RNA–Protein interactions for RNA: ENST00000460235.1

HDAC4-206, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 343 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-206ENST00000460235 CD7P09564 240 aa9.2□□□□□ -0.94
HDAC4-206ENST00000460235 UBE2G2P60604 165 aa9.2□□□□□ -0.94
HDAC4-206ENST00000460235 CLLU1Q5K131 121 aa9.2□□□□□ -0.94
HDAC4-206ENST00000460235 LINC00477Q96M19 166 aa9.2□□□□□ -0.94
HDAC4-206ENST00000460235 CLUHP3Q96NS8 147 aa9.2□□□□□ -0.94
HDAC4-206ENST00000460235 TMPRSS5Q9H3S3 457 aa9.2□□□□□ -0.94
HDAC4-206ENST00000460235 SAV1Q9H4B6 383 aaPredicted RBP9.2□□□□□ -0.94
HDAC4-206ENST00000460235 SMDT1Q9H4I9 107 aa9.2□□□□□ -0.94
HDAC4-206ENST00000460235 TRAV8-2A0A0B4J237 113 aa9.19□□□□□ -0.94
HDAC4-206ENST00000460235 C11orf94C9JXX5 98 aa9.19□□□□□ -0.94
HDAC4-206ENST00000460235 EIF3GO75821 320 aaKnown RBP eCLIP9.19□□□□□ -0.94
HDAC4-206ENST00000460235 AMBPP02760 352 aa9.19□□□□□ -0.94
HDAC4-206ENST00000460235 SNRPCP09234 159 aaKnown RBP9.19□□□□□ -0.94
HDAC4-206ENST00000460235 BCL2P10415 239 aa9.19□□□□□ -0.94
HDAC4-206ENST00000460235 TSPOP30536 169 aa9.19□□□□□ -0.94
HDAC4-206ENST00000460235 APOC4P55056 127 aa9.19□□□□□ -0.94
HDAC4-206ENST00000460235 ODF3L2Q3SX64 289 aa9.19□□□□□ -0.94
HDAC4-206ENST00000460235 TMEM78Q5T7P6 136 aa9.19□□□□□ -0.94
HDAC4-206ENST00000460235 MORN3Q6PF18 240 aaPredicted RBP9.19□□□□□ -0.94
HDAC4-206ENST00000460235 EXOC3-AS1Q8N2X6 119 aa9.19□□□□□ -0.94
HDAC4-206ENST00000460235 RNF182Q8N6D2 247 aa9.19□□□□□ -0.94
HDAC4-206ENST00000460235 OR8A1Q8NGG7 326 aa9.19□□□□□ -0.94
HDAC4-206ENST00000460235 PRR25Q96S07 402 aa9.19□□□□□ -0.94
HDAC4-206ENST00000460235 ATG101Q9BSB4 218 aa9.19□□□□□ -0.94
HDAC4-206ENST00000460235 NDFIP1Q9BT67 221 aa9.19□□□□□ -0.94
HDAC4-206ENST00000460235 C1QTNF4Q9BXJ3 329 aa9.19□□□□□ -0.94
HDAC4-206ENST00000460235 EIF5A2Q9GZV4 153 aaKnown RBP9.19□□□□□ -0.94
HDAC4-206ENST00000460235 EPDR1Q9UM22 224 aa9.19□□□□□ -0.94
HDAC4-206ENST00000460235 RBFOX3A6NFN3 312 aa9.18□□□□□ -0.94
HDAC4-206ENST00000460235 A8MZ25 164 aa9.18□□□□□ -0.94
HDAC4-206ENST00000460235 RGS13O14921 159 aa9.18□□□□□ -0.94
HDAC4-206ENST00000460235 NMBP08949 121 aa9.18□□□□□ -0.94
HDAC4-206ENST00000460235 HLA-DRB4P13762 266 aa9.18□□□□□ -0.94
HDAC4-206ENST00000460235 KRTAP10-11P60412 298 aa9.18□□□□□ -0.94
HDAC4-206ENST00000460235 MEF2BQ02080 365 aaPredicted RBP9.18□□□□□ -0.94
HDAC4-206ENST00000460235 PEA15Q15121 130 aa9.18□□□□□ -0.94
HDAC4-206ENST00000460235 ACTL10Q5JWF8 245 aa9.18□□□□□ -0.94
HDAC4-206ENST00000460235 CYB561D1Q8N8Q1 229 aa9.18□□□□□ -0.94
HDAC4-206ENST00000460235 SRD5A3Q9H8P0 318 aa9.18□□□□□ -0.94
HDAC4-206ENST00000460235 HLA-DRB4X5D2U9 266 aa9.18□□□□□ -0.94
HDAC4-206ENST00000460235 LOC102724200A0A096LPH7 203 aaPredicted RBP9.17□□□□□ -0.94
HDAC4-206ENST00000460235 KIR2DL5BA0A0G2JN68 375 aa9.17□□□□□ -0.94
HDAC4-206ENST00000460235 KIR2DL5BA0A0G2JPC4 375 aa9.17□□□□□ -0.94
HDAC4-206ENST00000460235 TRBV7-9A0A0J9YWB2 115 aa9.17□□□□□ -0.94
HDAC4-206ENST00000460235 A0A0J9YX75 114 aa9.17□□□□□ -0.94
HDAC4-206ENST00000460235 DIRC3C9JPN6 131 aa9.17□□□□□ -0.94
HDAC4-206ENST00000460235 UBE2CO00762 179 aa9.17□□□□□ -0.94
HDAC4-206ENST00000460235 CNN1P51911 297 aaKnown RBP9.17□□□□□ -0.94
HDAC4-206ENST00000460235 UBE2G1P62253 170 aa9.17□□□□□ -0.94
HDAC4-206ENST00000460235 HIST1H1AQ02539 215 aaPredicted RBP9.17□□□□□ -0.94
HDAC4-206ENST00000460235 IGFL4Q6B9Z1 124 aa9.17□□□□□ -0.94
HDAC4-206ENST00000460235 KIR2DL5AQ8N109 375 aa9.17□□□□□ -0.94
HDAC4-206ENST00000460235 Q8N1Y9 231 aa9.17□□□□□ -0.94
HDAC4-206ENST00000460235 OR4B1Q8NGF8 309 aa9.17□□□□□ -0.94
HDAC4-206ENST00000460235 KIR2DL5BQ8NHK3 375 aa9.17□□□□□ -0.94
HDAC4-206ENST00000460235 ODF3Q96PU9 254 aa9.17□□□□□ -0.94
HDAC4-206ENST00000460235 YTHDF2Q9Y5A9 579 aaKnown RBP9.17□□□□□ -0.94
HDAC4-206ENST00000460235 LENEPQ9Y5L5 61 aa9.17□□□□□ -0.94
HDAC4-206ENST00000460235 GGTLC3B5MD39 225 aa9.16□□□□□ -0.94
HDAC4-206ENST00000460235 H3BMM0 161 aa9.16□□□□□ -0.94
HDAC4-206ENST00000460235 M0R3E3 92 aa9.16□□□□□ -0.94
HDAC4-206ENST00000460235 PEX7O00628 323 aa9.16□□□□□ -0.94
HDAC4-206ENST00000460235 TCRAP04437 139 aa9.16□□□□□ -0.94
HDAC4-206ENST00000460235 LEPP41159 167 aa9.16□□□□□ -0.94
HDAC4-206ENST00000460235 AKR1C3P42330 323 aa9.16□□□□□ -0.94
HDAC4-206ENST00000460235 CCL20P78556 96 aa9.16□□□□□ -0.94
HDAC4-206ENST00000460235 HAGHQ16775 308 aa9.16□□□□□ -0.94
HDAC4-206ENST00000460235 SAPCD1Q5SSQ6 148 aa9.16□□□□□ -0.94
HDAC4-206ENST00000460235 C9orf47Q6ZRZ4 202 aa9.16□□□□□ -0.94
HDAC4-206ENST00000460235 APRG1Q8IVJ8 170 aa9.16□□□□□ -0.94
HDAC4-206ENST00000460235 FAM24BQ8N5W8 94 aa9.16□□□□□ -0.94
HDAC4-206ENST00000460235 DEFB125Q8N687 156 aa9.16□□□□□ -0.94
HDAC4-206ENST00000460235 FMC1Q96HJ9 113 aa9.16□□□□□ -0.94
HDAC4-206ENST00000460235 C20orf173Q96LM9 149 aa9.16□□□□□ -0.94
HDAC4-206ENST00000460235 FAM210AQ96ND0 272 aa9.16□□□□□ -0.94
HDAC4-206ENST00000460235 C19orf73Q9NVV2 129 aa9.16□□□□□ -0.94
HDAC4-206ENST00000460235 RPH3ALQ9UNE2 315 aa9.16□□□□□ -0.94
HDAC4-206ENST00000460235 MGAM2Q2M2H8 2515 aa9.16□□□□□ -0.94
HDAC4-206ENST00000460235 LOC102723971A0A1B0GUV8 181 aa9.15□□□□□ -0.94
HDAC4-206ENST00000460235 RAB19A4D1S5 217 aa9.15□□□□□ -0.94
HDAC4-206ENST00000460235 ZNF705FA8MVS1 300 aaPredicted RBP9.15□□□□□ -0.94
HDAC4-206ENST00000460235 NPIPB6E9PJ23 425 aa9.15□□□□□ -0.94
HDAC4-206ENST00000460235 TMEM250H0YL14 139 aa9.15□□□□□ -0.94
HDAC4-206ENST00000460235 ZNF138P52744 262 aa9.15□□□□□ -0.94
HDAC4-206ENST00000460235 IFITM2Q01629 132 aa9.15□□□□□ -0.94
HDAC4-206ENST00000460235 DEFB121Q5J5C9 76 aa9.15□□□□□ -0.94
HDAC4-206ENST00000460235 ZNF506Q5JVG8 444 aa9.15□□□□□ -0.94
HDAC4-206ENST00000460235 GOLT1AQ6ZVE7 132 aa9.15□□□□□ -0.94
HDAC4-206ENST00000460235 CCDC28AQ8IWP9 274 aa9.15□□□□□ -0.94
HDAC4-206ENST00000460235 TMEM75Q8N9X5 138 aa9.15□□□□□ -0.94
HDAC4-206ENST00000460235 AURKAIP1Q9NWT8 199 aaPredicted RBP9.15□□□□□ -0.94
HDAC4-206ENST00000460235 KNCNA6PVL3 124 aa9.14□□□□□ -0.95
HDAC4-206ENST00000460235 IGHV4-30-4P0DP06 118 aa9.14□□□□□ -0.95
HDAC4-206ENST00000460235 HLA-DMBP28068 263 aa9.14□□□□□ -0.95
HDAC4-206ENST00000460235 TRPT1Q86TN4 253 aaKnown RBP9.14□□□□□ -0.95
HDAC4-206ENST00000460235 CSTL1Q9H114 145 aa9.14□□□□□ -0.95
HDAC4-206ENST00000460235 BIN3Q9NQY0 253 aa9.14□□□□□ -0.95
HDAC4-206ENST00000460235 MED9Q9NWA0 146 aa9.14□□□□□ -0.95
HDAC4-206ENST00000460235 ZFP30Q9Y2G7 519 aa9.14□□□□□ -0.95
HDAC4-206ENST00000460235 ATP5G3P48201 142 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms