RNA–Protein interactions for RNA: ENST00000459994.2

SDF4-204, Transcript of stromal cell derived factor 4, humanhuman

TSL 5

Gene SDF4, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-204ENST00000459994 GBGT1Q8N5D6 347 aa11.55□□□□□ -0.56
SDF4-204ENST00000459994 SLC50A1Q9BRV3 221 aa11.55□□□□□ -0.56
SDF4-204ENST00000459994 TMPRSS5Q9H3S3 457 aa11.55□□□□□ -0.56
SDF4-204ENST00000459994 CLEC5AQ9NY25 188 aa11.55□□□□□ -0.56
SDF4-204ENST00000459994 ISLRO14498 428 aa11.54□□□□□ -0.56
SDF4-204ENST00000459994 RGS13O14921 159 aa11.54□□□□□ -0.56
SDF4-204ENST00000459994 SNRPCP09234 159 aaKnown RBP11.54□□□□□ -0.56
SDF4-204ENST00000459994 ID1P41134 155 aa11.54□□□□□ -0.56
SDF4-204ENST00000459994 PPT1P50897 306 aa11.54□□□□□ -0.56
SDF4-204ENST00000459994 RAB14P61106 215 aa11.54□□□□□ -0.56
SDF4-204ENST00000459994 CCL20P78556 96 aa11.54□□□□□ -0.56
SDF4-204ENST00000459994 PSG9Q00887 426 aa11.54□□□□□ -0.56
SDF4-204ENST00000459994 IQCF2Q8IXL9 164 aa11.54□□□□□ -0.56
SDF4-204ENST00000459994 LYPD1Q8N2G4 141 aa11.54□□□□□ -0.56
SDF4-204ENST00000459994 BLNKQ8WV28 456 aa11.54□□□□□ -0.56
SDF4-204ENST00000459994 ZNF331Q9NQX6 463 aaPredicted RBP11.54□□□□□ -0.56
SDF4-204ENST00000459994 ARL2-SNX15V9GYD0 113 aa11.54□□□□□ -0.56
SDF4-204ENST00000459994 TRAV8-2A0A0B4J237 113 aa11.53□□□□□ -0.56
SDF4-204ENST00000459994 H3BTX0 84 aa11.53□□□□□ -0.56
SDF4-204ENST00000459994 SLC17A3O00476 420 aa11.53□□□□□ -0.56
SDF4-204ENST00000459994 TFPI2P48307 235 aa11.53□□□□□ -0.56
SDF4-204ENST00000459994 CMC4P56277 68 aaPredicted RBP11.53□□□□□ -0.56
SDF4-204ENST00000459994 WFDC3Q8IUB2 231 aa11.53□□□□□ -0.56
SDF4-204ENST00000459994 C16orf92Q96LL3 132 aa11.53□□□□□ -0.56
SDF4-204ENST00000459994 A0A1B0GV50 99 aa11.52□□□□□ -0.57
SDF4-204ENST00000459994 A0A1W2PRE2 83 aa11.52□□□□□ -0.57
SDF4-204ENST00000459994 CLLU1Q5K131 121 aa11.52□□□□□ -0.57
SDF4-204ENST00000459994 HYDINQ4G0P3 5121 aa11.51□□□□□ -0.57
SDF4-204ENST00000459994 SNRPD3P62318 126 aaKnown RBP11.51□□□□□ -0.57
SDF4-204ENST00000459994 RANP62826 216 aaKnown RBP11.51□□□□□ -0.57
SDF4-204ENST00000459994 NKX6-2Q9C056 277 aaPredicted RBP11.51□□□□□ -0.57
SDF4-204ENST00000459994 AAMDCQ9H7C9 122 aa11.51□□□□□ -0.57
SDF4-204ENST00000459994 OTORQ9NRC9 128 aa11.51□□□□□ -0.57
SDF4-204ENST00000459994 PRELID1Q9Y255 219 aa11.51□□□□□ -0.57
SDF4-204ENST00000459994 DNAH1Q9P2D7 4330 aa11.51□□□□□ -0.57
SDF4-204ENST00000459994 FAM74A7A6NL05 159 aa11.5□□□□□ -0.57
SDF4-204ENST00000459994 IFNA1P01562 189 aa11.5□□□□□ -0.57
SDF4-204ENST00000459994 PSG3Q16557 428 aa11.5□□□□□ -0.57
SDF4-204ENST00000459994 FAM24BQ8N5W8 94 aa11.5□□□□□ -0.57
SDF4-204ENST00000459994 ARL6IP6Q8N6S5 226 aa11.5□□□□□ -0.57
SDF4-204ENST00000459994 PCNPQ8WW12 178 aaKnown RBP11.5□□□□□ -0.57
SDF4-204ENST00000459994 MRPL53Q96EL3 112 aaKnown RBP11.5□□□□□ -0.57
SDF4-204ENST00000459994 Q9H3A6 140 aa11.5□□□□□ -0.57
SDF4-204ENST00000459994 MANBALQ9NQG1 85 aa11.5□□□□□ -0.57
SDF4-204ENST00000459994 PAGE4O60829 102 aa11.49□□□□□ -0.57
SDF4-204ENST00000459994 ZNF688P0C7X2 276 aa11.49□□□□□ -0.57
SDF4-204ENST00000459994 TAGLN2P37802 199 aaKnown RBP11.49□□□□□ -0.57
SDF4-204ENST00000459994 ICAM4Q14773 271 aa11.49□□□□□ -0.57
SDF4-204ENST00000459994 GNG13Q9P2W3 67 aa11.49□□□□□ -0.57
SDF4-204ENST00000459994 YTHDF2Q9Y5A9 579 aaKnown RBP11.49□□□□□ -0.57
SDF4-204ENST00000459994 PGPA6NDG6 321 aa11.48□□□□□ -0.57
SDF4-204ENST00000459994 HLA-DMBP28068 263 aa11.48□□□□□ -0.57
SDF4-204ENST00000459994 UBE2G2P60604 165 aa11.48□□□□□ -0.57
SDF4-204ENST00000459994 ODF3L2Q3SX64 289 aa11.48□□□□□ -0.57
SDF4-204ENST00000459994 IGFL4Q6B9Z1 124 aa11.48□□□□□ -0.57
SDF4-204ENST00000459994 EXOC3-AS1Q8N2X6 119 aa11.48□□□□□ -0.57
SDF4-204ENST00000459994 RNF182Q8N6D2 247 aa11.48□□□□□ -0.57
SDF4-204ENST00000459994 RXFP4Q8TDU9 374 aa11.48□□□□□ -0.57
SDF4-204ENST00000459994 C20orf173Q96LM9 149 aa11.48□□□□□ -0.57
SDF4-204ENST00000459994 LINC00052Q96N35 136 aa11.48□□□□□ -0.57
SDF4-204ENST00000459994 TXNDC17Q9BRA2 123 aa11.48□□□□□ -0.57
SDF4-204ENST00000459994 MAP6D1Q9H9H5 199 aa11.48□□□□□ -0.57
SDF4-204ENST00000459994 LCE6AA0A183 80 aa11.47□□□□□ -0.57
SDF4-204ENST00000459994 GGTLC3B5MD39 225 aa11.47□□□□□ -0.57
SDF4-204ENST00000459994 BCL2P10415 239 aa11.47□□□□□ -0.57
SDF4-204ENST00000459994 DEFB131AP59861 70 aa11.47□□□□□ -0.57
SDF4-204ENST00000459994 SUMO1P63165 101 aaKnown RBP11.47□□□□□ -0.57
SDF4-204ENST00000459994 ZNF124Q15973 351 aa11.47□□□□□ -0.57
SDF4-204ENST00000459994 PSMG4Q5JS54 123 aa11.47□□□□□ -0.57
SDF4-204ENST00000459994 CST9LP1Q5W188 147 aa11.47□□□□□ -0.57
SDF4-204ENST00000459994 CCDC28AQ8IWP9 274 aa11.47□□□□□ -0.57
SDF4-204ENST00000459994 OVOL2Q9BRP0 275 aa11.47□□□□□ -0.57
SDF4-204ENST00000459994 TCEAL7Q9BRU2 100 aa11.47□□□□□ -0.57
SDF4-204ENST00000459994 M0R3E3 92 aa11.46□□□□□ -0.57
SDF4-204ENST00000459994 CSN1S1P47710 185 aa11.46□□□□□ -0.57
SDF4-204ENST00000459994 C5orf17Q8NAS9 161 aa11.46□□□□□ -0.57
SDF4-204ENST00000459994 ZNF738Q8NE65 137 aa11.46□□□□□ -0.57
SDF4-204ENST00000459994 RPUSD4Q96CM3 377 aaKnown RBP11.46□□□□□ -0.57
SDF4-204ENST00000459994 VAX2Q9UIW0 290 aa11.46□□□□□ -0.57
SDF4-204ENST00000459994 LOC102724200A0A096LPH7 203 aaPredicted RBP11.45□□□□□ -0.58
SDF4-204ENST00000459994 LOC102723971A0A1B0GUV8 181 aa11.45□□□□□ -0.58
SDF4-204ENST00000459994 RBFOX3A6NFN3 312 aa11.45□□□□□ -0.58
SDF4-204ENST00000459994 SLC25A5P05141 298 aaKnown RBP11.45□□□□□ -0.58
SDF4-204ENST00000459994 ZNF506Q5JVG8 444 aa11.45□□□□□ -0.58
SDF4-204ENST00000459994 CMTM2Q8TAZ6 248 aa11.45□□□□□ -0.58
SDF4-204ENST00000459994 FAM210AQ96ND0 272 aa11.45□□□□□ -0.58
SDF4-204ENST00000459994 EPDR1Q9UM22 224 aa11.45□□□□□ -0.58
SDF4-204ENST00000459994 ALMS1Q8TCU4 4167 aa11.45□□□□□ -0.58
SDF4-204ENST00000459994 ZNF705FA8MVS1 300 aaPredicted RBP11.44□□□□□ -0.58
SDF4-204ENST00000459994 C11orf94C9JXX5 98 aa11.44□□□□□ -0.58
SDF4-204ENST00000459994 NDUFS6O75380 124 aaKnown RBP11.44□□□□□ -0.58
SDF4-204ENST00000459994 ATP5G3P48201 142 aa11.44□□□□□ -0.58
SDF4-204ENST00000459994 MEF2BQ02080 365 aaPredicted RBP11.44□□□□□ -0.58
SDF4-204ENST00000459994 FOXI2Q6ZQN5 318 aa11.44□□□□□ -0.58
SDF4-204ENST00000459994 MED9Q9NWA0 146 aa11.44□□□□□ -0.58
SDF4-204ENST00000459994 PLECQ15149 4684 aaKnown RBP11.44□□□□□ -0.58
SDF4-204ENST00000459994 AGRNO00468 2067 aa11.44□□□□□ -0.58
SDF4-204ENST00000459994 SERTM2A0A1B0GWG4 89 aa11.43□□□□□ -0.58
SDF4-204ENST00000459994 DIRC3C9JPN6 131 aa11.43□□□□□ -0.58
SDF4-204ENST00000459994 PRAC2D3DTV9 90 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms