RNA–Protein interactions for RNA: ENST00000460940.5

APTX-209, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,874 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-209ENST00000460940 ZNF320A2RRD8 509 aa8.53□□□□□ -1.04
APTX-209ENST00000460940 HYPMO75409 117 aa8.53□□□□□ -1.04
APTX-209ENST00000460940 TMEM50AO95807 157 aa8.53□□□□□ -1.04
APTX-209ENST00000460940 ADMP35318 185 aa8.53□□□□□ -1.04
APTX-209ENST00000460940 PAX9P55771 341 aa8.53□□□□□ -1.04
APTX-209ENST00000460940 LINC00310P59036 64 aa8.53□□□□□ -1.04
APTX-209ENST00000460940 Q6ZN92 141 aa8.53□□□□□ -1.04
APTX-209ENST00000460940 ZNF709Q8N972 641 aa8.53□□□□□ -1.04
APTX-209ENST00000460940 EEF1AKMT3Q96AZ1 226 aa8.53□□□□□ -1.04
APTX-209ENST00000460940 ZNF586Q9NXT0 402 aa8.53□□□□□ -1.04
APTX-209ENST00000460940 TIMM9Q9Y5J7 89 aa8.53□□□□□ -1.04
APTX-209ENST00000460940 TRBV7-1A0A0A6YYK4 115 aa8.53□□□□□ -1.04
APTX-209ENST00000460940 FAM78BQ5VT40 261 aa8.53□□□□□ -1.04
APTX-209ENST00000460940 TMEM217Q8N7C4 229 aa8.53□□□□□ -1.04
APTX-209ENST00000460940 CST9LQ9H4G1 147 aa8.53□□□□□ -1.04
APTX-209ENST00000460940 DIRC3C9JPN6 131 aa8.52□□□□□ -1.05
APTX-209ENST00000460940 HOXD3P31249 432 aaPredicted RBP8.52□□□□□ -1.05
APTX-209ENST00000460940 SUB1P53999 127 aaKnown RBP eCLIP8.52□□□□□ -1.058e-6■■■□□ 15.3
APTX-209ENST00000460940 SPINK9Q5DT21 86 aa8.52□□□□□ -1.05
APTX-209ENST00000460940 SAMD5Q5TGI4 173 aa8.52□□□□□ -1.05
APTX-209ENST00000460940 RAB40CQ96S21 281 aa8.52□□□□□ -1.05
APTX-209ENST00000460940 ATP6V0BQ99437 205 aa8.52□□□□□ -1.05
APTX-209ENST00000460940 FAM90A26D6RGX4 464 aa8.51□□□□□ -1.05
APTX-209ENST00000460940 SERF1AO75920 110 aa8.51□□□□□ -1.05
APTX-209ENST00000460940 MFAP2P55001 183 aa8.51□□□□□ -1.05
APTX-209ENST00000460940 ZNF479Q96JC4 524 aa8.51□□□□□ -1.05
APTX-209ENST00000460940 RSG1Q9BU20 258 aa8.51□□□□□ -1.05
APTX-209ENST00000460940 VSIRQ9H7M9 311 aa8.51□□□□□ -1.05
APTX-209ENST00000460940 K7ERU9 68 aa8.51□□□□□ -1.05
APTX-209ENST00000460940 CORTO00230 105 aa8.51□□□□□ -1.05
APTX-209ENST00000460940 CRISP2P16562 243 aa8.51□□□□□ -1.05
APTX-209ENST00000460940 TSPOP30536 169 aa8.51□□□□□ -1.05
APTX-209ENST00000460940 SLURP1P55000 103 aa8.51□□□□□ -1.05
APTX-209ENST00000460940 KPRPQ5T749 579 aaPredicted RBP8.51□□□□□ -1.05
APTX-209ENST00000460940 PVRIGQ6DKI7 326 aa8.51□□□□□ -1.05
APTX-209ENST00000460940 TCF24Q7RTU0 167 aa8.51□□□□□ -1.05
APTX-209ENST00000460940 ZNF502Q8TBZ5 544 aa8.51□□□□□ -1.05
APTX-209ENST00000460940 CCDC140Q96MF4 163 aa8.51□□□□□ -1.05
APTX-209ENST00000460940 HEYLQ9NQ87 328 aaPredicted RBP8.51□□□□□ -1.05
APTX-209ENST00000460940 SLC39A9Q9NUM3 307 aa8.51□□□□□ -1.05
APTX-209ENST00000460940 CTXND1A0A1B0GTU2 59 aa8.5□□□□□ -1.05
APTX-209ENST00000460940 BMPR1BO00238 502 aa8.5□□□□□ -1.05
APTX-209ENST00000460940 OVOL1O14753 267 aa8.5□□□□□ -1.05
APTX-209ENST00000460940 TRBV12-3P01733 135 aa8.5□□□□□ -1.05
APTX-209ENST00000460940 RNASE2P10153 161 aaKnown RBP8.5□□□□□ -1.05
APTX-209ENST00000460940 IGLL1P15814 213 aa8.5□□□□□ -1.05
APTX-209ENST00000460940 RPEL1Q2QD12 228 aa8.5□□□□□ -1.05
APTX-209ENST00000460940 SAMD10Q9BYL1 202 aa8.5□□□□□ -1.05
APTX-209ENST00000460940 MEGF8Q7Z7M0 2845 aa8.5□□□□□ -1.05
APTX-209ENST00000460940 K7EIM0 57 aa8.49□□□□□ -1.05
APTX-209ENST00000460940 WIPF1O43516 503 aa8.49□□□□□ -1.05
APTX-209ENST00000460940 ZNF253O75346 499 aa8.49□□□□□ -1.05
APTX-209ENST00000460940 ATP5IP56385 69 aaPredicted RBP8.49□□□□□ -1.05
APTX-209ENST00000460940 KLF5Q13887 457 aaPredicted RBP8.49□□□□□ -1.05
APTX-209ENST00000460940 C9orf66Q5T8R8 295 aa8.49□□□□□ -1.05
APTX-209ENST00000460940 DLX4Q92988 240 aaPredicted RBP8.49□□□□□ -1.05
APTX-209ENST00000460940 C21orf62Q9NYP8 219 aa8.49□□□□□ -1.05
APTX-209ENST00000460940 G3V4G9 280 aa8.49□□□□□ -1.05
APTX-209ENST00000460940 I3L2K1 104 aa8.49□□□□□ -1.05
APTX-209ENST00000460940 GPX1P07203 203 aa8.49□□□□□ -1.05
APTX-209ENST00000460940 FCGR2BP31994 310 aaPredicted RBP8.49□□□□□ -1.05
APTX-209ENST00000460940 ARL3P36405 182 aa8.49□□□□□ -1.05
APTX-209ENST00000460940 INSL3P51460 131 aa8.49□□□□□ -1.05
APTX-209ENST00000460940 HBG1P69891 147 aa8.49□□□□□ -1.05
APTX-209ENST00000460940 HBG2P69892 147 aa8.49□□□□□ -1.05
APTX-209ENST00000460940 SLAQ13239 276 aa8.49□□□□□ -1.05
APTX-209ENST00000460940 C2orf83Q53S99 150 aa8.49□□□□□ -1.05
APTX-209ENST00000460940 CLEC19AQ6UXS0 136 aa8.49□□□□□ -1.05
APTX-209ENST00000460940 WDR61Q9GZS3 305 aaKnown RBP8.49□□□□□ -1.05
APTX-209ENST00000460940 SMPXQ9UHP9 88 aa8.49□□□□□ -1.05
APTX-209ENST00000460940 GRIFINA4D1Z8 144 aa8.48□□□□□ -1.05
APTX-209ENST00000460940 NXPH3O95157 252 aa8.48□□□□□ -1.05
APTX-209ENST00000460940 MT-CO2P00403 227 aa8.48□□□□□ -1.05
APTX-209ENST00000460940 IGHV3-23P01764 117 aa8.48□□□□□ -1.05
APTX-209ENST00000460940 GPR183P32249 361 aa8.48□□□□□ -1.05
APTX-209ENST00000460940 BEAN1Q3B7T3 259 aa8.48□□□□□ -1.05
APTX-209ENST00000460940 OXLD1Q5BKU9 147 aa8.48□□□□□ -1.05
APTX-209ENST00000460940 FFAR4Q5NUL3 377 aa8.48□□□□□ -1.05
APTX-209ENST00000460940 PET117Q6UWS5 81 aa8.48□□□□□ -1.05
APTX-209ENST00000460940 SPXQ9BT56 116 aa8.48□□□□□ -1.05
APTX-209ENST00000460940 S4R3C0 116 aa8.48□□□□□ -1.05
APTX-209ENST00000460940 H0Y8G0 127 aa8.47□□□□□ -1.05
APTX-209ENST00000460940 PDE6DO43924 150 aa8.47□□□□□ -1.05
APTX-209ENST00000460940 CLEC3BP05452 202 aa8.47□□□□□ -1.05
APTX-209ENST00000460940 NPY1RP25929 384 aa8.47□□□□□ -1.05
APTX-209ENST00000460940 HINT1P49773 126 aaPredicted RBP8.47□□□□□ -1.05
APTX-209ENST00000460940 KRTDAPP60985 99 aa8.47□□□□□ -1.05
APTX-209ENST00000460940 PMCHL1Q16048 86 aa8.47□□□□□ -1.05
APTX-209ENST00000460940 OR10J3Q5JRS4 329 aa8.47□□□□□ -1.05
APTX-209ENST00000460940 ACSM6Q6P461 480 aa8.47□□□□□ -1.05
APTX-209ENST00000460940 BAGE3Q86Y29 109 aa8.47□□□□□ -1.05
APTX-209ENST00000460940 BAGE2Q86Y30 109 aa8.47□□□□□ -1.05
APTX-209ENST00000460940 GPHB5Q86YW7 130 aa8.47□□□□□ -1.05
APTX-209ENST00000460940 OR9G4Q8NGQ1 327 aa8.47□□□□□ -1.05
APTX-209ENST00000460940 MRPL18Q9H0U6 180 aaKnown RBP8.47□□□□□ -1.05
APTX-209ENST00000460940 PEMTQ9UBM1 199 aa8.47□□□□□ -1.05
APTX-209ENST00000460940 MFAP4P55083 255 aa8.47□□□□□ -1.05
APTX-209ENST00000460940 SYNJ2BPP57105 145 aa8.47□□□□□ -1.05
APTX-209ENST00000460940 VAMP3Q15836 100 aa8.47□□□□□ -1.05
APTX-209ENST00000460940 Q56UQ5 140 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms