RNA–Protein interactions for RNA: ENST00000460431.1

SMARCD3-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-204ENST00000460431 KLK5Q9Y337 293 aaPredicted RBP11.83□□□□□ -0.52
SMARCD3-204ENST00000460431 TIMM9Q9Y5J7 89 aa11.83□□□□□ -0.52
SMARCD3-204ENST00000460431 RFNGQ9Y644 331 aa11.83□□□□□ -0.52
SMARCD3-204ENST00000460431 TMEM189A5PLL7 270 aa11.82□□□□□ -0.52
SMARCD3-204ENST00000460431 NBEAP1P0C6P0 100 aa11.82□□□□□ -0.52
SMARCD3-204ENST00000460431 OR10J6PQ8NGY7 276 aa11.82□□□□□ -0.52
SMARCD3-204ENST00000460431 BLNKQ8WV28 456 aa11.82□□□□□ -0.52
SMARCD3-204ENST00000460431 PAXXQ9BUH6 204 aa11.82□□□□□ -0.52
SMARCD3-204ENST00000460431 PPP1R14DQ9NXH3 145 aa11.82□□□□□ -0.52
SMARCD3-204ENST00000460431 PRELID1Q9Y255 219 aa11.82□□□□□ -0.52
SMARCD3-204ENST00000460431 INSP01308 110 aa11.81□□□□□ -0.52
SMARCD3-204ENST00000460431 HBE1P02100 147 aa11.81□□□□□ -0.52
SMARCD3-204ENST00000460431 ZNF266Q14584 549 aa11.81□□□□□ -0.52
SMARCD3-204ENST00000460431 BAP18Q8IXM2 172 aa11.81□□□□□ -0.52
SMARCD3-204ENST00000460431 OR2T35Q8NGX2 323 aa11.81□□□□□ -0.52
SMARCD3-204ENST00000460431 RNF141Q8WVD5 230 aa11.81□□□□□ -0.52
SMARCD3-204ENST00000460431 FXYD5Q96DB9 178 aa11.81□□□□□ -0.52
SMARCD3-204ENST00000460431 CELA1Q9UNI1 258 aa11.81□□□□□ -0.52
SMARCD3-204ENST00000460431 PLECQ15149 4684 aaKnown RBP11.8□□□□□ -0.52
SMARCD3-204ENST00000460431 TRAV12-2A0A075B6T6 113 aa11.8□□□□□ -0.52
SMARCD3-204ENST00000460431 C11orf94C9JXX5 98 aa11.8□□□□□ -0.52
SMARCD3-204ENST00000460431 M0R3E3 92 aa11.8□□□□□ -0.52
SMARCD3-204ENST00000460431 CDKN1BP46527 198 aa11.8□□□□□ -0.52
SMARCD3-204ENST00000460431 RRN3P1Q2M238 152 aa11.8□□□□□ -0.52
SMARCD3-204ENST00000460431 EXOC3-AS1Q8N2X6 119 aa11.8□□□□□ -0.52
SMARCD3-204ENST00000460431 INO80EQ8NBZ0 244 aaPredicted RBP11.8□□□□□ -0.52
SMARCD3-204ENST00000460431 ZNF503Q96F45 646 aa11.8□□□□□ -0.52
SMARCD3-204ENST00000460431 TMEM208Q9BTX3 173 aa11.8□□□□□ -0.52
SMARCD3-204ENST00000460431 TNFSF18Q9UNG2 199 aa11.8□□□□□ -0.52
SMARCD3-204ENST00000460431 HYDINQ4G0P3 5121 aa11.79□□□□□ -0.52
SMARCD3-204ENST00000460431 RNF222A6NCQ9 220 aa11.79□□□□□ -0.52
SMARCD3-204ENST00000460431 NPIPB6E9PJ23 425 aa11.79□□□□□ -0.52
SMARCD3-204ENST00000460431 G3V3Q6 166 aa11.79□□□□□ -0.52
SMARCD3-204ENST00000460431 OR7C2O60412 319 aa11.79□□□□□ -0.52
SMARCD3-204ENST00000460431 OR10J4P0C629 311 aa11.79□□□□□ -0.52
SMARCD3-204ENST00000460431 M6PRP20645 277 aa11.79□□□□□ -0.52
SMARCD3-204ENST00000460431 C12orf74Q32Q52 190 aa11.79□□□□□ -0.52
SMARCD3-204ENST00000460431 ACOT6Q3I5F7 207 aaPredicted RBP11.79□□□□□ -0.52
SMARCD3-204ENST00000460431 RPP25LQ8N5L8 163 aaKnown RBP11.79□□□□□ -0.52
SMARCD3-204ENST00000460431 AAMDCQ9H7C9 122 aa11.79□□□□□ -0.52
SMARCD3-204ENST00000460431 FXYD6-FXYD2A0A087WZ82 144 aa11.78□□□□□ -0.52
SMARCD3-204ENST00000460431 LOC102723971A0A1B0GUV8 181 aa11.78□□□□□ -0.52
SMARCD3-204ENST00000460431 SPART-AS1P0CW21 52 aa11.78□□□□□ -0.52
SMARCD3-204ENST00000460431 CT45A10P0DMU9 189 aa11.78□□□□□ -0.52
SMARCD3-204ENST00000460431 TSPOP30536 169 aa11.78□□□□□ -0.52
SMARCD3-204ENST00000460431 EMP1P54849 157 aa11.78□□□□□ -0.52
SMARCD3-204ENST00000460431 TAS2R45P59539 299 aa11.78□□□□□ -0.52
SMARCD3-204ENST00000460431 ICAM4Q14773 271 aa11.78□□□□□ -0.52
SMARCD3-204ENST00000460431 KHDC3LQ587J8 217 aa11.78□□□□□ -0.52
SMARCD3-204ENST00000460431 Q6ZTC4 211 aa11.78□□□□□ -0.52
SMARCD3-204ENST00000460431 TMEM256Q8N2U0 113 aa11.78□□□□□ -0.52
SMARCD3-204ENST00000460431 HSD17B11Q8NBQ5 300 aa11.78□□□□□ -0.52
SMARCD3-204ENST00000460431 ODF3Q96PU9 254 aa11.78□□□□□ -0.52
SMARCD3-204ENST00000460431 PSMG3Q9BT73 122 aaPredicted RBP11.78□□□□□ -0.52
SMARCD3-204ENST00000460431 BIRC6Q9NR09 4857 aa11.77□□□□□ -0.52
SMARCD3-204ENST00000460431 KIR3DS1Q14943 382 aa11.77□□□□□ -0.53
SMARCD3-204ENST00000460431 OR2G3Q8NGZ4 309 aa11.77□□□□□ -0.53
SMARCD3-204ENST00000460431 C2CD4CQ8TF44 421 aa11.77□□□□□ -0.53
SMARCD3-204ENST00000460431 LINC00476Q8WZB0 136 aa11.77□□□□□ -0.53
SMARCD3-204ENST00000460431 DKK2Q9UBU2 259 aa11.77□□□□□ -0.53
SMARCD3-204ENST00000460431 ALMS1Q8TCU4 4167 aa11.76□□□□□ -0.53
SMARCD3-204ENST00000460431 TRAV10A0A0B4J240 114 aa11.76□□□□□ -0.53
SMARCD3-204ENST00000460431 A0A1W2PPV4 95 aa11.76□□□□□ -0.53
SMARCD3-204ENST00000460431 ZNF705GA8MUZ8 300 aaPredicted RBP11.76□□□□□ -0.53
SMARCD3-204ENST00000460431 PRM2P04554 102 aa11.76□□□□□ -0.53
SMARCD3-204ENST00000460431 ATP6V0CP27449 155 aa11.76□□□□□ -0.53
SMARCD3-204ENST00000460431 RAB2AP61019 212 aa11.76□□□□□ -0.53
SMARCD3-204ENST00000460431 UBE2L3P68036 154 aaKnown RBP11.76□□□□□ -0.53
SMARCD3-204ENST00000460431 SERF2P84101 59 aa11.76□□□□□ -0.53
SMARCD3-204ENST00000460431 ZNF767PQ75MW2 155 aa11.76□□□□□ -0.53
SMARCD3-204ENST00000460431 LYPD1Q8N2G4 141 aa11.76□□□□□ -0.53
SMARCD3-204ENST00000460431 OR10G4Q8NGN3 311 aa11.76□□□□□ -0.53
SMARCD3-204ENST00000460431 OR10G9Q8NGN4 311 aa11.76□□□□□ -0.53
SMARCD3-204ENST00000460431 OR10G7Q8NGN6 311 aa11.76□□□□□ -0.53
SMARCD3-204ENST00000460431 PHYHIPLQ96FC7 376 aa11.76□□□□□ -0.53
SMARCD3-204ENST00000460431 LINC00477Q96M19 166 aa11.76□□□□□ -0.53
SMARCD3-204ENST00000460431 LINC01587Q99440 93 aa11.76□□□□□ -0.53
SMARCD3-204ENST00000460431 C20orf144Q9BQM9 153 aa11.76□□□□□ -0.53
SMARCD3-204ENST00000460431 YTHDF2Q9Y5A9 579 aaKnown RBP11.76□□□□□ -0.53
SMARCD3-204ENST00000460431 TEX48A0A1B0GUV7 120 aa11.75□□□□□ -0.53
SMARCD3-204ENST00000460431 EIF3GO75821 320 aaKnown RBP eCLIP11.75□□□□□ -0.53
SMARCD3-204ENST00000460431 LEPP41159 167 aa11.75□□□□□ -0.53
SMARCD3-204ENST00000460431 TAS2R60P59551 318 aa11.75□□□□□ -0.53
SMARCD3-204ENST00000460431 RANP62826 216 aaKnown RBP11.75□□□□□ -0.53
SMARCD3-204ENST00000460431 ERCC8Q13216 396 aa11.75□□□□□ -0.53
SMARCD3-204ENST00000460431 FAM222AQ5U5X8 452 aa11.75□□□□□ -0.53
SMARCD3-204ENST00000460431 FAM122CQ6P4D5 195 aa11.75□□□□□ -0.53
SMARCD3-204ENST00000460431 PQLC2Q6ZP29 291 aa11.75□□□□□ -0.53
SMARCD3-204ENST00000460431 C9orf47Q6ZRZ4 202 aa11.75□□□□□ -0.53
SMARCD3-204ENST00000460431 AGPAT4-IT1Q9H0P7 198 aa11.75□□□□□ -0.53
SMARCD3-204ENST00000460431 BORCS7-ASMTA0A0B4J1R7 106 aa11.74□□□□□ -0.53
SMARCD3-204ENST00000460431 H7BYZ3 331 aa11.74□□□□□ -0.53
SMARCD3-204ENST00000460431 AZU1P20160 251 aa11.74□□□□□ -0.53
SMARCD3-204ENST00000460431 TCTAP57738 103 aa11.74□□□□□ -0.53
SMARCD3-204ENST00000460431 GFI1BQ5VTD9 330 aa11.74□□□□□ -0.53
SMARCD3-204ENST00000460431 RPL7L1Q6DKI1 246 aaKnown RBP11.74□□□□□ -0.53
SMARCD3-204ENST00000460431 FAM19A4Q96LR4 140 aa11.74□□□□□ -0.53
SMARCD3-204ENST00000460431 Q9H3A6 140 aa11.74□□□□□ -0.53
SMARCD3-204ENST00000460431 IGLL5B9A064 214 aa11.73□□□□□ -0.53
SMARCD3-204ENST00000460431 MBP02144 154 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms