RNA–Protein interactions for RNA: ENST00000461550.5

MRPL28-207, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 5

Gene MRPL28, Length 1,478 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-207ENST00000461550 Q6ZTC4 211 aa12.57□□□□□ -0.4
MRPL28-207ENST00000461550 PCNPQ8WW12 178 aaKnown RBP12.57□□□□□ -0.4
MRPL28-207ENST00000461550 TMEM37Q8WXS4 190 aa12.57□□□□□ -0.4
MRPL28-207ENST00000461550 GPR82Q96P67 336 aa12.57□□□□□ -0.4
MRPL28-207ENST00000461550 HRH4Q9H3N8 390 aa12.57□□□□□ -0.4
MRPL28-207ENST00000461550 CYTL1Q9NRR1 136 aa12.57□□□□□ -0.4
MRPL28-207ENST00000461550 TRAV8-2A0A0B4J237 113 aa12.56□□□□□ -0.4
MRPL28-207ENST00000461550 C17orf112F2Z3M2 114 aa12.56□□□□□ -0.4
MRPL28-207ENST00000461550 TEX46H3BTG2 121 aa12.56□□□□□ -0.4
MRPL28-207ENST00000461550 H2AFB1P0C5Y9 115 aa12.56□□□□□ -0.4
MRPL28-207ENST00000461550 ZNF705DP0CH99 300 aaPredicted RBP12.56□□□□□ -0.4
MRPL28-207ENST00000461550 ZNF705BP0CI00 300 aaPredicted RBP12.56□□□□□ -0.4
MRPL28-207ENST00000461550 PRB4P10163 310 aaPredicted RBP12.56□□□□□ -0.4
MRPL28-207ENST00000461550 S100A7P31151 101 aa12.56□□□□□ -0.4
MRPL28-207ENST00000461550 GCSAMLQ5JQS6 135 aa12.56□□□□□ -0.4
MRPL28-207ENST00000461550 SAMD13Q5VXD3 122 aa12.56□□□□□ -0.4
MRPL28-207ENST00000461550 C10orf113Q5VZT2 155 aa12.56□□□□□ -0.4
MRPL28-207ENST00000461550 RPL7L1Q6DKI1 246 aaKnown RBP12.56□□□□□ -0.4
MRPL28-207ENST00000461550 CLRN3Q8NCR9 226 aa12.56□□□□□ -0.4
MRPL28-207ENST00000461550 C2CD4CQ8TF44 421 aa12.56□□□□□ -0.4
MRPL28-207ENST00000461550 DNAJC4Q9NNZ3 241 aa12.56□□□□□ -0.4
MRPL28-207ENST00000461550 IGLL5B9A064 214 aa12.55□□□□□ -0.4
MRPL28-207ENST00000461550 CTAG1AP78358 180 aa12.55□□□□□ -0.4
MRPL28-207ENST00000461550 PSG9Q00887 426 aa12.55□□□□□ -0.4
MRPL28-207ENST00000461550 ALKAL2Q6UX46 152 aa12.55□□□□□ -0.4
MRPL28-207ENST00000461550 ZNF705AQ6ZN79 300 aaPredicted RBP12.55□□□□□ -0.4
MRPL28-207ENST00000461550 LINC00305Q7Z4B0 112 aa12.55□□□□□ -0.4
MRPL28-207ENST00000461550 ZNF705FA8MVS1 300 aaPredicted RBP12.54□□□□□ -0.4
MRPL28-207ENST00000461550 EMP1P54849 157 aa12.54□□□□□ -0.4
MRPL28-207ENST00000461550 ZNF266Q14584 549 aa12.54□□□□□ -0.4
MRPL28-207ENST00000461550 SPATA31B1PQ5VZV4 182 aa12.54□□□□□ -0.4
MRPL28-207ENST00000461550 HSD17B11Q8NBQ5 300 aa12.54□□□□□ -0.4
MRPL28-207ENST00000461550 OR1L4Q8NGR5 311 aa12.54□□□□□ -0.4
MRPL28-207ENST00000461550 CLUHP3Q96NS8 147 aa12.54□□□□□ -0.4
MRPL28-207ENST00000461550 ZNF471Q9BX82 626 aaPredicted RBP12.54□□□□□ -0.4
MRPL28-207ENST00000461550 PARD6GQ9BYG4 376 aaPredicted RBP12.54□□□□□ -0.4
MRPL28-207ENST00000461550 BORCS7-ASMTA0A0B4J1R7 106 aa12.53□□□□□ -0.4
MRPL28-207ENST00000461550 TRAV5A0A0B4J249 113 aa12.53□□□□□ -0.4
MRPL28-207ENST00000461550 RAB19A4D1S5 217 aa12.53□□□□□ -0.4
MRPL28-207ENST00000461550 SNRPCP09234 159 aaKnown RBP12.53□□□□□ -0.4
MRPL28-207ENST00000461550 RPL7P18124 248 aaKnown RBP12.53□□□□□ -0.4
MRPL28-207ENST00000461550 MORN5Q5VZ52 161 aa12.53□□□□□ -0.4
MRPL28-207ENST00000461550 RPP25LQ8N5L8 163 aaKnown RBP12.53□□□□□ -0.4
MRPL28-207ENST00000461550 CNN1P51911 297 aaKnown RBP12.53□□□□□ -0.4
MRPL28-207ENST00000461550 C12orf74Q32Q52 190 aa12.53□□□□□ -0.4
MRPL28-207ENST00000461550 FFAR4Q5NUL3 377 aa12.53□□□□□ -0.4
MRPL28-207ENST00000461550 AMTNQ6UX39 209 aa12.53□□□□□ -0.4
MRPL28-207ENST00000461550 S100A7AQ86SG5 101 aa12.53□□□□□ -0.4
MRPL28-207ENST00000461550 LINC00518Q8N0U6 118 aa12.53□□□□□ -0.4
MRPL28-207ENST00000461550 ZNF738Q8NE65 137 aa12.53□□□□□ -0.4
MRPL28-207ENST00000461550 PFDN5Q99471 154 aa12.53□□□□□ -0.4
MRPL28-207ENST00000461550 TRAV10A0A0B4J240 114 aa12.52□□□□□ -0.41
MRPL28-207ENST00000461550 C11orf94C9JXX5 98 aa12.52□□□□□ -0.41
MRPL28-207ENST00000461550 C1orf158Q8N1D5 194 aa12.52□□□□□ -0.41
MRPL28-207ENST00000461550 NEU1Q99519 415 aa12.52□□□□□ -0.41
MRPL28-207ENST00000461550 KCNIP2Q9NS61 270 aa12.52□□□□□ -0.41
MRPL28-207ENST00000461550 A8MTW9 85 aa12.51□□□□□ -0.41
MRPL28-207ENST00000461550 M0R2Z0 102 aa12.51□□□□□ -0.41
MRPL28-207ENST00000461550 MRPS12O15235 138 aaKnown RBP12.51□□□□□ -0.41
MRPL28-207ENST00000461550 ATP6V0CP27449 155 aa12.51□□□□□ -0.41
MRPL28-207ENST00000461550 LGALS9CQ6DKI2 356 aa12.51□□□□□ -0.41
MRPL28-207ENST00000461550 A0A087X0K7 114 aa12.5□□□□□ -0.41
MRPL28-207ENST00000461550 SPINK13Q1W4C9 94 aa12.5□□□□□ -0.41
MRPL28-207ENST00000461550 STOML3Q8TAV4 291 aa12.5□□□□□ -0.41
MRPL28-207ENST00000461550 SH3BGRL3Q9H299 93 aa12.5□□□□□ -0.41
MRPL28-207ENST00000461550 APLNQ9ULZ1 77 aa12.5□□□□□ -0.41
MRPL28-207ENST00000461550 GOLT1BQ9Y3E0 138 aa12.5□□□□□ -0.41
MRPL28-207ENST00000461550 TIMM9Q9Y5J7 89 aa12.5□□□□□ -0.41
MRPL28-207ENST00000461550 KMT2AQ03164 3969 aa12.49□□□□□ -0.41
MRPL28-207ENST00000461550 H3BTX0 84 aa12.49□□□□□ -0.41
MRPL28-207ENST00000461550 S100A12P80511 92 aa12.49□□□□□ -0.41
MRPL28-207ENST00000461550 MIR17HGQ75NE6 70 aa12.49□□□□□ -0.41
MRPL28-207ENST00000461550 NKX6-2Q9C056 277 aaPredicted RBP12.49□□□□□ -0.41
MRPL28-207ENST00000461550 IGHV4-4A0A075B6R2 117 aa12.48□□□□□ -0.41
MRPL28-207ENST00000461550 DEFB131BA0A096LNP1 70 aa12.48□□□□□ -0.41
MRPL28-207ENST00000461550 SMIM9A6NGZ8 99 aa12.48□□□□□ -0.41
MRPL28-207ENST00000461550 EIF3GO75821 320 aaKnown RBP eCLIP12.48□□□□□ -0.41
MRPL28-207ENST00000461550 DUSP14O95147 198 aaKnown RBP12.48□□□□□ -0.41
MRPL28-207ENST00000461550 APOC3P02656 99 aa12.48□□□□□ -0.41
MRPL28-207ENST00000461550 PRM2P04554 102 aa12.48□□□□□ -0.41
MRPL28-207ENST00000461550 TPT1P13693 172 aaKnown RBP12.48□□□□□ -0.41
MRPL28-207ENST00000461550 HIST1H1AQ02539 215 aaPredicted RBP12.48□□□□□ -0.41
MRPL28-207ENST00000461550 BAP18Q8IXM2 172 aa12.48□□□□□ -0.41
MRPL28-207ENST00000461550 HBE1P02100 147 aa12.47□□□□□ -0.41
MRPL28-207ENST00000461550 RAB2AP61019 212 aa12.47□□□□□ -0.41
MRPL28-207ENST00000461550 EIF5AP63241 154 aaKnown RBP12.47□□□□□ -0.41
MRPL28-207ENST00000461550 PSG3Q16557 428 aa12.47□□□□□ -0.41
MRPL28-207ENST00000461550 BPIFA4PQ86YQ2 179 aa12.47□□□□□ -0.41
MRPL28-207ENST00000461550 IGF2BP2-AS1Q96M15 143 aa12.47□□□□□ -0.41
MRPL28-207ENST00000461550 TMEM208Q9BTX3 173 aa12.47□□□□□ -0.41
MRPL28-207ENST00000461550 PLA2G2EQ9NZK7 142 aa12.47□□□□□ -0.41
MRPL28-207ENST00000461550 RNF24Q9Y225 148 aa12.47□□□□□ -0.41
MRPL28-207ENST00000461550 TRAV12-2A0A075B6T6 113 aa12.46□□□□□ -0.41
MRPL28-207ENST00000461550 LOC102723971A0A1B0GUV8 181 aa12.46□□□□□ -0.41
MRPL28-207ENST00000461550 TMEM189A5PLL7 270 aa12.46□□□□□ -0.41
MRPL28-207ENST00000461550 SLC17A3O00476 420 aa12.46□□□□□ -0.41
MRPL28-207ENST00000461550 CRXO43186 299 aaPredicted RBP12.46□□□□□ -0.41
MRPL28-207ENST00000461550 SPART-AS1P0CW21 52 aa12.46□□□□□ -0.41
MRPL28-207ENST00000461550 RHOBP62745 196 aa12.46□□□□□ -0.41
MRPL28-207ENST00000461550 ACOT6Q3I5F7 207 aaPredicted RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms