RNA–Protein interactions for RNA: ENST00000460731.5

PTPN12-209, Transcript of protein tyrosine phosphatase, non-receptor type 12, human

TSL 2

Gene PTPN12, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN12-209	ENST00000460731	LINC00322	Q6ZN03	302 aa	Predicted RBP	4.18	□□□□□ -1.74
PTPN12-209	ENST00000460731	PQLC2	Q6ZP29	291 aa		4.18	□□□□□ -1.74
PTPN12-209	ENST00000460731	MIR17HG	Q75NE6	70 aa		4.18	□□□□□ -1.74
PTPN12-209	ENST00000460731	TCF24	Q7RTU0	167 aa		4.18	□□□□□ -1.74
PTPN12-209	ENST00000460731	BPIFA4P	Q86YQ2	179 aa		4.18	□□□□□ -1.74
PTPN12-209	ENST00000460731	OR8I2	Q8N0Y5	310 aa		4.18	□□□□□ -1.74
PTPN12-209	ENST00000460731	ARL6IP6	Q8N6S5	226 aa		4.18	□□□□□ -1.74
PTPN12-209	ENST00000460731	OR10G4	Q8NGN3	311 aa		4.18	□□□□□ -1.74
PTPN12-209	ENST00000460731	OR10G9	Q8NGN4	311 aa		4.18	□□□□□ -1.74
PTPN12-209	ENST00000460731	OR10G7	Q8NGN6	311 aa		4.18	□□□□□ -1.74
PTPN12-209	ENST00000460731	LYPD6B	Q8NI32	183 aa		4.18	□□□□□ -1.74
PTPN12-209	ENST00000460731	RAB24	Q969Q5	203 aa		4.18	□□□□□ -1.74
PTPN12-209	ENST00000460731	FXYD5	Q96DB9	178 aa		4.18	□□□□□ -1.74
PTPN12-209	ENST00000460731	PBDC1	Q9BVG4	233 aa		4.18	□□□□□ -1.74
PTPN12-209	ENST00000460731	ZNF471	Q9BX82	626 aa	Predicted RBP	4.18	□□□□□ -1.74
PTPN12-209	ENST00000460731	MS4A6A	Q9H2W1	248 aa		4.18	□□□□□ -1.74
PTPN12-209	ENST00000460731	NRN1	Q9NPD7	142 aa		4.18	□□□□□ -1.74
PTPN12-209	ENST00000460731	CLEC5A	Q9NY25	188 aa		4.18	□□□□□ -1.74
PTPN12-209	ENST00000460731	TMA7	Q9Y2S6	64 aa	Known RBP	4.18	□□□□□ -1.74
PTPN12-209	ENST00000460731	AGRN	O00468	2067 aa		4.18	□□□□□ -1.74
PTPN12-209	ENST00000460731	TRBV19	A0A075B6N1	114 aa		4.17	□□□□□ -1.74
PTPN12-209	ENST00000460731	TRAV8-2	A0A0B4J237	113 aa		4.17	□□□□□ -1.74
PTPN12-209	ENST00000460731	TRAV5	A0A0B4J249	113 aa		4.17	□□□□□ -1.74
PTPN12-209	ENST00000460731	IGHV3-66	A0A0C4DH42	116 aa		4.17	□□□□□ -1.74
PTPN12-209	ENST00000460731		A8MTW9	85 aa		4.17	□□□□□ -1.74
PTPN12-209	ENST00000460731	BOLA2-SMG1P6	H3BVE0	249 aa		4.17	□□□□□ -1.74
PTPN12-209	ENST00000460731	NBEAP1	P0C6P0	100 aa		4.17	□□□□□ -1.74
PTPN12-209	ENST00000460731	GALR1	P47211	349 aa		4.17	□□□□□ -1.74
PTPN12-209	ENST00000460731	PAFAH1B2	P68402	229 aa		4.17	□□□□□ -1.74
PTPN12-209	ENST00000460731	ODF3L2	Q3SX64	289 aa		4.17	□□□□□ -1.74
PTPN12-209	ENST00000460731	LEMD1	Q68G75	181 aa		4.17	□□□□□ -1.74
PTPN12-209	ENST00000460731	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		4.17	□□□□□ -1.74
PTPN12-209	ENST00000460731	RBPMS2	Q6ZRY4	209 aa	Known RBP	4.17	□□□□□ -1.74
PTPN12-209	ENST00000460731	LYPD1	Q8N2G4	141 aa		4.17	□□□□□ -1.74
PTPN12-209	ENST00000460731	DYNLRB2	Q8TF09	96 aa		4.17	□□□□□ -1.74
PTPN12-209	ENST00000460731	TMED6	Q8WW62	240 aa		4.17	□□□□□ -1.74
PTPN12-209	ENST00000460731	OR51M1	Q9H341	326 aa		4.17	□□□□□ -1.74
PTPN12-209	ENST00000460731	ZNF331	Q9NQX6	463 aa	Predicted RBP	4.17	□□□□□ -1.74
PTPN12-209	ENST00000460731	ZNF586	Q9NXT0	402 aa		4.17	□□□□□ -1.74
PTPN12-209	ENST00000460731	DOK5	Q9P104	306 aa		4.17	□□□□□ -1.74
PTPN12-209	ENST00000460731	STAB2	Q8WWQ8	2551 aa		4.17	□□□□□ -1.74
PTPN12-209	ENST00000460731	CTXND1	A0A1B0GTU2	59 aa		4.16	□□□□□ -1.74
PTPN12-209	ENST00000460731		A0A1W2PPV4	95 aa		4.16	□□□□□ -1.74
PTPN12-209	ENST00000460731	OR4C46	A6NHA9	309 aa		4.16	□□□□□ -1.74
PTPN12-209	ENST00000460731	CDC34	P49427	236 aa	Predicted RBP	4.16	□□□□□ -1.74
PTPN12-209	ENST00000460731	PSMB3	P49720	205 aa		4.16	□□□□□ -1.74
PTPN12-209	ENST00000460731	FHIT	P49789	147 aa		4.16	□□□□□ -1.74
PTPN12-209	ENST00000460731	TAS2R45	P59539	299 aa		4.16	□□□□□ -1.74
PTPN12-209	ENST00000460731	KHDC3L	Q587J8	217 aa		4.16	□□□□□ -1.74
PTPN12-209	ENST00000460731	AKR1C8P	Q5T2L2	129 aa		4.16	□□□□□ -1.74
PTPN12-209	ENST00000460731	TEX261	Q6UWH6	196 aa		4.16	□□□□□ -1.74
PTPN12-209	ENST00000460731	LCN15	Q6UWW0	184 aa		4.16	□□□□□ -1.74
PTPN12-209	ENST00000460731	SSX7	Q7RTT5	188 aa		4.16	□□□□□ -1.74
PTPN12-209	ENST00000460731	MRPL53	Q96EL3	112 aa	Known RBP	4.16	□□□□□ -1.74
PTPN12-209	ENST00000460731	ACTR3C	Q9C0K3	210 aa	Predicted RBP	4.16	□□□□□ -1.74
PTPN12-209	ENST00000460731	PPP1R14D	Q9NXH3	145 aa		4.16	□□□□□ -1.74
PTPN12-209	ENST00000460731	ARL2-SNX15	V9GYD0	113 aa		4.16	□□□□□ -1.74
PTPN12-209	ENST00000460731	PRKDC	P78527	4128 aa	Known RBP	4.16	□□□□□ -1.74
PTPN12-209	ENST00000460731	TENM3	Q9P273	2699 aa		4.16	□□□□□ -1.74
PTPN12-209	ENST00000460731	COL7A1	Q02388	2944 aa		4.15	□□□□□ -1.74
PTPN12-209	ENST00000460731		A0A1W2PRE2	83 aa		4.15	□□□□□ -1.75
PTPN12-209	ENST00000460731	CXorf1	O96002	111 aa		4.15	□□□□□ -1.75
PTPN12-209	ENST00000460731	CD7	P09564	240 aa		4.15	□□□□□ -1.75
PTPN12-209	ENST00000460731	PYY	P10082	97 aa		4.15	□□□□□ -1.75
PTPN12-209	ENST00000460731	GCHFR	P30047	84 aa		4.15	□□□□□ -1.75
PTPN12-209	ENST00000460731	PSG3	Q16557	428 aa		4.15	□□□□□ -1.75
PTPN12-209	ENST00000460731	CCDC28A	Q8IWP9	274 aa		4.15	□□□□□ -1.75
PTPN12-209	ENST00000460731	FAM24B	Q8N5W8	94 aa		4.15	□□□□□ -1.75
PTPN12-209	ENST00000460731	ZNF680	Q8NEM1	530 aa		4.15	□□□□□ -1.75
PTPN12-209	ENST00000460731	SLC50A1	Q9BRV3	221 aa		4.15	□□□□□ -1.75
PTPN12-209	ENST00000460731	PAXX	Q9BUH6	204 aa		4.15	□□□□□ -1.75
PTPN12-209	ENST00000460731	SLC25A22	Q9H936	323 aa		4.15	□□□□□ -1.75
PTPN12-209	ENST00000460731		K7EIL1	84 aa		4.14	□□□□□ -1.75
PTPN12-209	ENST00000460731	DNASE2	O00115	360 aa	Predicted RBP	4.14	□□□□□ -1.75
PTPN12-209	ENST00000460731	SLC17A3	O00476	420 aa		4.14	□□□□□ -1.75
PTPN12-209	ENST00000460731	NDUFS6	O75380	124 aa	Known RBP	4.14	□□□□□ -1.75
PTPN12-209	ENST00000460731	ARL14EPL	P0DKL9	152 aa		4.14	□□□□□ -1.75
PTPN12-209	ENST00000460731	ID1	P41134	155 aa		4.14	□□□□□ -1.75
PTPN12-209	ENST00000460731	SNRPD3	P62318	126 aa	Known RBP	4.14	□□□□□ -1.75
PTPN12-209	ENST00000460731	PSG9	Q00887	426 aa		4.14	□□□□□ -1.75
PTPN12-209	ENST00000460731	IFITM2	Q01629	132 aa		4.14	□□□□□ -1.75
PTPN12-209	ENST00000460731	GUCA2B	Q16661	112 aa		4.14	□□□□□ -1.75
PTPN12-209	ENST00000460731	FAM122C	Q6P4D5	195 aa		4.14	□□□□□ -1.75
PTPN12-209	ENST00000460731	FOXI2	Q6ZQN5	318 aa		4.14	□□□□□ -1.75
PTPN12-209	ENST00000460731	GBGT1	Q8N5D6	347 aa		4.14	□□□□□ -1.75
PTPN12-209	ENST00000460731	LRRC20	Q8TCA0	184 aa		4.14	□□□□□ -1.75
PTPN12-209	ENST00000460731	NKX6-2	Q9C056	277 aa	Predicted RBP	4.14	□□□□□ -1.75
PTPN12-209	ENST00000460731	MAP6D1	Q9H9H5	199 aa		4.14	□□□□□ -1.75
PTPN12-209	ENST00000460731	OTOR	Q9NRC9	128 aa		4.14	□□□□□ -1.75
PTPN12-209	ENST00000460731	TMEM167B	Q9NRX6	74 aa		4.14	□□□□□ -1.75
PTPN12-209	ENST00000460731	PRELID1	Q9Y255	219 aa		4.14	□□□□□ -1.75
PTPN12-209	ENST00000460731	TG	P01266	2768 aa		4.14	□□□□□ -1.75
PTPN12-209	ENST00000460731	KIR2DL5B	A0A0G2JN68	375 aa		4.13	□□□□□ -1.75
PTPN12-209	ENST00000460731	KIR2DL5B	A0A0G2JPC4	375 aa		4.13	□□□□□ -1.75
PTPN12-209	ENST00000460731	TRBV7-9	A0A0J9YWB2	115 aa		4.13	□□□□□ -1.75
PTPN12-209	ENST00000460731		A0A0J9YX75	114 aa		4.13	□□□□□ -1.75
PTPN12-209	ENST00000460731	RBAKDN	A6NC62	111 aa		4.13	□□□□□ -1.75
PTPN12-209	ENST00000460731	MAP1LC3B2	A6NCE7	125 aa		4.13	□□□□□ -1.75
PTPN12-209	ENST00000460731	RBMY1B	A6NDE4	496 aa	Known RBP	4.13	□□□□□ -1.75
PTPN12-209	ENST00000460731	RBMY1E	A6NEQ0	496 aa	Known RBP	4.13	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 173.5 ms