RNA–Protein interactions for RNA: ENST00000459783.5

MRPL55-223, Transcript of mitochondrial ribosomal protein L55, human

TSL 5 BASIC

Gene MRPL55, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-223	ENST00000459783	OR7C2	O60412	319 aa		7.43	□□□□□ -1.22
MRPL55-223	ENST00000459783	RBMY1A1	P0DJD3	496 aa	Known RBP	7.43	□□□□□ -1.22
MRPL55-223	ENST00000459783	RBMY1C	P0DJD4	496 aa		7.43	□□□□□ -1.22
MRPL55-223	ENST00000459783	UBE2L3	P68036	154 aa	Known RBP	7.43	□□□□□ -1.22
MRPL55-223	ENST00000459783	PSG9	Q00887	426 aa		7.43	□□□□□ -1.22
MRPL55-223	ENST00000459783	HIST1H1A	Q02539	215 aa	Predicted RBP	7.43	□□□□□ -1.22
MRPL55-223	ENST00000459783	PDE6H	Q13956	83 aa		7.43	□□□□□ -1.22
MRPL55-223	ENST00000459783	KIR3DS1	Q14943	382 aa		7.43	□□□□□ -1.22
MRPL55-223	ENST00000459783	RBMY1F	Q15415	496 aa	Known RBP	7.43	□□□□□ -1.22
MRPL55-223	ENST00000459783	LGALSL	Q3ZCW2	172 aa	Predicted RBP	7.43	□□□□□ -1.22
MRPL55-223	ENST00000459783	C1orf158	Q8N1D5	194 aa		7.43	□□□□□ -1.22
MRPL55-223	ENST00000459783		Q8NAQ8	132 aa		7.43	□□□□□ -1.22
MRPL55-223	ENST00000459783	OR11H2	Q8NH07	326 aa		7.43	□□□□□ -1.22
MRPL55-223	ENST00000459783	RAB24	Q969Q5	203 aa		7.43	□□□□□ -1.22
MRPL55-223	ENST00000459783	ARPC5L	Q9BPX5	153 aa		7.43	□□□□□ -1.22
MRPL55-223	ENST00000459783	DEFB4A	O15263	64 aa		7.42	□□□□□ -1.22
MRPL55-223	ENST00000459783	BCL2L11	O43521	198 aa		7.42	□□□□□ -1.22
MRPL55-223	ENST00000459783	C1QB	P02746	253 aa		7.42	□□□□□ -1.22
MRPL55-223	ENST00000459783	STAG3L2	P0CL84	134 aa		7.42	□□□□□ -1.22
MRPL55-223	ENST00000459783	STAG3L3	P0CL85	134 aa		7.42	□□□□□ -1.22
MRPL55-223	ENST00000459783	ARL14EPL	P0DKL9	152 aa		7.42	□□□□□ -1.22
MRPL55-223	ENST00000459783	CDC34	P49427	236 aa	Predicted RBP	7.42	□□□□□ -1.22
MRPL55-223	ENST00000459783	SERF2	P84101	59 aa		7.42	□□□□□ -1.22
MRPL55-223	ENST00000459783	ICAM4	Q14773	271 aa		7.42	□□□□□ -1.22
MRPL55-223	ENST00000459783	SPINK13	Q1W4C9	94 aa		7.42	□□□□□ -1.22
MRPL55-223	ENST00000459783	KHDC3L	Q587J8	217 aa		7.42	□□□□□ -1.22
MRPL55-223	ENST00000459783	ZNF705A	Q6ZN79	300 aa	Predicted RBP	7.42	□□□□□ -1.22
MRPL55-223	ENST00000459783	TMUB2	Q71RG4	321 aa		7.42	□□□□□ -1.22
MRPL55-223	ENST00000459783	BAP18	Q8IXM2	172 aa		7.42	□□□□□ -1.22
MRPL55-223	ENST00000459783	GNPNAT1	Q96EK6	184 aa	Predicted RBP	7.42	□□□□□ -1.22
MRPL55-223	ENST00000459783	RARRES2	Q99969	163 aa		7.42	□□□□□ -1.22
MRPL55-223	ENST00000459783	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	7.41	□□□□□ -1.22
MRPL55-223	ENST00000459783	IGHV4-28	A0A0C4DH34	117 aa		7.41	□□□□□ -1.22
MRPL55-223	ENST00000459783		A0A0D9SG52	128 aa		7.41	□□□□□ -1.22
MRPL55-223	ENST00000459783	NPIPB6	E9PJ23	425 aa		7.41	□□□□□ -1.22
MRPL55-223	ENST00000459783	BOLA2-SMG1P6	H3BVE0	249 aa		7.41	□□□□□ -1.22
MRPL55-223	ENST00000459783	JTB	O76095	146 aa		7.41	□□□□□ -1.22
MRPL55-223	ENST00000459783	DUSP14	O95147	198 aa	Known RBP	7.41	□□□□□ -1.22
MRPL55-223	ENST00000459783	IGKV2D-40	P01614	121 aa	Predicted RBP	7.41	□□□□□ -1.22
MRPL55-223	ENST00000459783	PRM2	P04554	102 aa		7.41	□□□□□ -1.22
MRPL55-223	ENST00000459783	CT45A10	P0DMU9	189 aa		7.41	□□□□□ -1.22
MRPL55-223	ENST00000459783	RAN	P62826	216 aa	Known RBP	7.41	□□□□□ -1.22
MRPL55-223	ENST00000459783	ERCC8	Q13216	396 aa		7.41	□□□□□ -1.22
MRPL55-223	ENST00000459783	TMEM41B	Q5BJD5	291 aa		7.41	□□□□□ -1.22
MRPL55-223	ENST00000459783	AKAP14	Q86UN6	197 aa		7.41	□□□□□ -1.22
MRPL55-223	ENST00000459783	MUC7	Q8TAX7	377 aa		7.41	□□□□□ -1.22
MRPL55-223	ENST00000459783	MRPL53	Q96EL3	112 aa	Known RBP	7.41	□□□□□ -1.22
MRPL55-223	ENST00000459783	KRTAP17-1	Q9BYP8	105 aa		7.41	□□□□□ -1.22
MRPL55-223	ENST00000459783		Q9H3A6	140 aa		7.41	□□□□□ -1.22
MRPL55-223	ENST00000459783	TRAV12-2	A0A075B6T6	113 aa		7.4	□□□□□ -1.22
MRPL55-223	ENST00000459783		A0A1W2PPV4	95 aa		7.4	□□□□□ -1.22
MRPL55-223	ENST00000459783	GCHFR	P30047	84 aa		7.4	□□□□□ -1.22
MRPL55-223	ENST00000459783	FHIT	P49789	147 aa		7.4	□□□□□ -1.22
MRPL55-223	ENST00000459783	TAS2R45	P59539	299 aa		7.4	□□□□□ -1.22
MRPL55-223	ENST00000459783	NUTF2	P61970	127 aa	Known RBP	7.4	□□□□□ -1.22
MRPL55-223	ENST00000459783	PQLC2	Q6ZP29	291 aa		7.4	□□□□□ -1.22
MRPL55-223	ENST00000459783	SUN5	Q8TC36	379 aa		7.4	□□□□□ -1.22
MRPL55-223	ENST00000459783	IGF2BP2-AS1	Q96M15	143 aa		7.4	□□□□□ -1.22
MRPL55-223	ENST00000459783	VGLL1	Q99990	258 aa		7.4	□□□□□ -1.22
MRPL55-223	ENST00000459783	ZNF471	Q9BX82	626 aa	Predicted RBP	7.4	□□□□□ -1.22
MRPL55-223	ENST00000459783	AGPAT4-IT1	Q9H0P7	198 aa		7.4	□□□□□ -1.22
MRPL55-223	ENST00000459783	MB	P02144	154 aa		7.39	□□□□□ -1.23
MRPL55-223	ENST00000459783	ZFAND6	Q6FIF0	208 aa		7.39	□□□□□ -1.23
MRPL55-223	ENST00000459783	C9orf62	Q8N4C0	152 aa		7.39	□□□□□ -1.23
MRPL55-223	ENST00000459783	IL17D	Q8TAD2	202 aa		7.39	□□□□□ -1.23
MRPL55-223	ENST00000459783	FAM19A4	Q96LR4	140 aa		7.39	□□□□□ -1.23
MRPL55-223	ENST00000459783	C1QTNF4	Q9BXJ3	329 aa		7.39	□□□□□ -1.23
MRPL55-223	ENST00000459783	C11orf68	Q9H3H3	251 aa	Known RBP	7.39	□□□□□ -1.23
MRPL55-223	ENST00000459783	TMPRSS5	Q9H3S3	457 aa		7.39	□□□□□ -1.23
MRPL55-223	ENST00000459783	PRELID1	Q9Y255	219 aa		7.39	□□□□□ -1.23
MRPL55-223	ENST00000459783	IGHV3OR16-12	A0A075B7B8	117 aa		7.38	□□□□□ -1.23
MRPL55-223	ENST00000459783	CTXND1	A0A1B0GTU2	59 aa		7.38	□□□□□ -1.23
MRPL55-223	ENST00000459783	KANTR	A0A1W2PQU2	76 aa		7.38	□□□□□ -1.23
MRPL55-223	ENST00000459783	SEC11B	P0C7V7	166 aa		7.38	□□□□□ -1.23
MRPL55-223	ENST00000459783	FGF8	P55075	233 aa	Predicted RBP	7.38	□□□□□ -1.23
MRPL55-223	ENST00000459783	GNG5	P63218	68 aa		7.38	□□□□□ -1.23
MRPL55-223	ENST00000459783	PRR9	Q5T870	116 aa		7.38	□□□□□ -1.23
MRPL55-223	ENST00000459783	GFI1B	Q5VTD9	330 aa		7.38	□□□□□ -1.23
MRPL55-223	ENST00000459783		Q6ZQT7	251 aa		7.38	□□□□□ -1.23
MRPL55-223	ENST00000459783	C9orf47	Q6ZRZ4	202 aa		7.38	□□□□□ -1.23
MRPL55-223	ENST00000459783	OR10J6P	Q8NGY7	276 aa		7.38	□□□□□ -1.23
MRPL55-223	ENST00000459783		Q8TAT8	98 aa		7.38	□□□□□ -1.23
MRPL55-223	ENST00000459783	STOML3	Q8TAV4	291 aa		7.38	□□□□□ -1.23
MRPL55-223	ENST00000459783	TMED6	Q8WW62	240 aa		7.38	□□□□□ -1.23
MRPL55-223	ENST00000459783	ACTR3C	Q9C0K3	210 aa	Predicted RBP	7.38	□□□□□ -1.23
MRPL55-223	ENST00000459783	AAMDC	Q9H7C9	122 aa		7.38	□□□□□ -1.23
MRPL55-223	ENST00000459783	OTOR	Q9NRC9	128 aa		7.38	□□□□□ -1.23
MRPL55-223	ENST00000459783	CELA1	Q9UNI1	258 aa		7.38	□□□□□ -1.23
MRPL55-223	ENST00000459783	PGP	A6NDG6	321 aa		7.37	□□□□□ -1.23
MRPL55-223	ENST00000459783	GGTLC3	B5MD39	225 aa		7.37	□□□□□ -1.23
MRPL55-223	ENST00000459783	PFDN1	O60925	122 aa		7.37	□□□□□ -1.23
MRPL55-223	ENST00000459783	MIF	P14174	115 aa		7.37	□□□□□ -1.23
MRPL55-223	ENST00000459783	AKR1C8P	Q5T2L2	129 aa		7.37	□□□□□ -1.23
MRPL55-223	ENST00000459783	CASC10	Q5T4H9	136 aa		7.37	□□□□□ -1.23
MRPL55-223	ENST00000459783	LYPD1	Q8N2G4	141 aa		7.37	□□□□□ -1.23
MRPL55-223	ENST00000459783	ZFAND2A	Q8N6M9	145 aa		7.37	□□□□□ -1.23
MRPL55-223	ENST00000459783	HYLS1	Q96M11	299 aa		7.37	□□□□□ -1.23
MRPL55-223	ENST00000459783	ODF3	Q96PU9	254 aa		7.37	□□□□□ -1.23
MRPL55-223	ENST00000459783	NEU1	Q99519	415 aa		7.37	□□□□□ -1.23
MRPL55-223	ENST00000459783	YTHDF2	Q9Y5A9	579 aa	Known RBP	7.37	□□□□□ -1.23

Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms