RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 SIGLEC15Q6ZMC9 328 aa6.85□□□□□ -1.31
VPS50-207ENST00000458530 LCNL1Q6ZST4 164 aa6.85□□□□□ -1.31
VPS50-207ENST00000458530 REC114Q7Z4M0 266 aa6.85□□□□□ -1.31
VPS50-207ENST00000458530 C1QL4Q86Z23 238 aa6.85□□□□□ -1.31
VPS50-207ENST00000458530 DPF1Q92782 380 aa6.85□□□□□ -1.31
VPS50-207ENST00000458530 ZNF414Q96IQ9 312 aa6.85□□□□□ -1.31
VPS50-207ENST00000458530 TUBA4BQ9H853 241 aa6.85□□□□□ -1.31
VPS50-207ENST00000458530 TMEM242Q9NWH2 141 aa6.85□□□□□ -1.31
VPS50-207ENST00000458530 IGHV3OR16-8A0A075B7F1 116 aa6.84□□□□□ -1.31
VPS50-207ENST00000458530 IGHV7-4-1A0A0J9YVY3 117 aa6.84□□□□□ -1.31
VPS50-207ENST00000458530 A0A1B0GUS0 222 aa6.84□□□□□ -1.31
VPS50-207ENST00000458530 CLPSL1A2RUU4 121 aa6.84□□□□□ -1.31
VPS50-207ENST00000458530 A8MWP6 167 aa6.84□□□□□ -1.31
VPS50-207ENST00000458530 LGALS9O00182 355 aa6.84□□□□□ -1.31
VPS50-207ENST00000458530 TSPAN4O14817 238 aa6.84□□□□□ -1.31
VPS50-207ENST00000458530 TCRAP04437 139 aa6.84□□□□□ -1.31
VPS50-207ENST00000458530 S100PP25815 95 aa6.84□□□□□ -1.31
VPS50-207ENST00000458530 TMEM183BQ1AE95 376 aa6.84□□□□□ -1.31
VPS50-207ENST00000458530 CENPWQ5EE01 88 aa6.84□□□□□ -1.31
VPS50-207ENST00000458530 LINC01551Q86U37 167 aa6.84□□□□□ -1.31
VPS50-207ENST00000458530 C15orf54Q8N8G6 183 aa6.84□□□□□ -1.31
VPS50-207ENST00000458530 MRPL53Q96EL3 112 aaKnown RBP6.84□□□□□ -1.31
VPS50-207ENST00000458530 BTF3L4Q96K17 158 aa6.84□□□□□ -1.31
VPS50-207ENST00000458530 OR5B12Q96R08 314 aa6.84□□□□□ -1.31
VPS50-207ENST00000458530 DERL1Q9BUN8 251 aa6.84□□□□□ -1.31
VPS50-207ENST00000458530 PEMTQ9UBM1 199 aa6.84□□□□□ -1.31
VPS50-207ENST00000458530 RPH3ALQ9UNE2 315 aa6.84□□□□□ -1.31
VPS50-207ENST00000458530 TRBV6-1A0A0K0K1D8 114 aa6.83□□□□□ -1.32
VPS50-207ENST00000458530 LINC01619G3V211 115 aa6.83□□□□□ -1.32
VPS50-207ENST00000458530 H7BYZ3 331 aa6.83□□□□□ -1.32
VPS50-207ENST00000458530 ZNF207O43670 478 aaKnown RBP6.83□□□□□ -1.32
VPS50-207ENST00000458530 FOXL1Q12952 345 aa6.83□□□□□ -1.32
VPS50-207ENST00000458530 C10orf99Q6UWK7 81 aa6.83□□□□□ -1.32
VPS50-207ENST00000458530 UNQ9165/PRO28630Q6UXU0 137 aa6.83□□□□□ -1.32
VPS50-207ENST00000458530 TMEM75Q8N9X5 138 aa6.83□□□□□ -1.32
VPS50-207ENST00000458530 KLHL30-AS1Q8NEE0 82 aa6.83□□□□□ -1.32
VPS50-207ENST00000458530 GLMPQ8WWB7 406 aa6.83□□□□□ -1.32
VPS50-207ENST00000458530 ISOC2Q96AB3 205 aa6.83□□□□□ -1.32
VPS50-207ENST00000458530 KLF12Q9Y4X4 402 aa6.83□□□□□ -1.32
VPS50-207ENST00000458530 H3BTX0 84 aa6.82□□□□□ -1.32
VPS50-207ENST00000458530 DNASE2O00115 360 aaPredicted RBP6.82□□□□□ -1.32
VPS50-207ENST00000458530 HOXD3P31249 432 aaPredicted RBP6.82□□□□□ -1.32
VPS50-207ENST00000458530 RPL19P84098 196 aaKnown RBP6.82□□□□□ -1.32
VPS50-207ENST00000458530 RNF212Q495C1 297 aa6.82□□□□□ -1.32
VPS50-207ENST00000458530 TMEM88Q6PEY1 159 aa6.82□□□□□ -1.32
VPS50-207ENST00000458530 KCNIP4Q6PIL6 250 aa6.82□□□□□ -1.32
VPS50-207ENST00000458530 GOLT1AQ6ZVE7 132 aa6.82□□□□□ -1.32
VPS50-207ENST00000458530 BAGE2Q86Y30 109 aa6.82□□□□□ -1.32
VPS50-207ENST00000458530 CBLN2Q8IUK8 224 aa6.82□□□□□ -1.32
VPS50-207ENST00000458530 EXOC3-AS1Q8N2X6 119 aa6.82□□□□□ -1.32
VPS50-207ENST00000458530 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.82□□□□□ -1.32
VPS50-207ENST00000458530 SFRP2Q96HF1 295 aa6.82□□□□□ -1.32
VPS50-207ENST00000458530 IGF2BP2-AS1Q96M15 143 aa6.82□□□□□ -1.32
VPS50-207ENST00000458530 NDFIP1Q9BT67 221 aa6.82□□□□□ -1.32
VPS50-207ENST00000458530 RHPN1-AS1Q9BWJ2 59 aa6.82□□□□□ -1.32
VPS50-207ENST00000458530 ZNF331Q9NQX6 463 aaPredicted RBP6.82□□□□□ -1.32
VPS50-207ENST00000458530 SMPXQ9UHP9 88 aa6.82□□□□□ -1.32
VPS50-207ENST00000458530 ZFP30Q9Y2G7 519 aa6.82□□□□□ -1.32
VPS50-207ENST00000458530 TSSC4Q9Y5U2 329 aaPredicted RBP6.82□□□□□ -1.32
VPS50-207ENST00000458530 TRBV20OR9-2A0A075B6H5 130 aa6.81□□□□□ -1.32
VPS50-207ENST00000458530 IGHV4OR15-8A0A075B7B6 117 aa6.81□□□□□ -1.32
VPS50-207ENST00000458530 A0A087WW49 117 aa6.81□□□□□ -1.32
VPS50-207ENST00000458530 IGHV3-66A0A0C4DH42 116 aa6.81□□□□□ -1.32
VPS50-207ENST00000458530 RBAKDNA6NC62 111 aa6.81□□□□□ -1.32
VPS50-207ENST00000458530 DIRC3C9JPN6 131 aa6.81□□□□□ -1.32
VPS50-207ENST00000458530 SLC17A3O00476 420 aa6.81□□□□□ -1.32
VPS50-207ENST00000458530 CHEK1O14757 476 aa6.81□□□□□ -1.32
VPS50-207ENST00000458530 SNRPCP09234 159 aaKnown RBP6.81□□□□□ -1.32
VPS50-207ENST00000458530 MGST1P10620 155 aaKnown RBP6.81□□□□□ -1.32
VPS50-207ENST00000458530 ID1P41134 155 aa6.81□□□□□ -1.32
VPS50-207ENST00000458530 GNG5P63218 68 aa6.81□□□□□ -1.32
VPS50-207ENST00000458530 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.81□□□□□ -1.32
VPS50-207ENST00000458530 Q86TA4 180 aa6.81□□□□□ -1.32
VPS50-207ENST00000458530 OR10G8Q8NGN5 311 aa6.81□□□□□ -1.32
VPS50-207ENST00000458530 OR1N2Q8NGR9 330 aa6.81□□□□□ -1.32
VPS50-207ENST00000458530 LINC01006Q8NI28 216 aa6.81□□□□□ -1.32
VPS50-207ENST00000458530 OCC1Q8TAD7 63 aa6.81□□□□□ -1.32
VPS50-207ENST00000458530 WIPF2Q8TF74 440 aaPredicted RBP6.81□□□□□ -1.32
VPS50-207ENST00000458530 C16orf92Q96LL3 132 aa6.81□□□□□ -1.32
VPS50-207ENST00000458530 IMMP2LQ96T52 175 aa6.81□□□□□ -1.32
VPS50-207ENST00000458530 NRN1Q9NPD7 142 aa6.81□□□□□ -1.32
VPS50-207ENST00000458530 RNF114Q9Y508 228 aa6.81□□□□□ -1.32
VPS50-207ENST00000458530 IGHV3OR16-13A0A075B7E8 117 aa6.8□□□□□ -1.32
VPS50-207ENST00000458530 IGHV3-49A0A0A0MS15 119 aa6.8□□□□□ -1.32
VPS50-207ENST00000458530 IGHV3-74A0A0B4J1X5 117 aa6.8□□□□□ -1.32
VPS50-207ENST00000458530 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.8□□□□□ -1.32
VPS50-207ENST00000458530 ISLRO14498 428 aa6.8□□□□□ -1.32
VPS50-207ENST00000458530 GCGP01275 180 aa6.8□□□□□ -1.32
VPS50-207ENST00000458530 LTAP01374 205 aa6.8□□□□□ -1.32
VPS50-207ENST00000458530 APOHP02749 345 aaPredicted RBP6.8□□□□□ -1.32
VPS50-207ENST00000458530 CT45A10P0DMU9 189 aa6.8□□□□□ -1.32
VPS50-207ENST00000458530 SYNJ2BPP57105 145 aa6.8□□□□□ -1.32
VPS50-207ENST00000458530 ERVFC1-1P60608 527 aa6.8□□□□□ -1.32
VPS50-207ENST00000458530 RPL11P62913 178 aaKnown RBP6.8□□□□□ -1.32
VPS50-207ENST00000458530 FLI1Q01543 452 aaPredicted RBP6.8□□□□□ -1.32
VPS50-207ENST00000458530 PSG3Q16557 428 aa6.8□□□□□ -1.32
VPS50-207ENST00000458530 TM4SF20Q53R12 229 aa6.8□□□□□ -1.32
VPS50-207ENST00000458530 SAPCD1Q5SSQ6 148 aa6.8□□□□□ -1.32
VPS50-207ENST00000458530 C17orf77Q96MU5 243 aa6.8□□□□□ -1.32
VPS50-207ENST00000458530 KRTAP9-2Q9BYQ4 174 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms