5P52952 324 aaPredicted RBP4.68□□□□□ -1.66
SF3B1-206ENST00000462613 FGF8P55075 233 aaPredicted RBP4.68□□□□□ -1.66
SF3B1-206ENST00000462613 FXYD7P58549 80 aa4.68□□□□□ -1.66
SF3B1-206ENST00000462613 UBE2G2P60604 165 aa4.68□□□□□ -1.66
SF3B1-206ENST00000462613 SUMO1P63165 101 aaKnown RBP4.68□□□□□ -1.66
SF3B1-206ENST00000462613 BLOC1S1P78537 153 aa4.68□□□□□ -1.66
SF3B1-206ENST00000462613 SPINK13Q1W4C9 94 aa4.68□□□□□ -1.66
SF3B1-206ENST00000462613 CST9LP1Q5W188 147 aa4.68□□□□□ -1.66
SF3B1-206ENST00000462613 C9orf47Q6ZRZ4 202 aa4.68□□□□□ -1.66
SF3B1-206ENST00000462613 OR11H2Q8NH07 326 aa4.68□□□□□ -1.66
SF3B1-206ENST00000462613 IL17DQ8TAD2 202 aa4.68□□□□□ -1.66
SF3B1-206ENST00000462613 MBD3L1Q8WWY6 194 aa4.68□□□□□ -1.66
SF3B1-206ENST00000462613 IGF2BP2-AS1Q96M15 143 aa4.68□□□□□ -1.66
SF3B1-206ENST00000462613 TCEAL7Q9BRU2 100 aa4.68□□□□□ -1.66
SF3B1-206ENST00000462613 NIPSNAP3BQ9BS92 247 aa4.68□□□□□ -1.66
SF3B1-206ENST00000462613 SLC35B3Q9H1N7 401 aa4.68□□□□□ -1.66
SF3B1-206ENST00000462613 MANBALQ9NQG1 85 aa4.68□□□□□ -1.66
SF3B1-206ENST00000462613 IGKV2-40A0A087WW87 121 aaPredicted RBP4.67□□□□□ -1.66
SF3B1-206ENST00000462613 TRBV7-9A0A0J9YWB2 115 aa4.67□□□□□ -1.66
SF3B1-206ENST00000462613 A0A1B0GV50 99 aa4.67□□□□□ -1.66
SF3B1-206ENST00000462613 SMIM9A6NGZ8 99 aa4.67□□□□□ -1.66
SF3B1-206ENST00000462613 A8MTW9 85 aa4.67□□□□□ -1.66
SF3B1-206ENST00000462613 DIRC3C9JPN6 131 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms