RNA–Protein interactions for RNA: ENST00000461433.1

SSBP1-202, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 1,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-202ENST00000461433 MBD3L1Q8WWY6 194 aa8.29□□□□□ -1.08
SSBP1-202ENST00000461433 TMPRSS5Q9H3S3 457 aa8.29□□□□□ -1.08
SSBP1-202ENST00000461433 CLEC5AQ9NY25 188 aa8.29□□□□□ -1.08
SSBP1-202ENST00000461433 HLA-DRB4X5D2U9 266 aa8.29□□□□□ -1.08
SSBP1-202ENST00000461433 MAP1LC3B2A6NCE7 125 aa8.28□□□□□ -1.08
SSBP1-202ENST00000461433 A8MTW9 85 aa8.28□□□□□ -1.08
SSBP1-202ENST00000461433 ZNF705DP0CH99 300 aaPredicted RBP8.28□□□□□ -1.08
SSBP1-202ENST00000461433 ZNF705BP0CI00 300 aaPredicted RBP8.28□□□□□ -1.08
SSBP1-202ENST00000461433 RANP62826 216 aaKnown RBP8.28□□□□□ -1.08
SSBP1-202ENST00000461433 ICAM4Q14773 271 aa8.28□□□□□ -1.08
SSBP1-202ENST00000461433 FAM74A1Q5RGS3 127 aa8.28□□□□□ -1.08
SSBP1-202ENST00000461433 STHQ8IWL8 128 aa8.28□□□□□ -1.08
SSBP1-202ENST00000461433 LYPD1Q8N2G4 141 aa8.28□□□□□ -1.08
SSBP1-202ENST00000461433 RPUSD4Q96CM3 377 aaKnown RBP8.28□□□□□ -1.08
SSBP1-202ENST00000461433 MAP1LC3BQ9GZQ8 125 aa8.28□□□□□ -1.08
SSBP1-202ENST00000461433 Q9H3A6 140 aa8.28□□□□□ -1.08
SSBP1-202ENST00000461433 GIG44P09565 113 aaPredicted RBP8.27□□□□□ -1.08
SSBP1-202ENST00000461433 RAB5CP51148 216 aa8.27□□□□□ -1.08
SSBP1-202ENST00000461433 ALKAL2Q6UX46 152 aa8.27□□□□□ -1.08
SSBP1-202ENST00000461433 OR8A1Q8NGG7 326 aa8.27□□□□□ -1.08
SSBP1-202ENST00000461433 MRPL53Q96EL3 112 aaKnown RBP8.27□□□□□ -1.08
SSBP1-202ENST00000461433 CLUHP3Q96NS8 147 aa8.27□□□□□ -1.08
SSBP1-202ENST00000461433 ASCL2Q99929 193 aa8.27□□□□□ -1.08
SSBP1-202ENST00000461433 PRELID1Q9Y255 219 aa8.27□□□□□ -1.08
SSBP1-202ENST00000461433 COL7A1Q02388 2944 aa8.27□□□□□ -1.09
SSBP1-202ENST00000461433 KIR2DL5BA0A0G2JN68 375 aa8.27□□□□□ -1.09
SSBP1-202ENST00000461433 KIR2DL5BA0A0G2JPC4 375 aa8.27□□□□□ -1.09
SSBP1-202ENST00000461433 EBLN2Q6P2I7 272 aa8.27□□□□□ -1.09
SSBP1-202ENST00000461433 AMTNQ6UX39 209 aa8.27□□□□□ -1.09
SSBP1-202ENST00000461433 KIR2DL5AQ8N109 375 aa8.27□□□□□ -1.09
SSBP1-202ENST00000461433 KIR2DL5BQ8NHK3 375 aa8.27□□□□□ -1.09
SSBP1-202ENST00000461433 SFT2D1Q8WV19 159 aa8.27□□□□□ -1.09
SSBP1-202ENST00000461433 AAMDCQ9H7C9 122 aa8.27□□□□□ -1.09
SSBP1-202ENST00000461433 TMEM167BQ9NRX6 74 aa8.27□□□□□ -1.09
SSBP1-202ENST00000461433 IGKV3-20P01619 116 aa8.26□□□□□ -1.09
SSBP1-202ENST00000461433 H2AFB1P0C5Y9 115 aa8.26□□□□□ -1.09
SSBP1-202ENST00000461433 CNN1P51911 297 aaKnown RBP8.26□□□□□ -1.09
SSBP1-202ENST00000461433 TM2D3Q9BRN9 247 aa8.26□□□□□ -1.09
SSBP1-202ENST00000461433 CSTL1Q9H114 145 aa8.26□□□□□ -1.09
SSBP1-202ENST00000461433 OTORQ9NRC9 128 aa8.26□□□□□ -1.09
SSBP1-202ENST00000461433 TRAV1-1A0A0B4J248 108 aa8.25□□□□□ -1.09
SSBP1-202ENST00000461433 PGPA6NDG6 321 aa8.25□□□□□ -1.09
SSBP1-202ENST00000461433 APOC4P55056 127 aa8.25□□□□□ -1.09
SSBP1-202ENST00000461433 HIST1H1AQ02539 215 aaPredicted RBP8.25□□□□□ -1.09
SSBP1-202ENST00000461433 IQCF2Q8IXL9 164 aa8.25□□□□□ -1.09
SSBP1-202ENST00000461433 OR4B1Q8NGF8 309 aa8.25□□□□□ -1.09
SSBP1-202ENST00000461433 YTHDF2Q9Y5A9 579 aaKnown RBP8.25□□□□□ -1.09
SSBP1-202ENST00000461433 A0A1W2PRE2 83 aa8.24□□□□□ -1.09
SSBP1-202ENST00000461433 GGTLC3B5MD39 225 aa8.24□□□□□ -1.09
SSBP1-202ENST00000461433 DUSP14O95147 198 aaKnown RBP8.24□□□□□ -1.09
SSBP1-202ENST00000461433 CCL20P78556 96 aa8.24□□□□□ -1.09
SSBP1-202ENST00000461433 MORN3Q6PF18 240 aaPredicted RBP8.24□□□□□ -1.09
SSBP1-202ENST00000461433 SLC35B3Q9H1N7 401 aa8.24□□□□□ -1.09
SSBP1-202ENST00000461433 DNAH9Q9NYC9 4486 aa8.24□□□□□ -1.09
SSBP1-202ENST00000461433 A0A1B0GV50 99 aa8.24□□□□□ -1.09
SSBP1-202ENST00000461433 FAM74A7A6NL05 159 aa8.24□□□□□ -1.09
SSBP1-202ENST00000461433 DIRC3C9JPN6 131 aa8.24□□□□□ -1.09
SSBP1-202ENST00000461433 NPIPB6E9PJ23 425 aa8.24□□□□□ -1.09
SSBP1-202ENST00000461433 UBE2CO00762 179 aa8.24□□□□□ -1.09
SSBP1-202ENST00000461433 UBE2G2P60604 165 aa8.24□□□□□ -1.09
SSBP1-202ENST00000461433 ERCC8Q13216 396 aa8.24□□□□□ -1.09
SSBP1-202ENST00000461433 CSNK1G2-AS1Q8NCQ2 148 aa8.24□□□□□ -1.09
SSBP1-202ENST00000461433 NBEAL2Q6ZNJ1 2754 aa8.23□□□□□ -1.09
SSBP1-202ENST00000461433 IGKV2-40A0A087WW87 121 aaPredicted RBP8.23□□□□□ -1.09
SSBP1-202ENST00000461433 ZNF705EA8MWA4 302 aaPredicted RBP8.23□□□□□ -1.09
SSBP1-202ENST00000461433 CA1P00915 261 aaPredicted RBP8.23□□□□□ -1.09
SSBP1-202ENST00000461433 IGKV2D-40P01614 121 aaPredicted RBP8.23□□□□□ -1.09
SSBP1-202ENST00000461433 CT45A10P0DMU9 189 aa8.23□□□□□ -1.09
SSBP1-202ENST00000461433 FXYD7P58549 80 aa8.23□□□□□ -1.09
SSBP1-202ENST00000461433 SUMO1P63165 101 aaKnown RBP8.23□□□□□ -1.09
SSBP1-202ENST00000461433 TEX261Q6UWH6 196 aa8.23□□□□□ -1.09
SSBP1-202ENST00000461433 C9orf47Q6ZRZ4 202 aa8.23□□□□□ -1.09
SSBP1-202ENST00000461433 Q6ZWC4 215 aa8.23□□□□□ -1.09
SSBP1-202ENST00000461433 ARL6IP6Q8N6S5 226 aa8.23□□□□□ -1.09
SSBP1-202ENST00000461433 OR10J6PQ8NGY7 276 aa8.23□□□□□ -1.09
SSBP1-202ENST00000461433 RXFP4Q8TDU9 374 aa8.23□□□□□ -1.09
SSBP1-202ENST00000461433 VGLL1Q99990 258 aa8.23□□□□□ -1.09
SSBP1-202ENST00000461433 AGPAT4-IT1Q9H0P7 198 aa8.23□□□□□ -1.09
SSBP1-202ENST00000461433 RETNQ9HD89 108 aa8.23□□□□□ -1.09
SSBP1-202ENST00000461433 NHLRC4P0CG21 123 aaPredicted RBP8.22□□□□□ -1.09
SSBP1-202ENST00000461433 GNG5P63218 68 aa8.22□□□□□ -1.09
SSBP1-202ENST00000461433 DEFB135Q30KP9 77 aa8.22□□□□□ -1.09
SSBP1-202ENST00000461433 CCDC28AQ8IWP9 274 aa8.22□□□□□ -1.09
SSBP1-202ENST00000461433 OVOL2Q9BRP0 275 aa8.22□□□□□ -1.09
SSBP1-202ENST00000461433 RBAKDNA6NC62 111 aa8.21□□□□□ -1.09
SSBP1-202ENST00000461433 CRXO43186 299 aaPredicted RBP8.21□□□□□ -1.09
SSBP1-202ENST00000461433 PAGE4O60829 102 aa8.21□□□□□ -1.09
SSBP1-202ENST00000461433 SLC25A5P05141 298 aaKnown RBP8.21□□□□□ -1.09
SSBP1-202ENST00000461433 CSN1S1P47710 185 aa8.21□□□□□ -1.09
SSBP1-202ENST00000461433 NUTF2P61970 127 aaKnown RBP8.21□□□□□ -1.09
SSBP1-202ENST00000461433 C5orf17Q8NAS9 161 aa8.21□□□□□ -1.09
SSBP1-202ENST00000461433 ZNF680Q8NEM1 530 aa8.21□□□□□ -1.09
SSBP1-202ENST00000461433 LYPD6BQ8NI32 183 aa8.21□□□□□ -1.09
SSBP1-202ENST00000461433 CMTM2Q8TAZ6 248 aa8.21□□□□□ -1.09
SSBP1-202ENST00000461433 RNF183Q96D59 192 aa8.21□□□□□ -1.09
SSBP1-202ENST00000461433 FAM19A4Q96LR4 140 aa8.21□□□□□ -1.09
SSBP1-202ENST00000461433 LINC00477Q96M19 166 aa8.21□□□□□ -1.09
SSBP1-202ENST00000461433 XCL2Q9UBD3 114 aa8.21□□□□□ -1.09
SSBP1-202ENST00000461433 EPDR1Q9UM22 224 aa8.21□□□□□ -1.09
SSBP1-202ENST00000461433 ARL2-SNX15V9GYD0 113 aa8.21□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms